BGIOSGA017236

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Revision as of 04:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017236| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017236, complete gene.| tag = OS04G06...")
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Gene Name

BGIOSGA017236

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017236, complete gene.

LocusTag

OS04G0644800

Ensembl Transcript ID

BGIOSGA017236-TA

Ensembl Protein ID

BGIOSGA017236-PA

Length

4409

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31806094..31810502

Sequence Coding Region

31806094..31806341,31806457..31806657,31806779..31806956,31807897..31808159,31808308..31808548
,31808825..31809964,31810365..31810502

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31806094..31810502 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31806094..31810502 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCAAGGGACCAGTCATGTGGGGACGGCGGCGAGGTGGATCCGGAGGGTGGCATCGAGGCGCCACTCCTCTCCTCCGGCTCCTCGTTCTTCCAGGACCCGGCGCACGAGGACGGCGATGGCGACGAGGAGGCGCGACGGCGGCGGCGGAGGTTCCTCCTCGCCGGCCGCTCCCAGTCCAACACCACCTCCCAGGTGGCCCTCGTCGGCGTCGGCGTGTGCCCCATCGAGAGCCTCGACTACGAGTTGATCGAGAACGAAGTGTTCAAGCAGGACTGGAGGGCGCGGGGGCGGGGTCACATCCTGCGCTACGTGGCGCTCAAGTGGGCCCTCTGCTTCCTCGTCGGCGTCCTCTCCGCCGCCGCCGGATTCGTCGCCAACCTCGGCGTCGAGAACGTCGCCGGCGCCAAGTTCGTCGTCACCTCCAATCTCATGCTCGCCGGCAGATACGGGACAGCGTTTGCGGTGTTCCTGGTTTCGAATTTCGCCCTTACGATGTTAGCAACGGTGCTGACGGTGTATGTGGCGCCGGCGGCGGCCGGGTCGGGCATCCCTGAGGTGAAGGCTTACTTGAACGGGGTTGATGCCCCCGACATATTTTCTCTAAAGACCCTGGTGGTGAAGATTGTGGGTTGCATTGCTGCAGTATCATCATCATTGCATGTGGGAAAAGCTGGTCCTCTAGTACACACAGGTGCATGCATTGCATCTATACTTGGACAAGGTGGGTCAAGTAAATATCACCTGACATGTAAATGGCTAAGGTACTTCAAGAATGATAGGGACCGAAGGGACCTTGTTACTTGTGGTGCTGGTGCTGGTATTGCTGCTGCTTTCCGGGCACCAGTTGGTGGAGTCCTGTTTGCTCTTGAAGCAGTGTCTTCATGGTGGAGGAGTGCCCTACTCTGGCGAGCATTTTTCACAACAGCAATGGTTGCTGTTGTGCTTAGGGCATTGATAGACTTCTGCAAAAGTGACAAGTGTGGCTTGTTTGGGAAAGGTGGACTTATAATGTTTGATGTGACTTCAGATTACATCACCTACCATTTGGTCGATTTACCGCCAGTAATCACTCTAGGAGTTCTTGGTGGAGTACTGGGAAGCTTGCACAACTTTTTCCTGGACAAGCTTACTTTCAGGAAAGGGCAAAAGTACAAGCTGCTCCTGGCTGCAGTAGTCACCATTTGTACATCCTGTTGTCTCTTCGGCTTGCCATGGATTGCTTCTTGCAAACCTTGTCCAAGTGACACCGAAGAAGCCTGTCCATCCATAGGAAGATCTGGTAATTTTAAGAAGTATCAGTGTGCAATGAATGAGTACAATGACTTAGCTAGCCTGTTCTTCAACACCAACGATGACACCATTAGAAACCTTTACAGTGCTGGCACTGATGATGAATTCCATATCTCTTCAATACTTGTCTTCTTCTTCACATCGTATTTCCTGGGCATTTTCAGCTATGGCCTTGCTTTACCATCCGGCCTTTTTGTGCCAGTTATTTTGACAGGTGCAACTTATGGCCGCCTTGTTGGCATGTTAATTGGGTCCCAATCAACATTAGATCATGGCCTTTTTGCAGTTCTTGGCTCTGCTGCCCTTCTAGGAGGATCAATGAGAATGACTGTCTCAGTTTGTGTCGTCATCCTAGAGCTGACTAATAATTTACTTATGCTTCCTTTGGTTATGCTGGTCCTTCTCATATCGAAGACAGTGGCAGATGCTTTTAATGCAAATATTTATGATTTGCTTGTTAAATTGAAAGGATTTCCTTATCTCGAAGGCCATGTTGAACCTTACATGAGGCAATTGTCTGTCAGTGATGTTGTAACTGGTCCTCTACAGGCATTCAATGGCATAGAGAAGGTTGGCCATATAGTGCATGTCTTAAGGACAACTGGACATAATGGTTTTCCTGTTGTTGATGAGCCACCATTTTCAGATTCTCCTGTCTTATTTGGTCTAGTTCTTAGAGCCCACTTGCTTGTTCTGCTGAGAAAGAAAGATTTCATTCCTAACTGCTCAGCTTCAGCACTGGATGCTTCCAAGCAATTCTTGCCTCATGATTTTGCTAAACCTGGCTCAGGAAAGCATGACAGAATAGAGGAAATACAATTCAGTGCAGAAGAACTGGAAATGTTCGTAGATTTGCATCCGTTCACAAACACGTCTCCTTACACTGTGGTCGAGACTATGTCTTTGGCTAAGGCCCATGTGCTTTTCCGCGAAGTTGGATTGAGGCATCTTTTGGTTCTACCGAAATCGTCTAAGAGAGCGCCTGTTGTAGGCATACTGACAAGGCACGACTTCATGCCTGAGCATATATTGGGTCTTCATCCTTTCCTCTTCAAGACTAGATGGAAGAAGGTGCGGTTTGGCAAGTCAGCATTCACCAACCTCGTCTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAPRDQSCGDGGEVDPEGGIEAPLLSSGSSFFQDPAHEDGDGDEEARRRRRRFLLAGRSQSNTTSQVALVGVGVCPIESLDYELIENEVFKQDWRARGRGHILRYVALKWALCFLVGVLSAAAGFVANLGVENVAGAKFVVTSNLMLAGRYGTAFAVFLVSNFALTMLATVLTVYVAPAAAGSGIPEVKAYLNGVDAPDIFSLKTLVVKIVGCIAAVSSSLHVGKAGPLVHTGACIASILGQGGSSKYHLTCKWLRYFKNDRDRRDLVTCGAGAGIAAAFRAPVGGVLFALEAVSSWWRSALLWRAFFTTAMVAVVLRALIDFCKSDKCGLFGKGGLIMFDVTSDYITYHLVDLPPVITLGVLGGVLGSLHNFFLDKLTFRKGQKYKLLLAAVVTICTSCCLFGLPWIASCKPCPSDTEEACPSIGRSGNFKKYQCAMNEYNDLASLFFNTNDDTIRNLYSAGTDDEFHISSILVFFFTSYFLGIFSYGLALPSGLFVPVILTGATYGRLVGMLIGSQSTLDHGLFAVLGSAALLGGSMRMTVSVCVVILELTNNLLMLPLVMLVLLISKTVADAFNANIYDLLVKLKGFPYLEGHVEPYMRQLSVSDVVTGPLQAFNGIEKVGHIVHVLRTTGHNGFPVVDEPPFSDSPVLFGLVLRAHLLVLLRKKDFIPNCSASALDASKQFLPHDFAKPGSGKHDRIEEIQFSAEELEMFVDLHPFTNTSPYTVVETMSLAKAHVLFREVGLRHLLVLPKSSKRAPVVGILTRHDFMPEHILGLHPFLFKTRWKKVRFGKSAFTNLVF</aaseq>

