BGIOSGA017263

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Revision as of 04:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017263| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017263, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA017263

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017263, complete gene.

LocusTag

OSIGBA0147J19.1

Ensembl Transcript ID

BGIOSGA017263-TA

Ensembl Protein ID

BGIOSGA017263-PA

Length

3874

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32401804..32405677

Sequence Coding Region

32401804..32401861,32401977..32402367,32402648..32402730,32403027..32403115,32403299..32403372
,32403586..32403636,32403752..32403828,32405037..32405677

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32401804..32405677 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32401804..32405677 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACATGGACACCTCGCACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTGAAATGGAGGAGGAGGAGAGGGGCGCGGCGGCCGAGCTGGCCGCGATAGCCGGGGCGGCTCCGCCGCCGAAACTGGAGGACTTCCTCGGCGGCGGCTGCAACGGGGGATCAAGCGGTGGCGCTTGCCCGCCGGTCCAGACGACGGCGCCGACGGCCGCCGAGCTGTACGAGTCGGAGCTCAAGTTTCTCGCCGCCGGCTTCCAGCTGAGCGGCGCGGCTGGGGCGGCGCCGCCGGTGCCCGCGCTGTTGCCGGCGGCTGCTCTAGAGCAGACCGACGAGACGAAGCAGCTGGCCTTGCCGCCGCGGGCCGCGGTGGCGCCGCCGCCGGAGCAGAAGAAGGCGGTGGACTCGTTCGGGCAGAGAACGTCTATCTACCGCGGCGTCACACGGCATCGGTGGACCGGAAGGTACGAGGCGCATCTGTGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTTCCGGTTGCCGAGTACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTCTCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGCTGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACATCGCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCCGCCGACGCCATCGCCGCCACCGAAGCGAACCACACCGGCGTCGCGCCACCGTCGACGCTTGCGTTCACAGCTCTTCCAATGAAGTATGATCAGGCAGATTACCTGTCATACCTCGCATTGCAGCATCACCAGCAAGGAAACCTTCATGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTAAACCTGGATTTCGCAAATGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATGAGCAGCAGCAGCAACATCAGCAGCAGCAGCAAGATCAACAGGATGATCAGTCACAAAGCTCCAACAACAGCTGCGGCTCCATTCCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATGAAAGCTCCATGACAGCAGCAGGCACCTTTGGATACTACCCAAATGTTGCAGCCTTTCAGACACCAATCTTTGGGATGGAATGA</cdnaseq>

Protein Sequence

<aaseq>MDMDTSHHYPWLNFSLAHHCEMEEEERGAAAELAAIAGAAPPPKLEDFLGGGCNGGSSGGACPPVQTTAPTAAELYESELKFLAAGFQLSGAAGAAPPVPALLPAAALEQTDETKQLALPPRAAVAPPPEQKKAVDSFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGPSTTTNFPVAEYEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTEEEAAEAYDIAAIKFRGLNAVTNFEIGRYNVESIISSNLPIGSMAGNRSTKAGLELAPSSSADAIAATEANHTGVAPPSTLAFTALPMKYDQADYLSYLALQHHQQGNLHGLGFGLYSSGVNLDFANANGNGAMSNCYTNVSLHEQQQQHQQQQQDQQDDQSQSSNNSCGSIPFATPIAFSGSYESSMTAAGTFGYYPNVAAFQTPIFGME</aaseq>

