BGIOSGA017346

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Revision as of 04:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017346| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017346, complete gene.| tag = H0103C0...")
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Gene Name

BGIOSGA017346

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017346, complete gene.

LocusTag

H0103C06.13

Ensembl Transcript ID

BGIOSGA017346-TA

Ensembl Protein ID

BGIOSGA017346-PA

Length

3448

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33658658..33662105

Sequence Coding Region

33658658..33658834,33659509..33659591,33659743..33660066,33660184..33660439,33660788..33660868
,33660943..33661050,33661137..33661166,33661312..33661449,33661574..33661611
,33661695..33661794,33662031..33662105

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33658658..33662105 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33658658..33662105 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCTTCCGCAGCGGCGCTCGCCTGGCGCCGCTCCCTCCGCGACGCCCTCCTGCGCGGCTCCGCGTGGCGCGGCGCGCCCGCCGCCAACTCCGCCGCCGCGCGGTTGGCCAGCACGGCCTCCGCATCCGAAGCGGCGGCTGGTCCGAAGAAGGTGCCTCCGCCTCCCCGCAAGGGAAGGCTTTTAACTGGAGCCATGATAGGGTTGGCAATTGCTGGAGGTGCCTACGTGAGTACCGCCGATGAAGCCAAGTTTTGTGGCTGGTTATTCAAGTCCACACAACTCGTGAATCCACTTTTTGCACTGCTTGATGCAGAGTTTGCTCATCGCTTGGCAGTTACTGCTGCTTCCCATGGATTTGTTCCAAGAGAAAAAAGACCTGATCCATCAGTTCTTGGGCTAGAAATTTGGGGTAGGAAGTTTACAAATCCAATTGGTCTAGCTGCTGGCTTTGATAAAAACGCCGAGGCAGTTGAAGGCCTATTAGGTATGGGATTTGGCTTTGTGGAAGTTGGCTCTGTGACCCCTCTTCCTCAGGAGGGAAATCCTAAGCCTCGCATATTCAGATTACGAGAACACGGTGCGGTAATCAATCGTTGCGGATTTAATAGTGAAGGAATTGTGGTAGTCGCTAAGCGTCTTGGTGCTCAACATGGTAAGCGTAAGATGGAAGAGACTTCAAGCTCCACATCTCCCACAACCAGCGACGTGAAGCAAGGAGGGAAAGCAGGGCCTGGAATCTTGGGAGTCAATCTTGGGAAGAACAAGATCAGCGAAGATGCTACTGCTGACTACGTGCAAGGAGTTCATACACTATCACAATATGCTGATTACTTGGTCATAAATGTCTCTTCCCCAAATACTCCTGGTCTTCGCAAATTACAAGGTAGAAAACAGTTGAAAGATCTCGTGAAGAAGGTGCAAGCTGCAAGAGACGAGATGCAATGGGCTGAAGATGGTCCTCCACCATTGCTTGTTAAGATCGCACCGGACTTGTCTAAGCAAGATCTTGAGGATATTGCTGCGGTTGCTCTTGCTCTTAGGTTGGATGGCCTGATTATATCAAACACTACTATTTCAAGACCTTCTCCTGCAGACACACATCCATTGGCTCAGGAAGCTGGTGGACTAAGTGGCAAACCTTTATTTGACCTATCCACTAATGTTCTCAGGGAGATGTATATCCTTACCCGGGGAAAGATTCCCCTCATAGGCTGTGGTGGTGTAAGTAGTGGCGAGGATGCATACAAGAAGATCCGTTCTGGAGCTACACTTGTTCAGCTTTACACTGCATTTGCCTATGGTGGCCCAGCTCTTATACCCAGAATAAAGGCTGAGCTGGCTGAATGTTTGGAAAGAGATGGTTTCAAATCTGTTCAGGAAGCTGTTGGGGCAGATTTCAAATGA</cdnaseq>

