BGIOSGA017258

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Revision as of 04:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017258| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017258, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA017258

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017258, complete gene.

LocusTag

OSIGBA0113E10.15

Ensembl Transcript ID

BGIOSGA017258-TA

Ensembl Protein ID

BGIOSGA017258-PA

Length

5153

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32232533..32237685

Sequence Coding Region

32232533..32232727,32233656..32233739,32233892..32233957,32234429..32234512,32234665..32234730
,32235033..32235098,32235377..32235436,32235515..32235598,32235678..32235821
,32236262..32236296,32236404..32236456,32236537..32236637,32237227..32237685

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32232533..32237685 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32232533..32237685 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGCGTAAGCCCGCCGCGTCGGAGGGTGGTTGGGGAAGCGACGCCGACCCCGACTCCGGGAGCTCCGGCAATGGCGGTGGCGGAGGTTCGCCGCCGTCGTCGCCGTCGACCCCTTCGCCGCCTTCGCCGCAGCCGCTGCTGCCGACGTTGCCCTCACCGCAGGCCTTCGTGGACGCGTACACCGGCTATGAGGATCAGGGAGCATGGGACCCCGATTCCTTGTCTCTAGAGTTGGGACTTGCAACGTTACGAGAGTTGGAATGTATCAGATATCAGGAAGCACAAGAAGACTGGAGAAAGAGTGATGATAACAAGTCTGATTCCTGCAAGCAAAAAGATAAGGAGCAGGAAGCATGGGATCCCGATTCCTTGTCTCTAGAGTTGGGACTTGCACCGTTACAAGAGTTGGAATGGATCAGATATCAGGAAGCACAAGAAGACTGGAGAAGGAGTGATGATAACAAGTCTGATTCCTGCAAGCTAAGAGATAAGACAACATCAGATGACCGGAGCAAGAGTGGCGATAACAAGTACGATTCCTGCAAGACAAGAGATAAGAAACCTATCGTGGATTTGGCTGATGAATTCGAAAACAATACCATCAAAAAAAAGATCACGCTTCTTAGCGAAAAATACGATTTCTTCAGACCAGTTGACAGAGATGGCAGTTGCTTTTATCGAGCTTTCATTTTCAGTTACATGGAGCGTATTGTAGCAATGCAGGATGACTTGGAGCGCATTATTGAAGTTTCCCGTATCGGAGAACGTATTGGAAAATACAAGCAAGCTTATGCAAGATTTGGTTCTTTTGGAATACCTCAAGAAGAATTCTTGAAAGCTCTTTCTGCATTTGAACAATTGATCAACTTAATTGAAAAGGGTGTTGCTGTTGAACAACTATATCAGATAGATGAGACTGACATCACAAAAAACAGTTTACGCTTCCTTAGGTTTCTGACTGAGATTGAGATCTGCACACATGAGGACCACTACAAGGGTTTTCTTCTAACAGCAGATTATTCATCTGTTTTTGAGTTTTGCCAGGTTGAAGTGCGACCTGAGAATGCTGAAGCGAGCAATGAACAGATGAAGGCACTTGTGGAAGCACTCGGCATCCCCGTACTTGTGGAGAATCTCGATACAACCTCGGAGACTGACACCCCCATACTAAATCAGCATTTCATCTACCCCAGACCAGAATCAGAAGAGGGCACGATGTTGGGACCTCTGAATTCGCATGAGATTGTCTCTCCTGAAAGCAGTGGTTACCATGCAGCTAGAGGTGAGCTTCAGAATCAGCCTAGTACCAGTGGCTCCAGTACAAACAGCTCAACAGAAGCATTGGGACTGCAATCAATTGGCACCAGTTCAACTCCTAATGAGCGAGATGGAAAGGGAGACAGGACCATCAACGACCTATCCCCAGCAGAAAGAAGGCGGTTAGCGATCTTGCTGTACAGGCCTGGGCACTATGACATTCTTTGTCCCAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MRRKPAASEGGWGSDADPDSGSSGNGGGGGSPPSSPSTPSPPSPQPLLPTLPSPQAFVDAYTGYEDQGAWDPDSLSLELGLATLRELECIRYQEAQEDWRKSDDNKSDSCKQKDKEQEAWDPDSLSLELGLAPLQELEWIRYQEAQEDWRRSDDNKSDSCKLRDKTTSDDRSKSGDNKYDSCKTRDKKPIVDLADEFENNTIKKKITLLSEKYDFFRPVDRDGSCFYRAFIFSYMERIVAMQDDLERIIEVSRIGERIGKYKQAYARFGSFGIPQEEFLKALSAFEQLINLIEKGVAVEQLYQIDETDITKNSLRFLRFLTEIEICTHEDHYKGFLLTADYSSVFEFCQVEVRPENAEASNEQMKALVEALGIPVLVENLDTTSETDTPILNQHFIYPRPESEEGTMLGPLNSHEIVSPESSGYHAARGELQNQPSTSGSSTNSSTEALGLQSIGTSSTPNERDGKGDRTINDLSPAERRRLAILLYRPGHYDILCPK</aaseq>

