BGIOSGA017340

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Revision as of 04:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017340| Description = BGIOSGA017340| Definition = Oryza sativa Indica Group BGIOSGA017340, complete gene.| tag = | tid = BGIOSGA017340-TA|...")
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Gene Name

BGIOSGA017340

Description

BGIOSGA017340

Definition

Oryza sativa Indica Group BGIOSGA017340, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA017340-TA

Ensembl Protein ID

BGIOSGA017340-PA

Length

1879

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33527460..33529338

Sequence Coding Region

33527460..33527595,33528235..33528389,33528469..33528564,33528644..33528803,33528889..33529025
,33529124..33529198,33529300..33529338

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33527460..33529338 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33527460..33529338 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGACGGCGGCGGCGGCGCTCGCGGTGACGGACGAACTGGCCTTGCCGCTTCGCGCGGTGGGGGATCTGGCGGCCGCCGCGGGGGTCTCGCGGGAGGAGGTGGTGGTCATCACGCAGTGCGCCTCGCTTGGTGGGAAGTTGCCTTTTGCTGATGCATCAGTTGGTTCTGTTCTTGCTGTCATTAAGAAAGTGGAAAACTTGGGGAATCAGTTCATAACTGAAATAAGCAGGGTTCTCAAAGCTGGAGGCATGGTGCTTGTACAGAGTTCCCCCTCTGATCAGGATCCCAATAATTCTATTGAGCGCAAGCTACTGTTAGGAGGATTTGTTGACGTGCAAGCTTCTGCTGCAAGTTCGCAGGATAATGAGCATTCTGTTAATATTAAGGCAAAGAAGGCCTCTTGGAGCATGGGCTCTTCCTTCCCCCTCAAGAAAGCCACAAAGGGTCTTCCAAAGATTCAGATTGATGATGACTCTGAACTGATTGATGAAGACAGCCTCTTGACTGAGGACGACTTGAAGAAACCAGAACTTCCAGTTGTTGGGGATTGTGAGGTGGGAGCCACAAGGAAGGCATGCAAGAACTGTACTTGTGGCCGGGCTGAGGCTGAGGAGAAGGTGGAGAAGCTAAATCTCACATCAGAACAGATCAATAACCCTCAGTCCGCTTGTGGCAATTGTGGGTTGGGCGATGCATTTCGATGTGGTACTTGCCCATACAGAGGTCTACCAGCATTCAAGCCAGGCGAGAAGATTGCCCTACCTGGCAACTTCCTTGCGGCTGACATGTGA</cdnaseq>

Protein Sequence

<aaseq>MAATAAAALAVTDELALPLRAVGDLAAAAGVSREEVVVITQCASLGGKLPFADASVGSVLAVIKKVENLGNQFITEISRVLKAGGMVLVQSSPSDQDPNNSIERKLLLGGFVDVQASAASSQDNEHSVNIKAKKASWSMGSSFPLKKATKGLPKIQIDDDSELIDEDSLLTEDDLKKPELPVVGDCEVGATRKACKNCTCGRAEAEEKVEKLNLTSEQINNPQSACGNCGLGDAFRCGTCPYRGLPAFKPGEKIALPGNFLAADM</aaseq>

Gene Sequence

<dnaseqindica>1..136#776..930#1010..1105#1185..1344#1430..1566#1665..1739#1841..1879#ATGGCGGCGACGGCGGCGGCGGCGCTCGCGGTGACGGACGAACTGGCCTTGCCGCTTCGCGCGGTGGGGGATCTGGCGGCCGCCGCGGGGGTCTCGCGGGAGGAGGTGGTGGTCATCACGCAGTGCGCCTCGCTTGGTGAGCTTCTCCTCGTCTCCTTGCTTCCCTTTTTCCTGCTATCATATGAGACTCCGATATCGATTAGGATTTTTCGTGTTTAGATTCAATAATATGGAACTGTGCCTAACCCTGTTACGAGCGTTTGTTCTTTGCTGGTTAGGATCAGTTCCAACTCAACAAATCGCAACAGTTCAATCGATTCATGGTAGAGTTCTTCGAAAAACAGTTTGGAGCTCACCATTCCTTTAGTTTCCGACGACTCCCCTTATGATGCTTCATATGCTAATTCCTATATAGATTCATTTCACCATATATGGGACCAAATAGGTTATGAGACAGTGCTATTGGTTGACGAAGGAAAGAAAAGAGTTTCATATTCTCACATCAATCATGAGGAGAAAATTTTGGAGATCATCTCCCTATATGTTTTGTATTGATTATCTAGATTCATTAGTGGCAATATTCAATTCTCACCCATGACTACTACTCCAAAATTGGAGTATGTTCCAAAATTTGGACCCTACAATTGACACACTGTTTTGCTCTGTTATATGTTCAGTTTTGATTTCTGTTATGCTTCAGTATACCTTATCCTTGTAGTATACATGTTGGTTTGTCATAAGCTCATTTTGAACATTTCATGTTGTCATGGTTCAGGTGGGAAGTTGCCTTTTGCTGATGCATCAGTTGGTTCTGTTCTTGCTGTCATTAAGAAAGTGGAAAACTTGGGGAATCAGTTCATAACTGAAATAAGCAGGGTTCTCAAAGCTGGAGGCATGGTGCTTGTACAGAGTTCCCCCTCTGATCAGGATGTATGTACTGTTTTTCCAATTTACTCTATTTTGTAATGTTTAATTTGCACTCCTGATTTTTTGATCTTCTCTTCATCAGCCCAATAATTCTATTGAGCGCAAGCTACTGTTAGGAGGATTTGTTGACGTGCAAGCTTCTGCTGCAAGTTCGCAGGATAATGAGCATTCTGTTAATGTGAGTGATCTAGTGCCATAATATGTGTTAATGCTTCTGTGCGGTCACACTTTCCTGTGCTAACTGAATCACCATGCAGATTAAGGCAAAGAAGGCCTCTTGGAGCATGGGCTCTTCCTTCCCCCTCAAGAAAGCCACAAAGGGTCTTCCAAAGATTCAGATTGATGATGACTCTGAACTGATTGATGAAGACAGCCTCTTGACTGAGGACGACTTGAAGAAACCAGAACTTCCAGTTGGTACTGTTATATAGAACCCTTCAGCTTTGTTCAACATCTATAAATTAAATATGTAGATCCTGAAGGTTTGCTTATGTTTTACCAGTTGGGGATTGTGAGGTGGGAGCCACAAGGAAGGCATGCAAGAACTGTACTTGTGGCCGGGCTGAGGCTGAGGAGAAGGTGGAGAAGCTAAATCTCACATCAGAACAGATCAATAACCCTCAGTCCGCTTGTGGCAATGTGAGCATGACTGCTTTTTAATTAAGTGTTTTCTTTTTTGCCTTTGGTCCTCTCCCTGTGAAAATCCATAGTTTCATCCTGTGAAATGATAATTGCAGTGTGGGTTGGGCGATGCATTTCGATGTGGTACTTGCCCATACAGAGGTCTACCAGCATTCAAGCCAGGCGAGAAGGTAATTATCTCTCCTGACCCTAAATTCTTGATTCATGAGAACACCCAAGATGCCAGTTGAACTTGTTTTTAAGAAACAACTCACTGTTCTCTGATTGGCAGATTGCCCTACCTGGCAACTTCCTTGCGGCTGACATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017340