Protein Sequence

<aaseq>MSSSAAALAWRRSLRDALLRGSAWRGAPAANSAAARLASTASASEAAAGPKKVPPPPRKGRLLTGAMIGLAIAGGAYVSTADEAKFCGWLFKSTQLVNPLFALLDAEFAHRLAVTAASHGFVPREKRPDPSVLGLEIWGRKFTNPIGLAAGFDKNAEAVEGLLGMGFGFVEVGSVTPLPQEGNPKPRIFRLREHGAVINRCGFNSEGIVVVAKRLGAQHGKRKMEETSSSTSPTTSDVKQGGKAGPGILGVNLGKNKISEDATADYVQGVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKVQAARDEMQWAEDGPPPLLVKIAPDLSKQDLEDIAAVALALRLDGLIISNTTISRPSPADTHPLAQEAGGLSGKPLFDLSTNVLREMYILTRGKIPLIGCGGVSSGEDAYKKIRSGATLVQLYTAFAYGGPALIPRIKAELAECLERDGFKSVQEAVGADFK</aaseq>

Gene Sequence

<dnaseqindica>1..177#852..934#1086..1409#1527..1782#2131..2211#2286..2393#2480..2509#2655..2792#2917..2954#3038..3137#3374..3448#ATGTCGTCTTCCGCAGCGGCGCTCGCCTGGCGCCGCTCCCTCCGCGACGCCCTCCTGCGCGGCTCCGCGTGGCGCGGCGCGCCCGCCGCCAACTCCGCCGCCGCGCGGTTGGCCAGCACGGCCTCCGCATCCGAAGCGGCGGCTGGTCCGAAGAAGGTGCCTCCGCCTCCCCGCAAGGTAAGGGAGCCATTCCTGTTTCTGATCTCTCCTCGGCATTTGCGCATACACCTCACGTGCGTCGCTCTTACTGAGCTATGTGGCGCTGCCTTTGCTCAACAAGAGTTGGGGAACGCGACATGTGGTGGATCGATTACTTATGAGTCAGTAGATGGCATACTGCGTATAACCTTAGTTCCATTCGCTGATGGTGATGCTGCTGATGCTAGACTCAATGGTGTTGATCTGTTCTACACTTCCATTCCTTCTGAACGCACTGCATCTTTCCACAGAGATAACTTTTTCGTTAGCTTTTGTACCACACACGTTTGTATTCCGTCTGGACATGTTGATATCATGAAATTATAAAGAGAGGTTCGGATTGCTATTGTTTGTGTACATGAAGAATGCACAATGGGCACCTGTTCTTCGAGATTTCCACTTTTCTTTTAAAAAAAAATATATCCAGGATTATTCTTTTCCTATAGCGCCAATCTGGTATTTTTTGCAATTGAATCTTGACGATATATTAATTGATTGCTTGTGAACGATCTCATGTGAGGTTGAGCGGCATTGTGGCAATTGCTGTATTTTATTCATGTAAAAATAGTACCTGTATTTTACCACATTGATGATTTGTTATTTTGTTTTAACTCAGTTTGTTTCTGTTTCTCATTACTTATTTACTTTGGCAGGGAAGGCTTTTAACTGGAGCCATGATAGGGTTGGCAATTGCTGGAGGTGCCTACGTGAGTACCGCCGATGAAGCCAAGTTTTGGTACATGACATTTTCAATCATAACTTCTCTACCATTAGTTGTACTTCTCTTATGTGCTTGAATTTTGCGTTATCTGGGTATCTAGGAGTTTTTGGTATATTTTTGGCTAAGTGCCTCTTCACTAATAACTATATCCTTTCTGATCCTGCAGTGGCTGGTTATTCAAGTCCACACAACTCGTGAATCCACTTTTTGCACTGCTTGATGCAGAGTTTGCTCATCGCTTGGCAGTTACTGCTGCTTCCCATGGATTTGTTCCAAGAGAAAAAAGACCTGATCCATCAGTTCTTGGGCTAGAAATTTGGGGTAGGAAGTTTACAAATCCAATTGGTCTAGCTGCTGGCTTTGATAAAAACGCCGAGGCAGTTGAAGGCCTATTAGGTATGGGATTTGGCTTTGTGGAAGTTGGCTCTGTGACCCCTCTTCCTCAGGAGGGAAATCCTAAGCCTCGCATATTCAGATTACGAGAACACGGGTAAGCATTTTAGTTGCCTTCTCTGTATTCAAACTGCCCCATCCTAATATAATTTCAAAAATTTTGAATGTTCCTGAATAATTTTTTCTGCTGCTATTTTTTTTTATTTCCCTGCAGTGCGGTAATCAATCGTTGCGGATTTAATAGTGAAGGAATTGTGGTAGTCGCTAAGCGTCTTGGTGCTCAACATGGTAAGCGTAAGATGGAAGAGACTTCAAGCTCCACATCTCCCACAACCAGCGACGTGAAGCAAGGAGGGAAAGCAGGGCCTGGAATCTTGGGAGTCAATCTTGGGAAGAACAAGATCAGCGAAGATGCTACTGCTGACTACGTGCAAGGAGTTCATACACTATCACAATATGCTGATTACTTGGTATTCATCCTCTTCTCTTCAAGAAAACCTCACATGGATGTGTTTCTACTTGAACCTAAACATACCATTTGTTCACATTGATTGGTTCACACTAGTTTTGCGCACGAGTGAGAGTGGGTGGGGAGTGGGTGATGGGTGGGGGGCTTTGAGGAACTGTTCAGCAACGAAAAAGAAAATGCCTCTTTTCGGCTCTTCGGTCCTGTCCATCTGTTGAATGGTTTGTGCTCAGCACATAGAGTATGGGAAGTAATGACACTCAACTACACTTACAAGGGTTCCTTTTTTTACCCCTGTTTGTATCTGCCAAGGTCGGCCATTATGTTAAGAATGATATACTTTGAACTGCAGGTCATAAATGTCTCTTCCCCAAATACTCCTGGTCTTCGCAAATTACAAGGTAGAAAACAGTTGAAAGATCTCGTGAAGAAGGTCAGTCATTTCCTTGAAGTGCATCCTTTGTTTGTCTTCATACAAACTTTGTTTGACCTATGCTGCATGTACAGGTGCAAGCTGCAAGAGACGAGATGCAATGGGCTGAAGATGGTCCTCCACCATTGCTTGTTAAGATCGCACCGGACTTGTCTAAGCAAGATCTTGAGGATATTGCTGCGGTAACATAGTTAACTTAGCCTTGTTTTCTGTGCTCTTCCATTATTGAGTTGAAAATTTTCTTATGCTTTCTCATTATGTTCTCTAGGTTGCTCTTGCTCTTAGGTTGGATGGCCTGGTAAGCTATGGAATTCTTCCTTATTGATTTTACTGACGTTAACTAGCACACTCCTATTTAACTTCCATGCCCAATCATTTTACGCTTCTCTTCTGGTTTTGTACTGATGTTTGTTTATTCTTTTATTATGTTGCTAACTGCACAGATTATATCAAACACTACTATTTCAAGACCTTCTCCTGCAGACACACATCCATTGGCTCAGGAAGCTGGTGGACTAAGTGGCAAACCTTTATTTGACCTATCCACTAATGTTCTCAGGGAGATGTATATCCTTACCCGGGTATATTTGTTGCCCCTATTGCTTTCTTGGATATATAGTAGCATACCTCTTTGAATTAACATGATTTTTCTGTCATTGTATTTTACTCCAATGTCCATGAATGACTCCTGCATTTCTGTTACAGGGAAAGATTCCCCTCATAGGCTGTGGTGGTGTAAGTAGGTAATGTCAGTCTCTGCATTTGCTTTTTTAAATTAAAATACCAACACCCAATATTCAATCAAAGTTTATTTATGTTATTACAGTGGCGAGGATGCATACAAGAAGATCCGTTCTGGAGCTACACTTGTTCAGCTTTACACTGCATTTGCCTATGGTGGCCCAGCTCTTATACCCAGAATAAAGGTCATAAGTGAAACATATTTGTTATATCCCAAGCTCGCATCACATGCTCACTATCTTTGTCATAATGGACTATATATACACTGCTAGCCTCTTCTTTTCCCTTCTATTTTTTTTTTAGAGAAAGACCATACGGCCCAGCCTATATTGAAGGCCAAAACGGCAACTTTTCCCTTCTATATGTGTTAAATGTATCACTTGTGAGTTCTGATACTTGTATATTATTTGACCATTTTCAGGCTGAGCTGGCTGAATGTTTGGAAAGAGATGGTTTCAAATCTGTTCAGGAAGCTGTTGGGGCAGATTTCAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017346

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017346&oldid=66240"