BGIOSGA017320

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Revision as of 04:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017320| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017320, complete gene.| tag = H1005F0...")
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Gene Name

BGIOSGA017320

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017320, complete gene.

LocusTag

H1005F08.24

Ensembl Transcript ID

BGIOSGA017320-TA

Ensembl Protein ID

BGIOSGA017320-PA

Length

2317

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33159939..33162255

Sequence Coding Region

33159939..33160109,33161340..33161602,33161685..33162255

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33159939..33162255 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33159939..33162255 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGACACGTCGAAGGGTATCCCTCAAGAGCAGCTGCCATCACAGGAGCTCCACCCGCCGCCAATGCCAGTGATCAACCTTGGCCACCTCAGTCTTGATGATCCCACGGTGCGGTCCCGGGTGGTCAACGATATCGCCAAAGCATGCCGTGATCTGGGATACTTCCAGGTTATAAGTCATGGGATCAGTCAATCAGTCATGGATGGTGCTATTGAAGCTGCTTCAGAATTCTTCAAACTGCCAAATGAGATAAAGAAAGAGTATGCATCAGATGATATCCGGCAACCTGTTAGATACGATACCAGCTCAAAGGATGGCATTAGTATGTCTCGGGCATTCCTGAAGCATTATGCCCATCCCCTCTGCGATTGGCTGCAATACTGGCCACAGCAACCACCAATATATAGGCAAGCAGTTTCTTCTCTTAGAAAGGAATACATGGCAAAATATGCCGTAGAAGTAAGGGTGGTGGCTCTGAAACTGATGGAAGCAATTCTAGAAGGCCTAGGCATTGGCAAGGAATACATGCAAGAGAAATTTGAGGAAGGCTTACAGCTATTGTCAGTGAATTGCTACCCTAAAGTGTCTCAAAGTGATACGTCAATAGGTCTGGCAGCACATTCTGATTATGGGCTCCTAACCATCTTGCTCACAAGTTGTCAGGGCCTTGAGGTTGTTGACCGCAGCAGCAACAGCTGGAAAGTGGTCCAGCAACTCCCACATGCATTGCATGTCCATGTAGGAGACCACATGGAAGTTCTAAGCAATGGCCGAATCAAGACTGTTGTGCACCGCGCTGTTCTGAATCCTCAAGAAGCAAGGATTTCTCTCGCTAGCATTCATGGTTTTGCACTGCATGAGAAGGTCTCCAGTGCCAAAGAGCTGGTCGACGAGGAAAATCCACAAAAGTACAAAGAAAGCAGCTTTAATGACTTCCTAGAGCATCTCACTGCCAATATGGACAACAGGCAAAGGAACTTTCTTGAGAGCCTTAGAATGTAA</cdnaseq>

Protein Sequence

<aaseq>MSDTSKGIPQEQLPSQELHPPPMPVINLGHLSLDDPTVRSRVVNDIAKACRDLGYFQVISHGISQSVMDGAIEAASEFFKLPNEIKKEYASDDIRQPVRYDTSSKDGISMSRAFLKHYAHPLCDWLQYWPQQPPIYRQAVSSLRKEYMAKYAVEVRVVALKLMEAILEGLGIGKEYMQEKFEEGLQLLSVNCYPKVSQSDTSIGLAAHSDYGLLTILLTSCQGLEVVDRSSNSWKVVQQLPHALHVHVGDHMEVLSNGRIKTVVHRAVLNPQEARISLASIHGFALHEKVSSAKELVDEENPQKYKESSFNDFLEHLTANMDNRQRNFLESLRM</aaseq>

