BGIOSGA017326

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Revision as of 04:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017326| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017326, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017326

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017326, complete gene.

LocusTag

OSJNBA0043A12.19

Ensembl Transcript ID

BGIOSGA017326-TA

Ensembl Protein ID

BGIOSGA017326-PA

Length

3541

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33240808..33244348

Sequence Coding Region

33240808..33240892,33240994..33241073,33241280..33241348,33241439..33241496,33241656..33241705
,33241816..33241855,33241955..33242016,33242100..33242213,33242521..33242623
,33242744..33242793,33242906..33243034,33243132..33243383,33243577..33243656
,33243777..33243903,33244019..33244348

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33240808..33244348 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33240808..33244348 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGATCGGACTCGCCGCCCAAGAAATGGGGCCTCAGGGAGCAGCGCGAAGCCTACCTCCGGTGGTTCTCCCTCGCCGACGACGATGGAGATGGGCGCGTGACGGGGAAAGACGCGCTCAAGTTCTTCGCCATGTCGAATCTCTCCCGCCCCGAGCTGAAGCAGGTCTGGGCAATCGCTGATTCCAAGCGTCAGGGTTATCTTGGATTCTCGGAGTTTATGACCGCAATGCAGCTGGTTTCTCTTGCACAAGCTGGGAATGAGATTAGTCAGGACACCCTTGCACATGCAGATTTGGAGACGTTGCTACCTCCGACAATGGAAGGTCTGGACAAAAAACTAAAAAATAATTCTATGAGCAAGAGCAACTCTGATATTGTCGTACGTCATCCGTCAGAATTGCCTGCATCAGCCAACTGGTTTAACTCCAAGTCAGGAAAGAAGATTCCTTTAAGATCAGTTACTTCGATCATCGATGGGTTAAAGAAATCTTACATTGAGAAGTTGAGGCCACTAGAAAAAACATATCAGTTCGATGACTTTGTTTCACCTTTGCTGACTAGCAGTGATTTCGATGCGAAGCCAATGGTCATGTTGCTGGGTCAGTATTCCACAGGAAAAACCACATTCATAAAGCATTTACTGAAGACAAATTATCCAGGTGCTCATATTGGTCCAGAGCCTACAACTGACAGATTTGTTGTTATTACTTCTGGACCTGATGAAAGATGCATCCCTGGAAACACAATTGCCGTGCAAGCAGACATGCCATATAGTGGCTTGTCATCTTTTGGGACAGCATTTCTATCAAAGTTTGAATGTTCTCAGATGCCTCATCCACTACTGGATCATATAACCTTTGTGGACACTCCTGGAGTTTTATCAGGGGAAAAGCAGCGAACACAGCGTAGCTATGACTTCACTGGAGTTACATCATGGTTTGCAGCCAAGTGTGACCTAATTCTTCTCCTATTTGATCCACATAAGCTTGACATCAGTGATGAGTTCAAGCGTGTAATTGGGTCACTCAAAGGGCATGATGATAAAATACGTATAGTTCTGAACAAAGCAGACCAAGTTGATGCACAACAACTCATGAGAGTCTATGGAGCACTGCTATGGTCGCTTGGGAAAGTTCTGAACACACCAGAAGTCATGCGTGTGTACATAGGTTCATTTAACGACAAGCCCATTAGGGAGACAGTAGCTGGGCCACTGGGTAAAGAACTGTTTGAGAAAGAACAAGAAGACCTGCTCTCCGACCTGAATGACATTCCAAAGAAAGCCTGTGACCGTCGAATCAACGAATTCGTGAAGCGTTCGAGGTCAGCCAAGGTCCATGCTCACATAATCAGCCACCTGAAGAAGGAGATGCCGGCGCTGATGGGCAAGGCCAAGGCGCAGCAGCGGCTGCTCGACACCCTCGACGAGCAGTTCGCCAAGGTTCAGAAGGAGCTGCACTTGCCGGCCGGCGACTTCCCCAGCGTGGATGAGTACAGGGAGACACTGAGCGCCTACAACTTCGACAAGTTCGAGAGGCTGAAGCCCAAGCTGGTGCAGGGCGTCGACGACATGCTCGCCTACGACATCCCCGATCTCCTCAAGAGCTTCAGGAACCCCTACGAATGA</cdnaseq>