Gene Sequence

<dnaseqindica>1..195#1124..1207#1360..1425#1897..1980#2133..2198#2501..2566#2845..2904#2983..3066#3146..3289#3730..3764#3872..3924#4005..4105#4695..5153#ATGCGGCGTAAGCCCGCCGCGTCGGAGGGTGGTTGGGGAAGCGACGCCGACCCCGACTCCGGGAGCTCCGGCAATGGCGGTGGCGGAGGTTCGCCGCCGTCGTCGCCGTCGACCCCTTCGCCGCCTTCGCCGCAGCCGCTGCTGCCGACGTTGCCCTCACCGCAGGCCTTCGTGGACGCGTACACCGGCTATGAGGTTAGGGTTGTTGAATCGCGTCTCGTGCTCTTCCCCCCCCCCCCCCCTCCCATTTCCTGTGTTGTCTTCGGGAACACACCCCGCATCGAGGTTTTTTTTTCTGGTGATCTTTGCGTTAACGAGTTGGTGGGAACTGGTGGGGTTTTTCTCGTTGCGATGCGAGGCTTGTTGAGTTTTCCCAACGCGCGGCTCGGCTGCTCTTGCGGTGAAATTTTGGTTGGGAGTAGTCCTGCGGGGAGCAGCGGGGATGGGTTTTTTGGGGTTTATTGGGTAGTTTCTTTGAATTGATCGGTTGTTGTTTACCGTGTGTTTCTTGTCTTCTGGTTCTTGGATTCTAATCTGTTTGTCGGATTAGTTTCGTGGGGTTTTGTACCATTTGTTCTTGGATTTTTTTCCCCCTCTCTCAGCTCTGCCTCTGCTGCTTCGGCTTCACCATACCGCTCCTTGTGCATTGGATTGTTTCTTGAAGGTTTTAATCGAGTTTCAAGGTAGTTCTTGGTCTCTATCTAGTTTGATTGTCTTGACATAGGCAAGAATTAGGGCATTTCTTTCTTTAACCTTTGAGTTTGACGAATTGCATCTCCCCACTCTTGCTTGCATGATTCTGGACTTGATACTTCAGACAGGTGGAATTAATGTCAGAAAATAATACGATCTGCTTCTGCTGCTTGCGTGTTGGTTTCTGGTCGATTTCTCTATGTTTTCAGCGACCCAAATAGATAACTCAGTGTCCTAATTTAGACTTCTGATAGCTTTGCTGCCTGCGAGTTTTGATCTTGTTACCTGTATATACTATTGTGACCGTAATATTGGATTCTATTGTGATCGTAATGTTGCCTAGTACTGTGAAAATGTTTGAAAGTACTACCTCAGGATTTAGATCATGTGGTTTTATTACTGAGGATCACATGGTTTTATTGAATTACAGGATCAGGGAGCATGGGACCCCGATTCCTTGTCTCTAGAGTTGGGACTTGCAACGTTACGAGAGTTGGAATGTATCAGATATCAGGTGTGAACATCATCAACACAGCACAAGACTGTAAATTCACTAGCAGACTAACTAGATTTACCCAAACATCAATTTTGAAGCTAATTTTTGCATTTTGTCCGTTCGTCTGCGGAGCATAAGCTGACCATCCCATTGCCGTGAATTTTCTTTAGGAAGCACAAGAAGACTGGAGAAAGAGTGATGATAACAAGTCTGATTCCTGCAAGCAAAAAGATAAGGTGTGAAAGTTCTCTTTCTATTTCATCGAACTTGCTTTGCATGGCTACATGGACCTGAGCTTGACTAATTGCATCTTTTTTCCCCTCTTGCTTCTGGACTTGGTACTTCAGATAAGTAAGAAAAAGATAATGTAGAAAAGTGATCATCTGTTACCGCTACTCGCGTGTTGGTTTCTGGTCGATTTCTCTATGTTTTCAGCAACCCAAACAGACAACTTAGCGTCCTAATCTAGACTTCTAATAGCTTTGCTGCCTGCACCTTGTACTGGAGAGACTTCTGATAGTTTTGCTGCCTGTGAGTTTTGATCTTGTTACCGGTTTACTATTGTGATCTTAATATTGGATTTTTGTGATCGAAAGGGGAACTTTTTAGCACATGCCTAGTACTGTGAAAATGTTTGAAAGTACTACTTCAGGATTTAGATCACGTGGTTTTATTACTGAGGATCACATGGTTTTATTGAATTACAGGAGCAGGAAGCATGGGATCCCGATTCCTTGTCTCTAGAGTTGGGACTTGCACCGTTACAAGAGTTGGAATGGATCAGATATCAGGTGTGAACATCATGAACACGTCACAAGACTGTAAATTCACTAGCAGGCTAACTAGATTTACCTAAACATCAATTTTTTGAAGCTAATTTTGCGTTTGTTCGTTCATCTGCAAACCATAATCTGACCATCCCATTGCTGTGAACTTTCTTAAGGAAGCACAAGAAGACTGGAGAAGGAGTGATGATAACAAGTCTGATTCCTGCAAGCTAAGAGATAAGGTGTGAAAGTTCTCTTTCCATTGCTGCATGGACCTGAGTTTGAGTAATTGCATCTGTTTTTTCCTTCTTGCTTCTGGACTTGGTACTTCAGATAAGTAAGAGAAAACTAATGTAAAAATAAAATGTGATTCTCTGTTAACGCTACTCACGTGTTGGTTTCTGATCGATCTCTCCATGTTTTCCAGCAAGACATATTTATATATAACTTAGTGTCCTAATTTAGACTTGTGATAGCTTTGCTGCCTGCACCTTGTATTGGAGTTTTAATCTTGTTGCCATTCCACTGCTGTGAACTTCTTTAGACAACATCAGATGACCGGAGCAAGAGTGGCGATAACAAGTACGATTCCTGCAAGACAAGAGATAAGGTATGGAATTTCTCTTACCATTTCAACGAACTTGCTTTGCATGGCTACATGAACCTGAGTTTCCTCTGACTTCTCTCAATTAGATCAAACAGTACCATGACTCGTGTGCTTCTCACAACCATTGTTCCTAAAATATCCATCTTTTAATCCACCTTGAGCTTAGATGCTTCTCATAATCAGTGCCCCATGAAAACCATGTAACCTACCGAGACTGGCTAACTGATATGTTTAGTTTTGATTGAATACCCTTTTAATTGTGTGATATTTTGGTACTGCAGAAACCTATCGTGGATTTGGCTGATGAATTCGAAAACAATACCATCAAAAAAAAGATCACGGTATGTTCATATATTGTGCACATTATTTTTTGTCAGTATACATTTAACTATTCTGCTAACTTGAAATTCTATACACAGCTTCTTAGCGAAAAATACGATTTCTTCAGACCAGTTGACAGAGATGGCAGTTGCTTTTATCGAGCTTTCATTTTCAGTTACATGGTAAATATTTCGGCCCGCTTGTTCAAACTATGCTTTGTTCTTGTTTGTTAGACACTAAAGCTCATTGGTGTACAAACAGGAGCGTATTGTAGCAATGCAGGATGACTTGGAGCGCATTATTGAAGTTTCCCGTATCGGAGAACGTATTGGAAAATACAAGCAAGCTTATGCAAGATTTGGTTCTTTTGGAATACCTCAAGAAGAATTCTTGAAAGCTCTTTCTGTACGTACTTTTAGTTCTCAGTTTTCAACATTCACCAGTACAATTTGCCCAGTGTGGGACATTCTTTTCACATTTTATATTATTGATCACACCTTCACTCTTTTAATCTTGCAAGTGCACACTTCATTGAGTTTGAATAGTAACTGCCGATGTCCTTTGGCCCCATTTCTATTGAACTGATTATTTTGATTAGCTTTATAGTTCATTTTGGAAGTCATTTGGGGCAAAATGTTTTCTGTAGTCAATGGTACGGCACATCACAAATGAGCTAAGCTTGTAAATCGTTATGTGATTTCCATGTCTGCTCAGGTTAAATTAACCTGCGCTTTGCTAACAGCTCTGGTTTGCTATGCTTGCTGATAGTTATGATTTGTAGCATTTGGTTTTCTTTATAATTTATAGCCCAGAATCACTGAATTTGCTGAATTTCTTTGTTGCAGGCATTTGAACAATTGATCAACTTAATTGAAAAGGGGTATGGCTAATTAGCATCCTGTTGGTTTTCAAGTTATGTTTAGGAATGATATGAAGATATTGTTTCTTGTTATATCTTAGCTGACAAACACTGTTTGTATTTCATAGTGTTGCTGTTGAACAACTATATCAGATAGATGAGACTGACATCACAAAAAACAGTGAGGATACTTGATGATTGCTAGACTGTTTTTCCTTGTTACTCATCTGTTTCACTGCATGATTTTTTTTCCCTGTTTAGGTTTACGCTTCCTTAGGTTTCTGACTGAGATTGAGATCTGCACACATGAGGACCACTACAAGGGTTTTCTTCTAACAGCAGATTATTCATCTGTTTTTGAGGTAGAAGAATTGTGACTTCCTAGCCTACTACCACCCACCCATACTTCATTACCAATATTTTGCTGCATGTGTAGTGCTTTAGATGGTTGTTGCTAATTACGTAATATTTTGGAATCTAATAAGAAAAAAACTCCTTAATTTGTAATCTAATAAGAAAAAAAAAACTCCTTGAATTATGCTTCTAATGTACCAGATGTTAAAATTTCTAAACAATGCTAGGATTTTCTTTTTCTTTACAGGCTCATTGATCCCACAAAGTCCAAACAGTAGGCAGAATGGATTATATTTTTGTTTGATTTATTGGCCCCTATTACAGTTCAAAGTCCAAACAATTTGCTATATGCTCCTTTTGACTCTTTGTTTTAGTTGTTGAAGTTTTACCCCACTTTGAAAAGATGTTGAAGTTACATAAACCACAAAGTCAAACATAGGACATAAGCGGGAAGATATTATATTGGATGAATCTATTTATATTAATAGGTTTTTCTTCGCCTAGCTTCTATTCCTTCTGTATACAAGATTTACCAGCAAAAGGAAAAAAAAATATTTAGGCAATTAGCATTTACTTGTGCTTTGTTTCGTCAAACAGTTTTGCCAGGTTGAAGTGCGACCTGAGAATGCTGAAGCGAGCAATGAACAGATGAAGGCACTTGTGGAAGCACTCGGCATCCCCGTACTTGTGGAGAATCTCGATACAACCTCGGAGACTGACACCCCCATACTAAATCAGCATTTCATCTACCCCAGACCAGAATCAGAAGAGGGCACGATGTTGGGACCTCTGAATTCGCATGAGATTGTCTCTCCTGAAAGCAGTGGTTACCATGCAGCTAGAGGTGAGCTTCAGAATCAGCCTAGTACCAGTGGCTCCAGTACAAACAGCTCAACAGAAGCATTGGGACTGCAATCAATTGGCACCAGTTCAACTCCTAATGAGCGAGATGGAAAGGGAGACAGGACCATCAACGACCTATCCCCAGCAGAAAGAAGGCGGTTAGCGATCTTGCTGTACAGGCCTGGGCACTATGACATTCTTTGTCCCAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017258

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017258&oldid=66152"