BGIOSGA017256

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Revision as of 04:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017256| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017256, complete gene.| tag = H0212B0...")
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Gene Name

BGIOSGA017256

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017256, complete gene.

LocusTag

H0212B02.17

Ensembl Transcript ID

BGIOSGA017256-TA

Ensembl Protein ID

BGIOSGA017256-PA

Length

4187

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32191969..32196155

Sequence Coding Region

32191969..32192929,32195056..32195178,32195258..32195328,32195584..32195667,32196102..32196155

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32191969..32196155 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32191969..32196155 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCAGCTTTCCTCCTCATGCCCTGCAAAGATTGGCACCATGGTTGTTGTTGTTGTTGGGGCTCTGCTGTTTCATCTCGTAGTGACAGCATTGGCCGCGCCGGTAGCCTTGCCTGGCTGCCCCGAGACCTGCGGCAACGTCACCGTCCCTTACCCTTTCGGCATTGGCCACGGCTGCTTCCGCGATGGCTTCGAGCTCGCCTGCGACGAGACGCACCCTGCTGCACCACCGAAGCTGCGTTTCGCAAGAAACGGCGTGGAAGTGATCGACATCTCCCTGCCGTCCGGAACGGTGAGAGTCGCCACCAGGATGCTGGGCACGGGCTCCTCGTCGTCGCTGCCGCGGCAGCTCAACGGCTCGTGGCCGGCCGGCCTGCCGGCAAATGGCTCCCTGGCGGTGTCGACCAGGCACAACCGGTTCGTCGCCATGGGCTGCAACCTCCTCGCCAACCTCGTCGCCAACGACGACGACGACTACATCAGCGTCTGCGCCGCGCTGTGCGTGGTCCGATCCGCGCTGCCGAGGGACGCCGCCGCCGCCTCAAGCTGCTCCGGCTTCGGCTGCTGCCAGACACCGGTGGCGAGGGGCCTCCCGTCCTACGGCGTCCACCTCAACGACCTGACCCAGAGGTCGGTCACCGTGGGGTCGTACGGGGCGGCGTTCATCGCCGACGGCGAGTGGTTCGCCGGCGAGCAACGCTCCCTGCAGCTCGGCTTCGTCGCTGACCCGCGGAAGCTGGCCGACTCGACGGCGGTCCCGACGGTGCTGGAGTGGTCGCTGGACATGGACCGCGATCAGGACATGTTCTGGTACGACACCAGGGTCTCTCAATGGACGCGATGTGTCAGCGTGCACAGCGCCATCGACGACGCTGTTGACGGGAACCTTTACGGCCGAGCACGGTGCAATTGCTCCAAAGGATACGAGGGAAACCCTTACCTAGCCAATGGATGCCAAGGTAATTGTGTTCTTCAAATTGGGGTTGCTGCTGGCTCTCCAGAGGATGGTAATGCAGTTATGGTGGATGCACAGAAGTTCATGCAAGGTTCCCTTTATAGAAGTGCCATGGAATCCAAGAAGCAATCTTACCTAGCAAATCTTGCCTTATATCCTGGAAGGACTGAACTACCATTCTTCCCAGCTAACACGCAGGCCCTAATATTGCAACCAATTGGTGATAAAGGAATTGCAGTTATTGGTGGTGACACTATAAGGGGGTTCACTAATCTTGATCAGGCATGGATTGCAATGATAGCAGATAAACTGGATGCTACATTGTCAAAGTCGTAA</cdnaseq>

Protein Sequence

<aaseq>MKQLSSSCPAKIGTMVVVVVGALLFHLVVTALAAPVALPGCPETCGNVTVPYPFGIGHGCFRDGFELACDETHPAAPPKLRFARNGVEVIDISLPSGTVRVATRMLGTGSSSSLPRQLNGSWPAGLPANGSLAVSTRHNRFVAMGCNLLANLVANDDDDYISVCAALCVVRSALPRDAAAASSCSGFGCCQTPVARGLPSYGVHLNDLTQRSVTVGSYGAAFIADGEWFAGEQRSLQLGFVADPRKLADSTAVPTVLEWSLDMDRDQDMFWYDTRVSQWTRCVSVHSAIDDAVDGNLYGRARCNCSKGYEGNPYLANGCQGNCVLQIGVAAGSPEDGNAVMVDAQKFMQGSLYRSAMESKKQSYLANLALYPGRTELPFFPANTQALILQPIGDKGIAVIGGDTIRGFTNLDQAWIAMIADKLDATLSKS</aaseq>