Gene Sequence

<dnaseqindica>1..171#1402..1664#1747..2317#ATGTCTGACACGTCGAAGGGTATCCCTCAAGAGCAGCTGCCATCACAGGAGCTCCACCCGCCGCCAATGCCAGTGATCAACCTTGGCCACCTCAGTCTTGATGATCCCACGGTGCGGTCCCGGGTGGTCAACGATATCGCCAAAGCATGCCGTGATCTGGGATACTTCCAGGTAAATTTCCTTTAACGCAACGTAGTGACACAGCCTTTTTGTCATGTTCTTACTCTCTAGACTTGGTCTTTTCCTATGTCCAAACACTGAAGACAGTTTACGTTGACGCCATTTTGACATGTGCTAGAATGGTATGGGGTAGTCAACCAAGGAAGCTTATCCTTGTGTCCCAGCCACATTTCTATCTGGCAGAAAACTCCAAATCAAAGAGCAAGTAATTGAACCCTAGGAGCTATCAGATCGGGACCCTTCTTTGAAATCCTGCAGGTAGCAATGGCAGCATAATATTGTTCGCTAACGGTGAAGAATATGGTATGCGCCTCCTTTTTCTGGAAGTGGTGATATGGGCAGTCTGTATCTACTGAACTACATGTTTGATGAGCTGCATCCTATTTTTGCTCCCACCAAAATGGAGAGTTTGATCTGTGCAAGTCTAGGAAAACTGTACATATAGTACAATTCACTGCACCAACTCTTTGTATGGGCTAAACAGCTCTTTCATGAAAATGGGAAAAACTAGATAAGGAAAAAAAACAACTAAACTTTATCAGTTTGTTATGTGGAAACCCACAAATGATGAAGCGGAAGCAAACCTTGTGCTGTGAGCATGCTAGACTTGATTAGCTTGCCAAACCGAAGGTACACAAATACATGACATATGCAAAGTACCGTATCATTGCAATGCAATGAATGACTTGATACTTTGAATTGAGACCTTAGTTCTTTGTAACAATAAATATTTCAATGATGAACTGTAAATTAGTATTCACAAAATTTGAAAAGATATGCCAAAGTATCTCTTTCTAGGTTAAAAAAGACATATGTAAAACCTCTATATGATCATCTACTTTTTACAAGATTGGTTAACATTTCAAGTTCACAAGTCTGAAACTGACTCTACACCTAATCGATATTTTAGCTTTGGGTTCTAAACCACTGCAATTTTTTTTTCTTTTTCCGTCCATGTGGACATATCAAGGCTGCCAGCACTATCACTGGGGTGTTTTATAAACCTTTCAGTAATGACAAGAACGGACCATGTATATAAAAGTGCAATTTGTGCATATAGAGAAGGACCATTCAAATGCTATTTTTCCTGATTAAGTTGCTACTTCATAAGATAAGTACCAAAGCATTCTTTTCCTACATCATCACTAACTAGCAGGCAGTAAGGGAACAAAGAAAGCTTACTTGTGCACCCAAGTCTCTACTAATTCTGCCATTTTGCAGGTTATAAGTCATGGGATCAGTCAATCAGTCATGGATGGTGCTATTGAAGCTGCTTCAGAATTCTTCAAACTGCCAAATGAGATAAAGAAAGAGTATGCATCAGATGATATCCGGCAACCTGTTAGATACGATACCAGCTCAAAGGATGGCATTAGTATGTCTCGGGCATTCCTGAAGCATTATGCCCATCCCCTCTGCGATTGGCTGCAATACTGGCCACAGCAACCACCAATATATAGGCAAGCAGTTTCTTCTCTTAGAAAGTCATTTTACATTGTTGAACAAACAAAATAACAGTGCATGACAGTAAGAATGAAAATGACTCCTTTTGTTTATTGAAAACAGGGAATACATGGCAAAATATGCCGTAGAAGTAAGGGTGGTGGCTCTGAAACTGATGGAAGCAATTCTAGAAGGCCTAGGCATTGGCAAGGAATACATGCAAGAGAAATTTGAGGAAGGCTTACAGCTATTGTCAGTGAATTGCTACCCTAAAGTGTCTCAAAGTGATACGTCAATAGGTCTGGCAGCACATTCTGATTATGGGCTCCTAACCATCTTGCTCACAAGTTGTCAGGGCCTTGAGGTTGTTGACCGCAGCAGCAACAGCTGGAAAGTGGTCCAGCAACTCCCACATGCATTGCATGTCCATGTAGGAGACCACATGGAAGTTCTAAGCAATGGCCGAATCAAGACTGTTGTGCACCGCGCTGTTCTGAATCCTCAAGAAGCAAGGATTTCTCTCGCTAGCATTCATGGTTTTGCACTGCATGAGAAGGTCTCCAGTGCCAAAGAGCTGGTCGACGAGGAAAATCCACAAAAGTACAAAGAAAGCAGCTTTAATGACTTCCTAGAGCATCTCACTGCCAATATGGACAACAGGCAAAGGAACTTTCTTGAGAGCCTTAGAATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017320