Gene Sequence

<dnaseqindica>1..58#174..564#845..927#1224..1312#1496..1569#1783..1833#1949..2025#3234..3874#ATGGACATGGACACCTCGCACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTTAGTACTCATTCTACTTCGTTGTCTGTTCATCGATCACATGTGTGTGTGTTCTTGGTCATTTTTTGGAGTAAGTGCCGTGCTTATGCGTTGGTATGTGTGTGTGTTTGTGCAGGTGAAATGGAGGAGGAGGAGAGGGGCGCGGCGGCCGAGCTGGCCGCGATAGCCGGGGCGGCTCCGCCGCCGAAACTGGAGGACTTCCTCGGCGGCGGCTGCAACGGGGGATCAAGCGGTGGCGCTTGCCCGCCGGTCCAGACGACGGCGCCGACGGCCGCCGAGCTGTACGAGTCGGAGCTCAAGTTTCTCGCCGCCGGCTTCCAGCTGAGCGGCGCGGCTGGGGCGGCGCCGCCGGTGCCCGCGCTGTTGCCGGCGGCTGCTCTAGAGCAGACCGACGAGACGAAGCAGCTGGCCTTGCCGCCGCGGGCCGCGGTGGCGCCGCCGCCGGAGCAGAAGAAGGCGGTGGACTCGTTCGGGCAGAGAACGTCTATCTACCGCGGCGTCACACGGTAAGCTATAGCTAAGCTAAGCTGAGATCGATCAGTCTATGCATGTGTCAGCCATAAAATCTAAAAATAAATTCTTAGCTAGCTCGTCTAATTTCTTGCACGCAAACTAATCATCTCGTGTTCGTGTGCATCCTTCATATATAGATTCACATGCATCATCGATCGTATTAATAGGATTTAGTAGTAGTTTTTTTTTTGTTAATGGGAGTAGATGAATCAAATGACCAATATTTGTTCAGAGATTTTAATTAGGGCATAAAAAATCCATGGTTATGTATAGGCATCGGTGGACCGGAAGGTACGAGGCGCATCTGTGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGGTCACTACTCAATAATTTTACTACTGCATTTTGCTAGCTATTTGCATCTAATCTCATAAGTGCATCCAGCTAACTTCGATTTTCTTTTTTGTTCTGTCGACTTGTTGGCAATGCTTCTTCTCATTTATGGCTGATGTTTCTGGTGTCTTCGATCTACAGTGTACTTGGGTAAGAAAAGACACATGCATCTAGTCTCTTGGCCAGCTACTAGCTAGTAGTAGCAGCTATTGTAACTTTGCATCGTTTGGAACATTTTAAGGTGAATGATGCAGAGAGTTTGTTCGATGATTTTACAGGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTTCCGGTAATTAACTCTCATGCATATATATAAAGATGGATTTATTACATATTTACAATGCATGCATGATCAAAATATATAGCTCCTGATTGATGCAAGTGTGTAGTAAAAGCATGTGCATCATGCGTATATGTGTGTGTGTTTTTGGTTGATGTATCTTTATGGGGCAAGCTGTTTATAATCTTTCAGGTTGCCGAGTACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGTACAAGCTAATGATCACTCTTTAGCAATGTTTAATTATATGTTGTGATATTCCATGCATGGCCATTCATCAAAGTATATATGCTCCCATGCAAAGCCATTCTATGCATGCATGTTTCATCATGATCACCTGTTTTTTTATATGTATGTATGTAGCTTTGTTAATTTATTTGTTCATGTCAGCTTGATGAAAAACTTGTACTGGTGCATGCAGGAAGAGCAGTGGATTCTCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGGTTCATATATATATTGGTCTTGTACTAATCTTTCACTTGTAGCCTAGCTAGCCATGTTTGGCCTCTTGCACGTAAGTCTCAGGTAACTGATGTTTTGTGTGATGCAACCATGTAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGCTGGCAACAAGGATCTCTACCTCGGAACATTCGGTAATTAAGTTTGTACATTAATTTCCATGTTGAATCTGTCGTCCATGTTCATTTTTTTTGTTTAGCAGAAATTTGTTAAGCCTTTTTTTGTTGCCCTCTTCTTCAACAAATGCATGACCTGATAAGAAAAAGTGATATCAATAACCCAACAAAACCTCTCAACATTTGACTAATTATATCTGGGTGATGTTTGCAGAAAACACGCATGTAGGCAATACTTTCATGCATGTAGGCAATACTACTTTCATGCTAATGTTTTCTAATACTAGTGGATCTACTGACAATGCAATGTCAGTGTGCTCATCATGTAGAAGAATGCTCAAGAGTTTTCTCGCCGCTAAGCTATACATAATCTTTGTCATTAGAACTTTCTTTTATCAAAGATGAAATTGCAAGTAGGAGGGTGCATGCACGTGTTGGGCCCCTCATTAGCTAGCATTAGTCATTTTCTTACACTCAACATTACAATATTAAGCCCTTGCACGTAGGCTCCATCTTAATTTATGCTTTGCACACACAGGGCTTGTAGCTAGATTCGTCGACATATTTTATGCAGGTCAAAAACATCTACTTTGACCAAGATGTAAGCATGCCCACATTTGATTCGAAATTTGTCATCTTTTGCGCGCCATGCATGATGGTTTTGGGGCTTTATGCAGCAGGCAAGGAAAAAAGAAGACACACCATGCTTAGACCATGGACGCATGTATATATCTATGGCTGATTGATTTGCAAACCTGAACACTACTGCCTTTCTTCGTTCACTGCATGTAGCAGCCCGTGTTTGGAATATCATTATTACTGCTATTACCGCGCTCGGCTTTCCACAAAGCATGTGATTGGTGATTAATTTACTACTGCCTTGCTGAACCGGCCATTATTATTGTACTATGTTGGATTTAACTAAGCTTGATCACCACACTGGGCTACAGTTTCGTCAGTTGTTGCTTGGTCCAAAGTCTTACTGGTGCAACTTGCTGGTTATCTATAAACTTACTGGAAGGCTCACTGCACTATGATGCCATACTTTGTTAAGTACAATTAGCTAATTCAAATATGTTTCATGTGACATTACTATTCAGCCATTAGTAATTTACAGGTGGTGTTGATTTTACTTCAAGTACCTAAATAAAATTGACAATAACGCATCGTTCTTCTGCATATGTGTGGTGTTCAACAGCTGATTGTTGCTTGCTTCCTTCTTTCAGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACATCGCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCCGCCGACGCCATCGCCGCCACCGAAGCGAACCACACCGGCGTCGCGCCACCGTCGACGCTTGCGTTCACAGCTCTTCCAATGAAGTATGATCAGGCAGATTACCTGTCATACCTCGCATTGCAGCATCACCAGCAAGGAAACCTTCATGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTAAACCTGGATTTCGCAAATGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATGAGCAGCAGCAGCAACATCAGCAGCAGCAGCAAGATCAACAGGATGATCAGTCACAAAGCTCCAACAACAGCTGCGGCTCCATTCCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATGAAAGCTCCATGACAGCAGCAGGCACCTTTGGATACTACCCAAATGTTGCAGCCTTTCAGACACCAATCTTTGGGATGGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017263