Gene Sequence

<dnaseqindica>1..248#364..564#686..863#1804..2066#2215..2455#2732..3871#4272..4409#ATGGCGCCAAGGGACCAGTCATGTGGGGACGGCGGCGAGGTGGATCCGGAGGGTGGCATCGAGGCGCCACTCCTCTCCTCCGGCTCCTCGTTCTTCCAGGACCCGGCGCACGAGGACGGCGATGGCGACGAGGAGGCGCGACGGCGGCGGCGGAGGTTCCTCCTCGCCGGCCGCTCCCAGTCCAACACCACCTCCCAGGTGGCCCTCGTCGGCGTCGGCGTGTGCCCCATCGAGAGCCTCGACTACGAGTACGGCGCCCCCCTCACTTTTCCCTTCCCAATTCGAGGCGCGCGATTCGCTCGCTCGGTTTTCCATTTGCGATTTGACTCCATGGAAAACGCGGTGTTCGTGGGGGTGCTGCAGGTTGATCGAGAACGAAGTGTTCAAGCAGGACTGGAGGGCGCGGGGGCGGGGTCACATCCTGCGCTACGTGGCGCTCAAGTGGGCCCTCTGCTTCCTCGTCGGCGTCCTCTCCGCCGCCGCCGGATTCGTCGCCAACCTCGGCGTCGAGAACGTCGCCGGCGCCAAGTTCGTCGTCACCTCCAATCTCATGCTCGCCGGCAGGTAAGCAGCGGTTGCAGAGTGGTTTCTACTTCAGAGTTCAGACTAGGTTGGATTCAGTTTGAGTAACTGATGGACTTTACTTCTCGTGTTGTCTGTGTTGACTCAAAATTGATTTGATCAGATACGGGACAGCGTTTGCGGTGTTCCTGGTTTCGAATTTCGCCCTTACGATGTTAGCAACGGTGCTGACGGTGTATGTGGCGCCGGCGGCGGCCGGGTCGGGCATCCCTGAGGTGAAGGCTTACTTGAACGGGGTTGATGCCCCCGACATATTTTCTCTAAAGACCCTGGTGGTGAAGGTAGACTACTGTTATATCTCTTTCATTCAAGTTATTTCATCACAGAGTACTGGTAATTCTTGACACTTATTAGTTGTCCCTGTGATTTTTTTTCCAAGAAGAAGTTGTCTCTGTGATTGATTTGTGGCATACATATATCTAGTCTTTTGTTCCATTCTGTTTTTGTTCAACATCATTGGAGACGATTTAAATAAGTTGAAAATGTTGGTCTGTTAGACATGATCAGGTTTGTATGGGCTAAGAAATCATGTATATATAACTACGAATAATATGCATGGAAGAGTTAGGAAATACACATTGTTTGGTCTCTGGCAGGACATCAGTGTCTGTGTCTGTGGTACAACTTGTTTGTTATTCATTTTGGAGCAGCTCTATTGACTGTTGGACATGTATATATAGTTTGCGATGTAACTCTATGTTCATTTCAAAAGCAGAATTTAGAACCTGGCAATTAGTATTGAGTTCTGTGTCATCTGGAGATTTTCCCCGTTCCTTCTCTCTTGACCAATTGTCATCTCGGTGAAGCATGACTCTTTGTTTGCTTTCTTTAGTTTTCCATCTCAGACAAATGCAGGGCAATCTTTTTCATTTTAATTTCTGATGTTTTTAAGGGAAACAAAGAATGCATTTAGAAGAATTGGGGTATGAAACCTTTTAGTTTTTGGATTAGTTCTGATGTATTGACATAACCTTTGCATAAGAAAGATCATGCCTATCTTATTCTGCTTGAATGTCGGGGTTCAATTTGGAGATGCTAAAACGATTCTGAATGATTGGTTTTACTCAAAGTGAACATGACTGCCCAACCACTCTAGGGCAATGGTAGCTAGAAAATATGTTCTCTGACTTATACATAAGTGATAAATTGTTATGCAAGAAAAACACCATTGTTCCCTTCCGTTGATATATCTGGATTTCATATATACTGTTTTTTGGACAGATTGTGGGTTGCATTGCTGCAGTATCATCATCATTGCATGTGGGAAAAGCTGGTCCTCTAGTACACACAGGTGCATGCATTGCATCTATACTTGGACAAGGTGGGTCAAGTAAATATCACCTGACATGTAAATGGCTAAGGTACTTCAAGAATGATAGGGACCGAAGGGACCTTGTTACTTGTGGTGCTGGTGCTGGTATTGCTGCTGCTTTCCGGGCACCAGTTGGTGGAGTCCTGTTTGCTCTTGAAGCAGTGTCTTCATGGTAACAACTTTGAATATGCATGTGAAAACTCCTTGTTCTTTTCTGTTACTAATTAAAATGTGAACCACACAATTTCTGCAAGACGATACCATTCATATACAGTGTTTTGTTTACAATACCATTAGCTCCTTTTTTGCTTTCTTTGCAGGTGGAGGAGTGCCCTACTCTGGCGAGCATTTTTCACAACAGCAATGGTTGCTGTTGTGCTTAGGGCATTGATAGACTTCTGCAAAAGTGACAAGTGTGGCTTGTTTGGGAAAGGTGGACTTATAATGTTTGATGTGACTTCAGATTACATCACCTACCATTTGGTCGATTTACCGCCAGTAATCACTCTAGGAGTTCTTGGTGGAGTACTGGGAAGCTTGCACAACTTTTTCCTGGACAAGGTTCTTCGTCTCTACAATTTTATTAACGAGTATGTACTGCTGTTGGCTTAATGTTAATGATCTTCACTTCTGTAATTTTAAACTGCAGGCGTTTCATATTTCCATTTCCCAAAGCTTTAGCTGACATGCACACATTACTTCCCTGTACTTTATTAAAACTGTTTTTAAAAAATGGCAAAGTACACCTACTGGCATATTGCAGTTATCTGTTAGACTTGCGCATCCTTTTTGAAGTGAAATATATCCCTAAAATAACTTGCCATGTAACCTCTTCAGCTTACTTTCAGGAAAGGGCAAAAGTACAAGCTGCTCCTGGCTGCAGTAGTCACCATTTGTACATCCTGTTGTCTCTTCGGCTTGCCATGGATTGCTTCTTGCAAACCTTGTCCAAGTGACACCGAAGAAGCCTGTCCATCCATAGGAAGATCTGGTAATTTTAAGAAGTATCAGTGTGCAATGAATGAGTACAATGACTTAGCTAGCCTGTTCTTCAACACCAACGATGACACCATTAGAAACCTTTACAGTGCTGGCACTGATGATGAATTCCATATCTCTTCAATACTTGTCTTCTTCTTCACATCGTATTTCCTGGGCATTTTCAGCTATGGCCTTGCTTTACCATCCGGCCTTTTTGTGCCAGTTATTTTGACAGGTGCAACTTATGGCCGCCTTGTTGGCATGTTAATTGGGTCCCAATCAACATTAGATCATGGCCTTTTTGCAGTTCTTGGCTCTGCTGCCCTTCTAGGAGGATCAATGAGAATGACTGTCTCAGTTTGTGTCGTCATCCTAGAGCTGACTAATAATTTACTTATGCTTCCTTTGGTTATGCTGGTCCTTCTCATATCGAAGACAGTGGCAGATGCTTTTAATGCAAATATTTATGATTTGCTTGTTAAATTGAAAGGATTTCCTTATCTCGAAGGCCATGTTGAACCTTACATGAGGCAATTGTCTGTCAGTGATGTTGTAACTGGTCCTCTACAGGCATTCAATGGCATAGAGAAGGTTGGCCATATAGTGCATGTCTTAAGGACAACTGGACATAATGGTTTTCCTGTTGTTGATGAGCCACCATTTTCAGATTCTCCTGTCTTATTTGGTCTAGTTCTTAGAGCCCACTTGCTTGTTCTGCTGAGAAAGAAAGATTTCATTCCTAACTGCTCAGCTTCAGCACTGGATGCTTCCAAGCAATTCTTGCCTCATGATTTTGCTAAACCTGGCTCAGGAAAGCATGACAGAATAGAGGAAATACAATTCAGTGCAGAAGAACTGGAAATGTTCGTAGATTTGCATCCGTTCACAAACACGTCTCCTTACACTGTGGTCGAGACTATGTCTTTGGCTAAGGCCCATGTGCTTTTCCGCGAAGTTGGATTGAGGCATCTTTTGGTTCTACCGAAATCGTCTAAGGTTAGTGATACTATTCACAAATATATTTTTTTTGTCGGATTCTTCTTCATTCTACTTTTTATTTCCTTTGCTTTGTCTAGATAGGTCTAGCTATTTTGCAATCGTCAGTGTCTATTACCTTTTAGAAATGCCTTTTTAGAACCAAAGGGTGATAGGCTGATAGCATTGGCACCCCTGTTTCACTTTTATATTGGCAAATGTTGCTTCCAAGTTCCAACCATGACCGTTGCTAAGACAAACCAAGATGATTAGTGGCAAAAATCTCTAAATAGCCATACATATTCTTCTTGGTTACTAGCAGCATTATCGCTTTCATTGCTCATGACAGTATTTGAAATTATAAAACTTTCTAATAATTAACAGTGATAAATCTTTGACTGGTTAATTCCTATCAATGCAGAGAGCGCCTGTTGTAGGCATACTGACAAGGCACGACTTCATGCCTGAGCATATATTGGGTCTTCATCCTTTCCTCTTCAAGACTAGATGGAAGAAGGTGCGGTTTGGCAAGTCAGCATTCACCAACCTCGTCTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017236