BGIOSGA017272

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Revision as of 04:42, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017272| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017272, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA017272

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017272, complete gene.

LocusTag

OSIGBA0158D24.1

Ensembl Transcript ID

BGIOSGA017272-TA

Ensembl Protein ID

BGIOSGA017272-PA

Length

6412

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32530918..32537329

Sequence Coding Region

32530918..32530959,32532581..32532700,32532817..32533053,32533831..32534715,32534811..32534915
,32534998..32535142,32535224..32535388,32535469..32535707,32535802..32535834
,32535918..32535999,32536095..32536255,32536360..32536533,32536627..32536809
,32536910..32537097,32537233..32537329

Genome Context

<gbrowseImage1> name=IndicaChromosome04:32530918..32537329 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:32530918..32537329 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTGGGCTCGAGGAGATCAAGAATGAGGCCGTTGATCTGGAGAACATACCGATCGAGGAGGTGTTCGAGCAGCTGAAATGTACGCGCGAGGGGCTCTCCTCCGAGGAGGGGAACCGGCGTATCGAGATGTTCGGCCCCAACAAGCTCGAGGAGAAGAAGGAGAGCAAGATACTCAAGTTCTTGGGGTTCATGTGGAACCCGCTGTCGTGGGTCATGGAGATGGCCGCCATCATGGCCATCGCGCTGGCCAACGGCGGCGGCAAGCCACCGGACTGGGAGGACTTCGTCGGTATCATTGTCCTGCTGGTTATCAACTCCACCATCTCCTTCATCGAAGAGAACAACGCCGGCAACGCCGCTGCTGCTCTCATGGCCAACCTTGCACCCAAGACCAAGGTGCTGAGGGATGGCCGATGGGGCGAGCAGGAGGCAGCAATCTTGGTTCCCGGTGACATTATCAGCATCAAGCTCGGTGACATCGTCCCTGCTGATGCTCGTCTCCTTGAGGGTGATCCCCTTAAGATTGACCAGTCTGCACTTACTGGGGAGTCCCTTCCAGTGACCAAGAACCCTGGTGATGAGGTCTTCTCTGGCTCGACCTGCAAGCAGGGTGAGATTGAGGCCGTGGTCATTGCCACTGGAGTGCACACCTTCTTCGGCAAGGCGGCGCATCTTGTTGACAGCACCAACCAAGTTGGTCACTTCCAGACGGTGCTCACTGCGATCGGGAACTTCTGTATCTGCTCGATTGCGGTTGGTATCGTGATCGAGATCATCGTTATGTTCCCGATCCAGCACCGTGCCTACCGCAGTGGCATTGAGAACCTGTTGGTCCTCTTGATCGGTGGTATCCCAATTGCCATGCCTACCGTGCTCTCGGTCACCATGGCCATTGGTTCCCACAAGTTGTCCCAGCAGGGTGCTATCACCAAGAGGATGACTGCCATCGAGGAGATGGCTGGCATGGATGTTCTGTGCAGTGACAAGACCGGAACCCTCACCCTTAACAAGTTGAGCGTCGACAAGAACCTCGTTGAAGTGTTCACTAAAGGTGTTGACAAGGACCATGTTTTGTTGCTGGCTGCAAGGGCATCTAGGACAGAAAACCAAGATGCCATCGATGCTGCCATGGTTGGTATGCTTGCTGATCCCAAGGAGGCAAGAGCCGGTATCAGGGAAGTGCACTTCTTGCCCTTCAACCCAGTTGACAAGAGGACTGCTCTAACATACATCGATGCCGATGGTAACTGGCACCGTGCCAGCAAGGGTGCTCCTGAGCAGATCCTGACCCTGTGCAACTGCAAGGAGGATGTAAAGAGGAAGGTGCATGCTGTGATTGACAAGTATGCTGAGCGTGGGCTTCGTTCTCTTGCTGTTGCAAGACAGGAAGTACCTGAGAAGTCGAAGGAGTCTGCTGGTGGACCATGGCAATTCGTTGGTCTGCTGCCCCTGTTTGATCCCCCGAGGCACGACAGTGCTGAAACTATCCGGAAGGCTCTCCATCTTGGTGTTAATGTTAAGATGATCACTGGTGACCAGCTTGCTATTGGTAAGGAGACTGGTAGGAGGCTTGGAATGGGTACAAACATGTATCCTTCATCCGCATTGCTCGGACAAAACAAGGACGCTTCACTTGAGGCACTTCCCGTGGATGAGCTCATTGAGAAGGCTGATGGTTTTGCCGGAGTCTTCCCTGAGCACAAATATGAGATCGTGAAGAGGTTGCAAGAGAAGAAGCACATCGTCGGTATGACCGGAGATGGTGTCAATGATGCCCCTGCTCTTAAGAAGGCCGACATTGGTATTGCTGTTGCTGATGCTACAGATGCTGCAAGAAGTGCTTCCGACATTGTGCTCACTGAGCCAGGTCTTAGTGTCATTATCAGCGCTGTCCTCACTAGCAGATGCATCTTCCAGAGGATGAAGAACTATACCATTTATGCAGTTTCCATCACCATCCGTATAGTGCTTGGATTTTTGCTTATTGCTCTGATCTGGAAATACGACTTCTCACCCTTCATGGTCCTTATCATTGCCATCCTGAATGACGGTACTATCATGACGATCTCGAAGGACAGAGTTAAGCCTTCTCCCTTGCCAGACAGCTGGAAGCTGAAGGAAATCTTCGCTACCGGTATTGTGCTTGGAAGCTACCTTGCTCTGATGACCGTTATTTTCTTCTGGGCCATGCACAAGACAGACTTTTTCACGGACAAATTCGGTGTCAGATCAATCAGGAACAGTGAACATGAGATGATGTCTGCACTGTACCTCCAAGTCAGTATTGTGAGTCAGGCCCTCATCTTCGTCACCCGTTCTCGCAGCTGGTCCTTCATCGAACGCCCTGGTCTTCTCTTGGTCACTGCATTCATGCTTGCACAACTGGTTGCGACATTCCTCGCTGTCTATGCCAACTGGGGCTTTGCCAGGATCAAGGGCATTGGCTGGGGCTGGGCTGGCGTTATCTGGCTTTACAGCATTGTGTTCTACTTCCCTCTTGACATCTTCAAGTTCTTCATCCGCTTTGTGCTGAGTGGAAGGGCCTGGGACAACCTCCTTGAGAACAAGATTGCATTCACCACCAAGAAGGATTACGGTAGGGAGGAGAGGGAGGCACAATGGGCCACCGCACAAAGAACACTTCACGGCCTTCAGCCACCGGAGGTCGCCTCCAACACGCTCTTCAACGACAAGAGCAGCTACCGCGAGCTCTCTGAGATCGCTGAGCAAGCCAAGAGACGAGCTGAGATCGCGAGGCTGAGAGAGCTGAACACTCTCAAGGGCCACGTCGAATCGGTGGTGAAGCTGAAGGGGCTGGACATCGACACGATCCAGCAGAACTACACAGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MGGLEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQTVLTAIGNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAARASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASKGAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLLPLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFLLIALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYLALMTVIFFWAMHKTDFFTDKFGVRSIRNSEHEMMSALYLQVSIVSQALIFVTRSRSWSFIERPGLLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLDIFKFFIRFVLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV</aaseq>

Gene Sequence

<dnaseqindica>1..42#1664..1783#1900..2136#2914..3798#3894..3998#4081..4225#4307..4471#4552..4790#4885..4917#5001..5082#5178..5338#5443..5616#5710..5892#5993..6180#6316..6412#ATGGGTGGGCTCGAGGAGATCAAGAATGAGGCCGTTGATCTGGTGAGAAAATCACTCGCCGCCACCAGCTACCTACTACTTCTTCTTCCTCGCTTCCTCCCTCTCGCGTGTTGGGTTGCTTAGGCTTTAGCTCTAGCTTTAGTTCTTACCATTTTTGACTGGCGATAGAAATAGTCTGAGAATTGAAAATTAATGATACCGGCTAGCTGGAGCTGAGTAGATTTCTGATACGCTTAATAAATGAAAAGGAAAATTTTCCATGTAAAGATGAGCACGGATCGTTCGTCGTCGGCGGCGGCCTTCACGTCACGCTCTCTTTCTCAACGCGGCTTTTCATAACAGAAGGGGCCAGTTGTCCATGGCCGCCTGCCATGTTCTTCTCTTATTCTTCTTCTCTCTCACCCTGTTCGCTCCTCTGTACTGTTTTGCTGCTGTTCCTCTCACCATCATCAATTTGTTCATCTGTCTCCGGCTCCTCCTTTTTTTTGGTTGAAATGAAACTTTTTGAAAGATCCTGCTCACATGCGTGTTTAATCTGTCATGTAGGAGTACACTATACCACTATGGTCACTTCTCCACCAAACTATAGTATAAAAAAAATTGAATCTCAGATCTACGCGTAATTAAATGCCCACCTCCAGTTATTAGTATTACTCTTGCCTCTACTTTCCTTTTTTTTTAGTTCTTCATTTATACAAAGAAGCAGTGAACAAATATACTCAAATAGTTCTTCAGCTTCGCAAGTACTCCTACTCCATAAAACTATTTTTCAGCTTCACACGTAAAATTAAAATTATTCATGAGCTTCATACGAATTTGCATGTACGTAAAGTCAAAAGTCACTTGAGCACGGGCGCGAGCTAATCACGCAGCGGAGATTAGTGGCTAACCACCATAAAGGCAAGCTAAACACACAGTGGAATCCGTGCGTGCCTAGCTGAGCTGCGGCCTTTTTTTTTTTTTGGTTTGCTTTGTTTTTTTTTTTGTTCTTTTTTGTTGACCAAGCGGACAGCCCAATCCAAGAGCACAACGTATACCAGCCGCTGCTCGCTTTATCTTTTTTTTAAAAAAAATAAAAATAGATTAAAAATCAGTTTAATTTTGGGCTGGTTTTGTTCCCTTCGGCTCACGCGACGAGAAAACGAAACCGCATCTTCCCGGCACGCATCTCAAGGACGACACGAGGGGGGCCACGGGAAGTACGCGCGCCTCCTCTGACTGCCGCTGAGCCGTCTGATCTCCATCTGACGGCCGTACTTTCTCCAATCATTGGCCGGGCACTGCAACCCCCCTGTTGCCCCTTGGACTCTTCCTCCTCCGTGTGTTCCTAGTAGATCCTGACCGCTTGGCTGGTAGGCGCTGACGGCGTGGGCCCACACGCACCACCTGGGAGATATTTTATCTGTCAATGACAGGTCGGGCCCATCCACCAATAGTAATAGTTTTTTGATAAGGCTGTAAATTGTTCAACACGCGAATCTAATTATAGGTCGAATAACGAGATAGTGATAATTAAGGATTTATCGCTGTACTCGCATATCATAGACCCGACTGATAAATTCTTAATTGTCACGTCTTACTCGAATAACTGGGTAACCCGAGTTCTTATTTCTCACTCTGTTGTTGCTGACTAGTGTGGTTGTGGCTTTTGTTGTTGTTGCAGGAGAACATACCGATCGAGGAGGTGTTCGAGCAGCTGAAATGTACGCGCGAGGGGCTCTCCTCCGAGGAGGGGAACCGGCGTATCGAGATGTTCGGCCCCAACAAGCTCGAGGAGAAGAAGGTGCGTGCTATGCTTTGTCAAAGCCTTTTGCATTCTCTTGTTGCGTGTGGTTTTCTTTCATTTCTGACGCGAATCGCTCATCTTTGTTGCGTCTTTTTGTTTGTGTGCTTGTGCAGGAGAGCAAGATACTCAAGTTCTTGGGGTTCATGTGGAACCCGCTGTCGTGGGTCATGGAGATGGCCGCCATCATGGCCATCGCGCTGGCCAACGGCGGCGGCAAGCCACCGGACTGGGAGGACTTCGTCGGTATCATTGTCCTGCTGGTTATCAACTCCACCATCTCCTTCATCGAAGAGAACAACGCCGGCAACGCCGCTGCTGCTCTCATGGCCAACCTTGCACCCAAGACCAAGGTGAGCTCAAGAAACACTGGATAGGAGTACTAACTAATGCACTTTGAACTGGAAACCGACCTTAATTATTCCGTTGTACCACACAAGGCTTTGATTTTTGTATTGACTAGTTGTCATAATAGTATTATACAGTAGTGGAAGGAAGAATCTCTATGTGCGTACTTTTCGGACGGGCACTTTCAATTAGAGTGCCTAGAAACTGAGCTCTGAATTGTCCAGTGGATGGGTGGGCATATATTCCATTATTGCAAGAAAATAAAGATAGGGACCCACCTCTTGGACAGTACTGTTCATTTGGCGTAAATAATAGCCTAGGTGTTCTGCAATTGCGGCTAATTTGGATATTGTTAGCAAAACAACGTGGTCTAATTTTTCTGCTCTGGAGCTGGAAGTCAAGTTTCTGTCTTTCATACGTATGATAGATTGATAGGTCTATGATATCAGGAAGTATCCTCTTGGACATGAATTATTTCACCATCACAATTCTTTAACTGCTACGGAGCTCATCCTCAGTTAGCTAGTCGTCCCTTTCATTGTATTTTTATTTAATAGGATAAGGGGAGAAAAATGTGGCAGCGCACGCACGCACATCGTTGTCACGTGGAATTTTTCTTTTTTCGTGCAACTTGTCAACTCAAATCAGCCGAAATGAAATGTGTTAGGTACTAGGATGTGGTCATGTAGCAGTTGGCACTTTGGAATAAGTTGCAATAATAGTGAACACTGATTACGTAATCTTGAATTTTTCTTTTAACCAAACTTGTTTGCTTATTCCAGGTGCTGAGGGATGGCCGATGGGGCGAGCAGGAGGCAGCAATCTTGGTTCCCGGTGACATTATCAGCATCAAGCTCGGTGACATCGTCCCTGCTGATGCTCGTCTCCTTGAGGGTGATCCCCTTAAGATTGACCAGTCTGCACTTACTGGGGAGTCCCTTCCAGTGACCAAGAACCCTGGTGATGAGGTCTTCTCTGGCTCGACCTGCAAGCAGGGTGAGATTGAGGCCGTGGTCATTGCCACTGGAGTGCACACCTTCTTCGGCAAGGCGGCGCATCTTGTTGACAGCACCAACCAAGTTGGTCACTTCCAGACGGTGCTCACTGCGATCGGGAACTTCTGTATCTGCTCGATTGCGGTTGGTATCGTGATCGAGATCATCGTTATGTTCCCGATCCAGCACCGTGCCTACCGCAGTGGCATTGAGAACCTGTTGGTCCTCTTGATCGGTGGTATCCCAATTGCCATGCCTACCGTGCTCTCGGTCACCATGGCCATTGGTTCCCACAAGTTGTCCCAGCAGGGTGCTATCACCAAGAGGATGACTGCCATCGAGGAGATGGCTGGCATGGATGTTCTGTGCAGTGACAAGACCGGAACCCTCACCCTTAACAAGTTGAGCGTCGACAAGAACCTCGTTGAAGTGTTCACTAAAGGTGTTGACAAGGACCATGTTTTGTTGCTGGCTGCAAGGGCATCTAGGACAGAAAACCAAGATGCCATCGATGCTGCCATGGTTGGTATGCTTGCTGATCCCAAGGAGGCAAGAGCCGGTATCAGGGAAGTGCACTTCTTGCCCTTCAACCCAGTTGACAAGAGGACTGCTCTAACATACATCGATGCCGATGGTAACTGGCACCGTGCCAGCAAGGGTGCTCCTGAGCAGGTGAGAAAGATTGACCCTTGTTTCACTTTTTTTTTTTTGCTAATTTCTTTACTTATAATACGTGACTGACATTTTTTTGGTTGAAATTTGGACAGATCCTGACCCTGTGCAACTGCAAGGAGGATGTAAAGAGGAAGGTGCATGCTGTGATTGACAAGTATGCTGAGCGTGGGCTTCGTTCTCTTGCTGTTGCAAGACAGGTATGATGGCTGCCTTACTGAATGATCTATCACCTTTTTAGTGATTAGGGAACCATATTCTCATACCAATATGATGTCGCAGGAAGTACCTGAGAAGTCGAAGGAGTCTGCTGGTGGACCATGGCAATTCGTTGGTCTGCTGCCCCTGTTTGATCCCCCGAGGCACGACAGTGCTGAAACTATCCGGAAGGCTCTCCATCTTGGTGTTAATGTTAAGATGATCACTGGTATGTACAAATATTATAAAAACAGAAAGCAGTATAATAGAATTTTGCAAGAGCTAATGGTTGGATTTTAATGTACATCAGGTGACCAGCTTGCTATTGGTAAGGAGACTGGTAGGAGGCTTGGAATGGGTACAAACATGTATCCTTCATCCGCATTGCTCGGACAAAACAAGGACGCTTCACTTGAGGCACTTCCCGTGGATGAGCTCATTGAGAAGGCTGATGGTTTTGCCGGAGTCTTCCCTGGTATGGCTTGGATCGATGCAGACTTACCTGCTTGTTTGCTTTCAATGTTTGCATTCCTCAATGTGTTTCTTGTTATGCAGAGCACAAATATGAGATCGTGAAGAGGTTGCAAGAGAAGAAGCACATCGTCGGTATGACCGGAGATGGTGTCAATGATGCCCCTGCTCTTAAGAAGGCCGACATTGGTATTGCTGTTGCTGATGCTACAGATGCTGCAAGAAGTGCTTCCGACATTGTGCTCACTGAGCCAGGTCTTAGTGTCATTATCAGCGCTGTCCTCACTAGCAGATGCATCTTCCAGAGGATGAAGAACTATACCGTAAGTTCTTCCTTTGCAAATAACTTGTGTTCTCTGTAAAACATATGATCACATCGCATTCTAACTTTGTATTATTTTGTCTCGTGTACATCAGATTTATGCAGTTTCCATCACCATCCGTATAGTGGTAAGTACCATTTCGTACATAAAAGATGGAATATAAGCTCTTTTCTCGATTTTCCAAACTCTAATATCAATTTTATTTTCCAGCTTGGATTTTTGCTTATTGCTCTGATCTGGAAATACGACTTCTCACCCTTCATGGTCCTTATCATTGCCATCCTGAATGACGGTATGCATTCCTATTGCCCAGATAAATTACTGATAACTATTCCCTCCATGTACATTCCTAGTGTAAGGATCAGTTCTCACGCAATATTTTTGCAGGTACTATCATGACGATCTCGAAGGACAGAGTTAAGCCTTCTCCCTTGCCAGACAGCTGGAAGCTGAAGGAAATCTTCGCTACCGGTATTGTGCTTGGAAGCTACCTTGCTCTGATGACCGTTATTTTCTTCTGGGCCATGCACAAGACAGACTTTTTCACGGTATGCTCTCACCTTACCCTATCTGTAGTCTGTCCACTACACTTCTCTCTCATTATGTATGCTTTTGCGTGAAGTTTTGTTCTCACTAAAGTGCTTTTGTTCAGGACAAATTCGGTGTCAGATCAATCAGGAACAGTGAACATGAGATGATGTCTGCACTGTACCTCCAAGTCAGTATTGTGAGTCAGGCCCTCATCTTCGTCACCCGTTCTCGCAGCTGGTCCTTCATCGAACGCCCTGGTCTTCTCTTGGTCACTGCATTCATGCTTGCACAACTGGTATGTACAAGACAGTAACTACTCAACAATCGAGCTACGTCATAACAACGTCACGGCAAATCATGCCTAATCCTAACCTTACTGTTTCTGTAGGTTGCGACATTCCTCGCTGTCTATGCCAACTGGGGCTTTGCCAGGATCAAGGGCATTGGCTGGGGCTGGGCTGGCGTTATCTGGCTTTACAGCATTGTGTTCTACTTCCCTCTTGACATCTTCAAGTTCTTCATCCGCTTTGTGCTGAGTGGAAGGGCCTGGGACAACCTCCTTGAGAACAAGGTACATATCCAGATCTTTCAGTTGTCAGAAATGTACATATATGGTTGTCTGCTCCATTTTTTGTTTCAGCTGGCTGATGATCCGAACCTTGTATTTGCAGATTGCATTCACCACCAAGAAGGATTACGGTAGGGAGGAGAGGGAGGCACAATGGGCCACCGCACAAAGAACACTTCACGGCCTTCAGCCACCGGAGGTCGCCTCCAACACGCTCTTCAACGACAAGAGCAGCTACCGCGAGCTCTCTGAGATCGCTGAGCAAGCCAAGAGACGAGCTGAGATCGCGAGGTACATTGCTCACTTCCAACACTGATAAAATCCATCAAGTGCCTAACCACTTATGTTAATTAATTAATTACTACTACATCAATGAGAAAATGTTGCTGAAAACTAAAACACTTGTTCTGGATCATAATCTTTCAGGCTGAGAGAGCTGAACACTCTCAAGGGCCACGTCGAATCGGTGGTGAAGCTGAAGGGGCTGGACATCGACACGATCCAGCAGAACTACACAGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017272