Os08g0124900

From RiceWiki
Revision as of 12:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0124900| Description = Concanavalin A-like lectin/glucanase domain containing protein| Version = NM_001067428.2 GI:297607911 GeneID:4344559|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0124900

Description

Concanavalin A-like lectin/glucanase domain containing protein

Version

NM_001067428.2 GI:297607911 GeneID:4344559

Length

2284 bp

Definition

Oryza sativa Japonica Group Os08g0124900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1390502..1392785

Sequence Coding Region

1390502..1390514,1391180..1391326,1391428..1392785

Expression

GEO Profiles:Os08g0124900

Genome Context

<gbrowseImage1> name=NC_008401:1390502..1392785 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1390502..1392785 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcttttcgttgaccacttgtgctaccggcctcgtcatcttcttctccgtctgctacctgcagcctccggctcctgtcgccgccttgtccttcaactactccaacttcagctcaaacaaccagaacatcgaaattgaaggcaaagcctccatccgcgtcgggtatattgacatcagcgcgaacgacgctcgggacattttcaccagcgcgggacgggtatcctacaagacaccggtgcagctctgggacgccgccaccggcgaggtggccagcttcaccacaaccttctccttcaacatcgtcaccccgagcgataggaacaacaggggcgacgggatggccttcttcctcggcagctacccatcgaggttgccaaagaatgcctccagtagtggactcggcctcaccaacaagtcctacaccaacgtctccaccggcgaggaccggttcgtcgccgtcgaattcgacacttatctaaaccgcgacttcgaccccaacgcaacctacgaccacatcggcatcgacgtcaactccatcgtatctgtgacgaacgagtccctaccagacttcagcctcaacgggagcatgaccgccaccgtcgactacaacagcagttcgagcatcctgtcagtaaagctgtggataaatgacacaacgaagccgccttacaacctaagcgacaaggttgatctcaagagcgccttgccagagaaggtcaccatcggcttctcggcggcaacgggcgcatcagttgagctacaccagctgacttcttggtacttcaactcgagcccgtcgttcgagcataagcatggacgtgccggagttgaagcgggagcaaccgtcggggcgacgttgttcgttgtgctgctcttcactgttgcagctatcctcatacggcgacgtcgaatcaaaaacaggaaagaggcagaggatgagcaggacataagctcggacagcttagacgacgacggcgagcccatcgtggagatcgagatggggactgggccaagacggttcccatactatgagctcgttgaggccaccaagagcttcgcggcggaagagaagctcgggcaaggcggctttggcgcggtgtaccgaggctacctgagagaacagggcctcgccgtcgccattaaacgcttcgccaaagattcctccaagcaagggaggaaggagtataagtcggagatcaaggtgataagccgactacgccaccgcaatctcgtgcagctcataggctggtgccatggccgcgatgaactcctgcttatttacgagcttgtccccaaccgtagtcttgacatccatctccacggcaatggcaccttcctcacatggccaatgagggtcaagattgttcttgggattggatcagccctcttctaccttcatgaggagtgggggcaatgtgttgtgcaccgtgatatcaagccgagcaatgtcatgcttgacgagttcttcaatgccaagctaggcgactttgggctcgcaagagtttacggttga</cdnaseq>

Protein Sequence

<aaseq>MAGFSLTTCATGLVIFFSVCYLQPPAPVAALSFNYSNFSSNNQN IEIEGKASIRVGYIDISANDARDIFTSAGRVSYKTPVQLWDAATGEVASFTTTFSFNI VTPSDRNNRGDGMAFFLGSYPSRLPKNASSSGLGLTNKSYTNVSTGEDRFVAVEFDTY LNRDFDPNATYDHIGIDVNSIVSVTNESLPDFSLNGSMTATVDYNSSSSILSVKLWIN DTTKPPYNLSDKVDLKSALPEKVTIGFSAATGASVELHQLTSWYFNSSPSFEHKHGRA GVEAGATVGATLFVVLLFTVAAILIRRRRIKNRKEAEDEQDISSDSLDDDGEPIVEIE MGTGPRRFPYYELVEATKSFAAEEKLGQGGFGAVYRGYLREQGLAVAIKRFAKDSSKQ GRKEYKSEIKVISRLRHRNLVQLIGWCHGRDELLLIYELVPNRSLDIHLHGNGTFLTW PMRVKIVLGIGSALFYLHEEWGQCVVHRDIKPSNVMLDEFFNAKLGDFGLARVYG</aaseq>