Protein Sequence

<aaseq>MGSDSPPKKWGLREQREAYLRWFSLADDDGDGRVTGKDALKFFAMSNLSRPELKQVWAIADSKRQGYLGFSEFMTAMQLVSLAQAGNEISQDTLAHADLETLLPPTMEGLDKKLKNNSMSKSNSDIVVRHPSELPASANWFNSKSGKKIPLRSVTSIIDGLKKSYIEKLRPLEKTYQFDDFVSPLLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTNYPGAHIGPEPTTDRFVVITSGPDERCIPGNTIAVQADMPYSGLSSFGTAFLSKFECSQMPHPLLDHITFVDTPGVLSGEKQRTQRSYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVIGSLKGHDDKIRIVLNKADQVDAQQLMRVYGALLWSLGKVLNTPEVMRVYIGSFNDKPIRETVAGPLGKELFEKEQEDLLSDLNDIPKKACDRRINEFVKRSRSAKVHAHIISHLKKEMPALMGKAKAQQRLLDTLDEQFAKVQKELHLPAGDFPSVDEYRETLSAYNFDKFERLKPKLVQGVDDMLAYDIPDLLKSFRNPYE</aaseq>

Gene Sequence

<dnaseqindica>1..85#187..266#473..541#632..689#849..898#1009..1048#1148..1209#1293..1406#1714..1816#1937..1986#2099..2227#2325..2576#2770..2849#2970..3096#3212..3541#ATGGGATCGGACTCGCCGCCCAAGAAATGGGGCCTCAGGGAGCAGCGCGAAGCCTACCTCCGGTGGTTCTCCCTCGCCGACGACGGTTTGCCCCCCATCGCTGAGCACGACGCCCTCTTTATGTTTTTGTCTTCCTCGATCTTTGCCGGTGAAAATGTCTCTGAATCTGTTGGTGTATGTTGGTAGATGGAGATGGGCGCGTGACGGGGAAAGACGCGCTCAAGTTCTTCGCCATGTCGAATCTCTCCCGCCCCGAGCTGAAGCAGGTGCAAATTCTCTTTTAGGCATAATCAGAATTGTAGAAAAAAGGTGCACAATTCTGGACGACAACCGTGATTGTTCGTAGATATATATAAAAAAAGAGAGAGAAAGCCAAACGTTTGGTTATGAAATTATGGTGATGCACATTTTCTTCTGTTATGAAATTATGATCACAATCCACAAGCATTACATTTTTCCTTGGGGCATTTAGGTCTGGGCAATCGCTGATTCCAAGCGTCAGGGTTATCTTGGATTCTCGGAGTTTATGACCGCAATGCAGGTATGTTCGTGACACTGATTTATTTTTGTGGGGCATTTGTATTTGATGCTGCAATTGATATGGTACATTAAAGCACATGCCGATGTGCAGCTGGTTTCTCTTGCACAAGCTGGGAATGAGATTAGTCAGGACACCCTTGCACATGCAGGTAAAACTGATGCAATTAGTAATTATATATACTTTTTTTTAGATAATGGAAATAGGTTACATCTCCGGCCTCTGCCCGTAGGCAGTAATTATATATACTTAGCACTAGTTATATTTCTGAAGAAACTATTGGCATACTCACCATCACCTTTTACATCAGATTTGGAGACGTTGCTACCTCCGACAATGGAAGGTCTGGACAAAAAACTAGTATGTCTGCATCGATCTTTTAGTTTCATTTGCGTTGGAAAATGCTGCAGCTACAGCACACGGACATTTTAATTTCTCTAACCATTTCTCCATTTTTTTGATCCTGAAAGAAAAATAATTCTATGAGCAAGAGCAACTCTGATATTGTCGGTATGGATTGTTACCTTTACCTAGGGGGGAGTTCCTTTTTTTCTCTTGGTTCATTTGGCCCATATATAGTTTCCAACTTTTATCTTGCCAATCATGCAGTACGTCATCCGTCAGAATTGCCTGCATCAGCCAACTGGTTTAACTCCAAGTCAGGAAAGAAGGTACAACAATAACGCAGGTGCTGATAATATGAGTACATATTATTACAAATAGTTTTACATGATGCTAATTATTCTCTGCGCAGATTCCTTTAAGATCAGTTACTTCGATCATCGATGGGTTAAAGAAATCTTACATTGAGAAGTTGAGGCCACTAGAAAAAACATATCAGTTCGATGACTTTGTTTCACCTTTGCTGGTGTGTCACCTCCCTTATGAACTTCAAATTTCACATATACTATTCCATCGCTTGTTGGTGAAATAATGCTTGATACATCTTATCTATTCTGGGTGTGTTTAGTTCACGTCAAAATTGGAAGTTTGGTTGAAATTGGAACGATGTGATGGAAAAGTTGGAAGTTTATGTGTGTAGGAAAGTTTTGATGTGATGGAAAAGTTGGAAGTTTGAAGAAAAAGTTTGGAACTAAACAAGGCCTCTATTCCTCTCAGTTGGCATGCATGACTTCCTAATGGAGCTTTCTACGTCATGTTTTTCCATTTTGTAGACTAGCAGTGATTTCGATGCGAAGCCAATGGTCATGTTGCTGGGTCAGTATTCCACAGGAAAAACCACATTCATAAAGCATTTACTGAAGACAAATTATCCAGGTAAACAGGATGAAATATTGTGTTCCTTTTCCTTCTTATTGAGAATTATATTTTCCATTCTCTTTCTACACATTTTCCCTTGAAAAAAATGTAACAATATCTGAGTTGTTTCTCTTGCAGGTGCTCATATTGGTCCAGAGCCTACAACTGACAGATTTGTTGTTATTACTGTAGGTTCTATATGGAGATGTGTCAATTTGCTTTGCCTAACTTTTGTTTGTTCTACCTAACATATCTCCACTGATCTTCACTTCCCAATGATACATCCTCTCACTACTGCAGTCTGGACCTGATGAAAGATGCATCCCTGGAAACACAATTGCCGTGCAAGCAGACATGCCATATAGTGGCTTGTCATCTTTTGGGACAGCATTTCTATCAAAGTTTGAATGTTCTCAGATGCCTCATCCAGTATATTCCTTCTCTTGCACTGATTATTCTACTTCATATTTTTCATTATGTTGCACTCAGAAAGAAGCTAATTGTTAGCATCTTTTACATTGCCAAGCTACTGGATCATATAACCTTTGTGGACACTCCTGGAGTTTTATCAGGGGAAAAGCAGCGAACACAGCGTAGCTATGACTTCACTGGAGTTACATCATGGTTTGCAGCCAAGTGTGACCTAATTCTTCTCCTATTTGATCCACATAAGCTTGACATCAGTGATGAGTTCAAGCGTGTAATTGGGTCACTCAAAGGGCATGATGATAAAATACGTATAGTTCTGAACAAAGCAGACCAAGTTGATGCACAACAAGTGAGTGTTATTGCTATCCCTTTATAGTGTGATAACATATTCCATTTTCATCCTCTTTATGCATAGGAAAAAAAATCATGGAGTGTGATAAGAAACATTGATTTGTTTTTTACATTTCAAGTGGAGACAAAAAAGAGTAGCTATGTTGATTGAAAGCAAATAACGACTTTGCTTCTGACAAATTTATCCTCAGCTCATGAGAGTCTATGGAGCACTGCTATGGTCGCTTGGGAAAGTTCTGAACACACCAGAAGTCATGCGTGTGTACATAGGGTATGATGTCATCTTCCCCAGAAGCTTCACCTTCACATATGGCAATGCATCGATCAATCTGATGGTTTTGCAAAGATCACACAACCTTACCACTGACAATTCCAAATTAACATGTGACAGTTCATTTAACGACAAGCCCATTAGGGAGACAGTAGCTGGGCCACTGGGTAAAGAACTGTTTGAGAAAGAACAAGAAGACCTGCTCTCCGACCTGAATGACATTCCAAAGAAAGCCTGTGACCGTCGAGTGAGAAGCTCATCATCATCATCATCAGAAACACCTTTTCTTGCAAGATTACATATATATGCTCACTCATGCTAACCATTCATTCTGTCACTGAAAAACTGTTTGGTGTTTTCAGATCAACGAATTCGTGAAGCGTTCGAGGTCAGCCAAGGTCCATGCTCACATAATCAGCCACCTGAAGAAGGAGATGCCGGCGCTGATGGGCAAGGCCAAGGCGCAGCAGCGGCTGCTCGACACCCTCGACGAGCAGTTCGCCAAGGTTCAGAAGGAGCTGCACTTGCCGGCCGGCGACTTCCCCAGCGTGGATGAGTACAGGGAGACACTGAGCGCCTACAACTTCGACAAGTTCGAGAGGCTGAAGCCCAAGCTGGTGCAGGGCGTCGACGACATGCTCGCCTACGACATCCCCGATCTCCTCAAGAGCTTCAGGAACCCCTACGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017326

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017326&oldid=66220"