Gene Sequence

<dnaseqindica>1..961#3088..3210#3290..3360#3616..3699#4134..4187#ATGAAGCAGCTTTCCTCCTCATGCCCTGCAAAGATTGGCACCATGGTTGTTGTTGTTGTTGGGGCTCTGCTGTTTCATCTCGTAGTGACAGCATTGGCCGCGCCGGTAGCCTTGCCTGGCTGCCCCGAGACCTGCGGCAACGTCACCGTCCCTTACCCTTTCGGCATTGGCCACGGCTGCTTCCGCGATGGCTTCGAGCTCGCCTGCGACGAGACGCACCCTGCTGCACCACCGAAGCTGCGTTTCGCAAGAAACGGCGTGGAAGTGATCGACATCTCCCTGCCGTCCGGAACGGTGAGAGTCGCCACCAGGATGCTGGGCACGGGCTCCTCGTCGTCGCTGCCGCGGCAGCTCAACGGCTCGTGGCCGGCCGGCCTGCCGGCAAATGGCTCCCTGGCGGTGTCGACCAGGCACAACCGGTTCGTCGCCATGGGCTGCAACCTCCTCGCCAACCTCGTCGCCAACGACGACGACGACTACATCAGCGTCTGCGCCGCGCTGTGCGTGGTCCGATCCGCGCTGCCGAGGGACGCCGCCGCCGCCTCAAGCTGCTCCGGCTTCGGCTGCTGCCAGACACCGGTGGCGAGGGGCCTCCCGTCCTACGGCGTCCACCTCAACGACCTGACCCAGAGGTCGGTCACCGTGGGGTCGTACGGGGCGGCGTTCATCGCCGACGGCGAGTGGTTCGCCGGCGAGCAACGCTCCCTGCAGCTCGGCTTCGTCGCTGACCCGCGGAAGCTGGCCGACTCGACGGCGGTCCCGACGGTGCTGGAGTGGTCGCTGGACATGGACCGCGATCAGGACATGTTCTGGTACGACACCAGGGTCTCTCAATGGACGCGATGTGTCAGCGTGCACAGCGCCATCGACGACGCTGTTGACGGGAACCTTTACGGCCGAGCACGGTGCAATTGCTCCAAAGGATACGAGGGAAACCCTTACCTAGCCAATGGATGCCAAGGTATGTACAGACTACAGTTCAGCGATTAATTACCCGACGATTAGTTAGTTAAATATACAATCTGAAAGTTTTTCAACCAAAAAACTGTTGTGTACTATAGTTACTCTTTTGATGGACCAGATTGTGGTCCATGTGTGGATGGGCCAGATTGTGAATAAGCTGGGACTTTGGCCCATCCAGATAAGCTTACGTGGGCTGGGCCTTTGCTTAACCAGCTGGTTTAAACTGGGAAATACGAGCTACTGGATTTTGGTCCCTTATGAAAGAAAAACTTTAATTACATATTCCTCGCCAGGGCCCAAAAACCTCATGCATACTTCCTTCGTTTTGTTTTCCAAAAAGGAAAAAGTACACCTAGGGTCCCTCAACTTGTCATCGAGTTACAAAATCGTCCCTCAACCGGAAAAATATATGACATCCCATGAAAACCGTTCACTTTAGGTTTTTTTGGTGGTTTTGATCCCGGTTTTATCCTATATGGCGGCTGAGTCAACGTGGGAATCACGTAGACCCCACATGTCAGGATGCCATGTCATCTCTTCTTTATTCCCTTTTTCTCTTGTCTTCTTCAGCGGGTAGGCGACGCCGTGACGGGCCGAGACGGGCGCGCGGGCGAAGCATGGGCCGGCGGCCGAAGCGGAGCAGGGGGCGGGCGCCGCCGGATTTGGGCGGCGACGGGGCGCCACCAGCAGCCGCCGCCGCGCTCGCCCACCGCCACCGCGCTCGCCTGCCATAGCTGCTCTCGCCCGCCACACCTGCCTGCTTCGCCCGCCGCCGCTCTCGCCCGATCCGCCGCCTGTCACGCTCGTCAACTGCGCCGAGCGGATCTGGAGGAAGAGTGAGGGGAGAGCCAAATGTGCGCGCGCGTAGCCGGCAATGGCGTCGTCGTGTGACCCAAACTCCCCTAGCCCGGAGGAATAGCGACATCAGCCGTACGTCGCCGAGGACTGCCGCGGCGCACTGCAGCTGCTCAGCGACGACACGAACGGTCGTCCGTGCAGCGGCGCCGTCTTTCGCCCACGACGAGTCGACGACAACAACGCCGACGATTGGATTGGCTAGCTTGTACTGCATCGTCATGGCGTCCTCTTCTTCGGCGGCTGAGGCGGCGGCGAGATGGGTCCGTCAGCGAGATCAACTGCATCCATGTCCATGCGTGCAAGCTTGCTACTACTAGCTAAAACTCACCGGACTTCAATGGCGGGGCGTTGCCACCAGAGGTAGAAGTAAAAAGACGAAGACGTCGGCGTGGGTCCAGTGGGCGGCGGGCTTGTTGATGGAGGCGGCGCAGACGATCCGGTCGGCGACGCGGTGGCGCAGCGGGTGGTCGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCAACCGTGCGGTTTCCGGCATTGCGGCTGTCGCCGACGCCTCCAGGTCATCCTGTGGGTGCAGAGCCACCCCAAGAAATGCCCCCATTTTGCGCTCGTCTTGGATTGGATTTATGATTACTGACCAATTGGTTAATTTGATCTTCATCTCAATAGTTCGCAGTCAAGGGCTGACATACTGACTCTTGCTCTCTCCGTAACTGATATTCTTGCTGGCCTTGTTTGGTTGTCCATCCGGCCGAAATCCATTTCTCCTGTGAGTTTTTTATCCTTTGCGGCATATTACTGTAGTAAATTTTTTACAATAATTCCTCATTTTGAAATGATCTTAGGTTGTTCCTCGAGGTGTCGAGTGCAAACGGGTAGGAACGGGTGTATTGGACTCGGCTCTTCGTGAACTACTTTGGTAACCATTTTACTGATACACTTCCTGCTTATTTCAATCTTAAGATCTTATTTTAATTCATAGAGATCATGGAAGCTCAAATAATGAAATATTATTACTTAAAAACCTCGCTAGGTGTTCCATACCGTGATTCTATATAATTACTAGTGCTATGATCTTCCATGAACATAACTAAACAAATCTTTCAGTTTTATGCATACACAATCCCATCCATGTACTTCATGTCAAGGAAATTATGTTGTGAGGCTGGCTGTGACTTCAACTTCTCACAAATAGGACATGGGATTCCCTTACAACTGCAACTTGTTGCAAATCCTTGGTTGTTGTGTATGGAGGTAATTGTGTTCTTCAAATTGGGGTTGCTGCTGGCTCTCCAGAGGATGGTAATGCAGTTATGGTGGATGCACAGAAGTTCATGCAAGGTTCCCTTTATAGAAGTGCCATGGAATCCAAGAAGCGTGAGTGTCTTTTGTTACTTATAAAGTTCTTTTTTTCTGTTTGATTTCATTCAGAAACTTCACTTTGGTCTTCTTGCAGAATCTTACCTAGCAAATCTTGCCTTATATCCTGGAAGGACTGAACTACCATTCTTCCCAGCTAACACGCAGGTACTAAAAAATCTTTCATCTTAGAGAAATTACATGTAAGCACGCATTGGTGTGTTTGTCAACTTGTTATACTTCACGAAAGCTGATCATACCATCTTTAAACTAGGAAACTCCAGAATGCATCCTCTCTTTTGTTTCATTGAAAAAGAAGGGGGAAATCTTATTAAGTCTAAAGATGACTGCATTCAACATTCAGATGAATTAATTGTATGAATGTTTAAAACCAAAGCTTTTGATATCTTCCCTGATATACAGGCCCTAATATTGCAACCAATTGGTGATAAAGGAATTGCAGTTATTGGTGGTGACACTATAAGGGGGTTCACTAATCTTGATCAGGTGCTATTTCTAATCTACAGCCTCCTAACATATATAGTACCACGTTTTGTTTTGGGTGATTCGCACAGATAATACAGAGAAAAACAATCTATATGTGTAAGCTAAAGATCACAGTTTTTAAAAACAAACACAAGCCAAAACTAGGTCAACTAAATGCTTAACATTGGTTTTATGCTCACTTTTGCTGAAGCATACAATCTCTACGGTGTGTGTTTGCATTGGAGCATTTGAAGTATTGACGGTGAGATCTTGCATTATTTGCATTGCAGCTACATTATTGCTTTTGAGAGCACAAAAGACCGAATGTAATGAAAAGCCTGTTGGTTGTAGGTTGCACACTTGCACTGTTTTAAATTCAGTATGACGGTTACTGTAAAAAAAAAATCAGTATGACAGTAGAGAGACAACCATTATCCTGTTGATTTTCCTTGCAGGCATGGATTGCAATGATAGCAGATAAACTGGATGCTACATTGTCAAAGTCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017256