BGIOSGA017342

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Revision as of 04:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017342| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017342, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017342

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017342, complete gene.

LocusTag

OSJNBA0018M05.19

Ensembl Transcript ID

BGIOSGA017342-TA

Ensembl Protein ID

BGIOSGA017342-PA

Length

1809

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33601311..33603119

Sequence Coding Region

33601311..33601688,33601788..33602044,33602155..33602338,33602481..33603119

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33601311..33603119 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33601311..33603119 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCGCTTCTCATGAACACCGGCGCTGTCTCGATGCCCTTCCCCACCACGCGCACCGCCGCGCGACGGCGAACCAGCAGAAGCAGATGCCAGGCTTCATCTAGCGGCGATAGCAGCAACGAAGGAGGCGGCGAGAGCTACCGCGGGAGGAGCGGGCGCGGTGGGTCGACGACGTGGGTGACGGAGTACGACCTGTACGGGCTGCTGGGCGTGGAGCGGTCGTCGCCGCAGTCGGAGATCAAGGCCGCGTACCGGTCGCTGCAGAAGCGGTGCCACCCCGACGTCGCCGGCGCCAAGGGCCACGACATGGCCATCGTCCTCAACGAGGTCTACTCCCTCCTCTCCGACCCCGCCGCCCGCCTCGCCTACGACCAGGAGCAAGCGAAGCAGTCGGAGTTCGTCGGGTACACGGGGAAGCCGCTCTACTCGGCGTGGTTCGGCGGCGAGGCCGAGCAGCGCGCGGTGTTCGTGGACGAGGTGAGGTGCGTCGGCTGCCTCAAGTGCGCGCTCTACGCCAACAAGACGTTCGCCGTCGAGTCCGTCTACGGCCGCGCCCGCGTCGTCGCGCAGTGGGCCGACGCCGAGGACAAGATCCTCGACGCCATCCAGACATGCCCCGTCGACTGCATCTCGATGGTCGAGAGGTCAGATCTCGCGGCTCTCGAGTTCTTGATGTCCAAACAGCCGCGCGGCAGAGTCCGGGTCTCGGAAGGCAACACCGTGGGCGCTCGCGCACCCGACATCTTCAACGAGGTAACCAAGTTTCAGAAGAGGTTCCAGGAGATGAAGCAGAAGTCTGCCACGAGAGAATCCGAGGAGTCGGAGGCAGCAAGGCAATCGAGGAGCTCGGCAGTTCAGACGATCAGGTCGATCTCGAACTGGTGGTACTGGCAGCCGTTCAGAGCTCCGGCGACCACCGTACTCGCTTCTCTCCACCTGCCGGCGCCGCCGCCTTCTCCTTCCATGCCCGCCGACCCGGTGACGGACAGGCTCCAAGAAGCGGCAGCTCGACGCAAAGCGGGAGGTGCGACGGCGGCGAGGACGGTGGCTTCGTACGCCCGCCGCGACGACTACTGGACTCCGCAGCTGAACCTGCCGTCCCTAGCATCGCCGCCGGAGCGACCTCACCGGAGGCAGAGCGCTTCTCCCCGCAGCCAGACGCGGCGAGCAACCCCCACCGGCGATGGCGGGGTGACATTGGGCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATCTCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATCCAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATCGTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTTCTCGCGAGGAGCGAAGTGAACTTCAGGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MAALLMNTGAVSMPFPTTRTAARRRTSRSRCQASSSGDSSNEGGGESYRGRSGRGGSTTWVTEYDLYGLLGVERSSPQSEIKAAYRSLQKRCHPDVAGAKGHDMAIVLNEVYSLLSDPAARLAYDQEQAKQSEFVGYTGKPLYSAWFGGEAEQRAVFVDEVRCVGCLKCALYANKTFAVESVYGRARVVAQWADAEDKILDAIQTCPVDCISMVERSDLAALEFLMSKQPRGRVRVSEGNTVGARAPDIFNEVTKFQKRFQEMKQKSATRESEESEAARQSRSSAVQTIRSISNWWYWQPFRAPATTVLASLHLPAPPPSPSMPADPVTDRLQEAAARRKAGGATAARTVASYARRDDYWTPQLNLPSLASPPERPHRRQSASPRSQTRRATPTGDGGVTLGSIDLTAPLLMAIISAGFVGYNREEVAGVGGGGIQEHVGGAAALGLVNSFELKIVLASVTWFIIGAAIAGFIQFLARSEVNFRK</aaseq>

Gene Sequence

<dnaseqindica>1..378#478..734#845..1028#1171..1809#ATGGCTGCGCTTCTCATGAACACCGGCGCTGTCTCGATGCCCTTCCCCACCACGCGCACCGCCGCGCGACGGCGAACCAGCAGAAGCAGATGCCAGGCTTCATCTAGCGGCGATAGCAGCAACGAAGGAGGCGGCGAGAGCTACCGCGGGAGGAGCGGGCGCGGTGGGTCGACGACGTGGGTGACGGAGTACGACCTGTACGGGCTGCTGGGCGTGGAGCGGTCGTCGCCGCAGTCGGAGATCAAGGCCGCGTACCGGTCGCTGCAGAAGCGGTGCCACCCCGACGTCGCCGGCGCCAAGGGCCACGACATGGCCATCGTCCTCAACGAGGTCTACTCCCTCCTCTCCGACCCCGCCGCCCGCCTCGCCTACGACCAGGTACGTTGCTTCATCGATCGATCTCTCGCATATACGTACGCACACCAACTGTTCGTACAATTGTTGATGAGGCAATCGATCTGCACGGAACGCATGCAGGAGCAAGCGAAGCAGTCGGAGTTCGTCGGGTACACGGGGAAGCCGCTCTACTCGGCGTGGTTCGGCGGCGAGGCCGAGCAGCGCGCGGTGTTCGTGGACGAGGTGAGGTGCGTCGGCTGCCTCAAGTGCGCGCTCTACGCCAACAAGACGTTCGCCGTCGAGTCCGTCTACGGCCGCGCCCGCGTCGTCGCGCAGTGGGCCGACGCCGAGGACAAGATCCTCGACGCCATCCAGACATGCCCCGTCGACTGCATCTCGTAATCCAACACACCTCTAAATCCCCCAATTAATCTGTGTTCTGCTTGTTGATTTGTCCTGATTTGTTCATCTCCATGGTTGATTTGGTTCGGTTTGTACGGTTGATTAGGATGGTCGAGAGGTCAGATCTCGCGGCTCTCGAGTTCTTGATGTCCAAACAGCCGCGCGGCAGAGTCCGGGTCTCGGAAGGCAACACCGTGGGCGCTCGCGCACCCGACATCTTCAACGAGGTAACCAAGTTTCAGAAGAGGTTCCAGGAGATGAAGCAGAAGTCTGCCACGAGAGAATCCGAGGTAGTAAATCTGATGATTTGATCCAGTATTCAAGTAGCCTTGTGATTTCATAAGGGACTCACTAATCACCATTAACAAGCAGAGCTGAAGCTGAGCACAGTAAGCTCGGGTTAACTAATCTCGCTCGCCCGCGTGCGTGCAGGAGTCGGAGGCAGCAAGGCAATCGAGGAGCTCGGCAGTTCAGACGATCAGGTCGATCTCGAACTGGTGGTACTGGCAGCCGTTCAGAGCTCCGGCGACCACCGTACTCGCTTCTCTCCACCTGCCGGCGCCGCCGCCTTCTCCTTCCATGCCCGCCGACCCGGTGACGGACAGGCTCCAAGAAGCGGCAGCTCGACGCAAAGCGGGAGGTGCGACGGCGGCGAGGACGGTGGCTTCGTACGCCCGCCGCGACGACTACTGGACTCCGCAGCTGAACCTGCCGTCCCTAGCATCGCCGCCGGAGCGACCTCACCGGAGGCAGAGCGCTTCTCCCCGCAGCCAGACGCGGCGAGCAACCCCCACCGGCGATGGCGGGGTGACATTGGGCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATCTCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATCCAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATCGTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTTCTCGCGAGGAGCGAAGTGAACTTCAGGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017342