Gene Sequence

<dnaseqindica>2272..2284#1460..1606#1..1358#atggccggcttttcgttgaccacttgtgctaccggcctcgtcatcttcttctccgtctgctacctgcagcctccggctcctgtcgccgccttgtccttcaactactccaacttcagctcaaacaaccagaacatcgaaattgaaggcaaagcctccatccgcgtcgggtatattgacatcagcgcgaacgacgctcgggacattttcaccagcgcgggacgggtatcctacaagacaccggtgcagctctgggacgccgccaccggcgaggtggccagcttcaccacaaccttctccttcaacatcgtcaccccgagcgataggaacaacaggggcgacgggatggccttcttcctcggcagctacccatcgaggttgccaaagaatgcctccagtagtggactcggcctcaccaacaagtcctacaccaacgtctccaccggcgaggaccggttcgtcgccgtcgaattcgacacttatctaaaccgcgacttcgaccccaacgcaacctacgaccacatcggcatcgacgtcaactccatcgtatctgtgacgaacgagtccctaccagacttcagcctcaacgggagcatgaccgccaccgtcgactacaacagcagttcgagcatcctgtcagtaaagctgtggataaatgacacaacgaagccgccttacaacctaagcgacaaggttgatctcaagagcgccttgccagagaaggtcaccatcggcttctcggcggcaacgggcgcatcagttgagctacaccagctgacttcttggtacttcaactcgagcccgtcgttcgagcataagcatggacgtgccggagttgaagcgggagcaaccgtcggggcgacgttgttcgttgtgctgctcttcactgttgcagctatcctcatacggcgacgtcgaatcaaaaacaggaaagaggcagaggatgagcaggacataagctcggacagcttagacgacgacggcgagcccatcgtggagatcgagatggggactgggccaagacggttcccatactatgagctcgttgaggccaccaagagcttcgcggcggaagagaagctcgggcaaggcggctttggcgcggtgtaccgaggctacctgagagaacagggcctcgccgtcgccattaaacgcttcgccaaagattcctccaagcaagggaggaaggagtataagtcggagatcaaggtgataagccgactacgccaccgcaatctcgtgcagctcataggctggtgccatggccgcgatgaactcctgcttatttacgagcttgtccccaaccgtagtcttgacatccatctccacggcaatggcaccttcctcacatggccaatgaggttatcaaccctcgctagttctatctcaatctttgtgaccgtattaattaacatatattgttaaattaaacttaatagattagctaacttattttttacagggtcaagattgttcttgggattggatcagccctcttctaccttcatgaggagtgggggcaatgtgttgtgcaccgtgatatcaagccgagcaatgtcatgcttgacgagttcttcaatgccaagctaggcgactttgggctcgcaaggttcattgaccacactgtggggatgcggacaatgactgcagtgtccgggacaccaggctatgttgaccctgaatgcttgatcaccggcagagcaagcgtaaagtctgacgtttatagctttggcatcgtcctgctagaggtggcatgcgggaggaaaccgatgagcctactagacagccaaacggatggcgtctttcggctggtcgagtgggcttgggatctgtatggcaagggagatgttctcaaggttgtcgacgtgcgtctcaacgatgactacgatgttacagagatggagcgtgtcatcgttctcgggctctggtgcgcgcaccctgatccgagcgcgcgaccttctattagagacgccatggccatactccaatcgagtggaggctagctgccggtgctaccggccaagatgcccgtgccgacgtacgcgccgccggtgatctcattggatgggctctttgcgtcatctacagggttgtcgtcgtcctcaggtgtgacgcagtcctcgtccacatcgacgacgagtggccatgctactcacacctcgtgttcgtcggttccgtccgattcaaccggtttgaaggactcgtcttcattgctcaagcatcagtcctagcgtttagtttttgttttttttaatttgtttgttcttagtttagagtttacggttga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0124900, RefSeq:Os08g0124900