BGIOSGA017350

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Revision as of 04:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017350| Description = BGIOSGA017350| Definition = Oryza sativa Indica Group BGIOSGA017350, complete gene.| tag = | tid = BGIOSGA017350-TA|...")
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Gene Name

BGIOSGA017350

Description

BGIOSGA017350

Definition

Oryza sativa Indica Group BGIOSGA017350, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA017350-TA

Ensembl Protein ID

BGIOSGA017350-PA

Length

3626

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33757119..33760744

Sequence Coding Region

33757119..33757307,33757453..33757518,33757618..33757686,33758184..33758219,33758653..33758718
,33758992..33759060,33759170..33759247,33759450..33759528,33759642..33759736
,33759832..33759916,33760166..33760347,33760457..33760575,33760738..33760744

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33757119..33760744 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33757119..33760744 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCCGTCGCACCTCAACGGCCACTCCCCCCTCGCGCGCCGCCGCCCTCGCCTCTCCGCCGCCTCGCCGCCAGCCACCGGGGATTCCGATGCGGCGGCGGCGGCGGCGGACGCTCCGCTGGCGGAGCACGACCGCATCTACTTCCAGTCATACTCCCACATCGGAATCCACGAGGCCATGATCAAGGATCGCGTTAGGACGGATGCTTACCGCTCTGCCATCATGCACCACCAGAAGTTCATCGAGGGGAAGGTTGTGATGGATGTGGGGTGTGGAACTGGAATACTCTCGGTGTTCTGTGCTCGCGCTGGTGCAAAATGTGTGTATGCAGTGGAAGCTAGTGAAATGGCAACTCAGGCTCGTGAAATTGTAAAGGCGAATAATCTGGATGATAAGGTCGTCGTTGTTCATGGACGCGTTGAGGATGTTGAAGTTGAGGATAAGGTTGATGTGATAATATCAGAGTGGATGGGTTATATGCTTCTCTATGAGAGTATGCTGCCTAGTGTCCTGTTTGCAAGGGATAAATGGCTTAAACCTGGTGGTCTTATCCTTCCATCTCATGCTACGCTCTTCATGGCACCCATAACAAATTCTGAGAGGTATGAAGGAAGTGTTGATTTCTGGTCTGATGTCTATGGCATAAATATGTCTGCACTTGTGCCACTTGCCAAAAAGTTTACATCGGAGGAGCCCTCCATTGAAATAATCGGTGGAGAGAATGTTTTGAGCTGGCCATTTGTGGTCAAACACATAGATTGCTACACTTTTAAGGCCGAGGAGCTCAAATCTATCACAACTAAATACAAAGTTTCATCCATGATGTTAGCTCCCATTCATGGCTTTGGTTTATGGTTTGAAGTGGAGTTCAATGGCCCTTCAAATCCCACAGACAAATCTCCTTCCGATTTGAATCCACTCGATGTTATTCGTACGAAAAGGCGCCGAGGATCAGAAGATCCAGTGGTGCTATCCACAGCCCCAGAGGATGAGCCAACTCATTGGCATCAGACTATTCTGTACTTCCCTGATCCTATAGAGGTGAAACAAGACCAAATTATAGAAGGCTCTGTAAAAGTGTCTCAGAGTGAGGAAAACCCACGTTTTCTGAATATTCAACTAGATTGCACGATGTGA</cdnaseq>

Protein Sequence

<aaseq>MLPSHLNGHSPLARRRPRLSAASPPATGDSDAAAAAADAPLAEHDRIYFQSYSHIGIHEAMIKDRVRTDAYRSAIMHHQKFIEGKVVMDVGCGTGILSVFCARAGAKCVYAVEASEMATQAREIVKANNLDDKVVVVHGRVEDVEVEDKVDVIISEWMGYMLLYESMLPSVLFARDKWLKPGGLILPSHATLFMAPITNSERYEGSVDFWSDVYGINMSALVPLAKKFTSEEPSIEIIGGENVLSWPFVVKHIDCYTFKAEELKSITTKYKVSSMMLAPIHGFGLWFEVEFNGPSNPTDKSPSDLNPLDVIRTKRRRGSEDPVVLSTAPEDEPTHWHQTILYFPDPIEVKQDQIIEGSVKVSQSEENPRFLNIQLDCTM</aaseq>

Gene Sequence

<dnaseqindica>1..189#335..400#500..568#1066..1101#1535..1600#1874..1942#2052..2129#2332..2410#2524..2618#2714..2798#3048..3229#3339..3457#3620..3626#ATGCTGCCGTCGCACCTCAACGGCCACTCCCCCCTCGCGCGCCGCCGCCCTCGCCTCTCCGCCGCCTCGCCGCCAGCCACCGGGGATTCCGATGCGGCGGCGGCGGCGGCGGACGCTCCGCTGGCGGAGCACGACCGCATCTACTTCCAGTCATACTCCCACATCGGAATCCACGAGGCCATGATCAAGGTAAGCCGCCATGCCCACATCCGTACCCGATTCAGTCGCCCTCTCCGTCCAAACCCTAAACCCCCACAACCCCTGGGCCGACCCGTGTTGCGAGTCCGAAGTCGCGATTTGGTGGGGATGACGTGTGTTCGGTTTCGTTGGGCAGGATCGCGTTAGGACGGATGCTTACCGCTCTGCCATCATGCACCACCAGAAGTTCATCGAGGGGAAGGTAAATTTGCTCGCCGAATTGGGGGTGGATGATTATTGTGTGCTGTTGGGATTGGATTCCAAATTTCGGTGATTGATTTCGAAACTTTATGCTATGCAGGTTGTGATGGATGTGGGGTGTGGAACTGGAATACTCTCGGTGTTCTGTGCTCGCGCTGGTGCAAAATGTGTAAGCTACAAAATCCCTGTGCTGAGATGATTGGCCAATTTAAATGCATAGCATAATGTTTGGATCATGCTTGCAAAACTAATTTGACCGTGCTCTCTCATCCAGTGAATCCTACTTTAGTGTAAAGAAGTACATTTTGTGCTGATTCAGAGGTACTAGTATAGTTTTGCATGCTTGCAAATTGAGCAGCGATAAGTGTTGTAAGATGGATTTTTTTCAATGCTTCATTTTGTTGTGCTATACAAAAGGAAAAACCAGCTCAGTTCTTGTTTGTGAAAGAAAAACAGCTTTTAATTTTATCATTTCTATGTCCTAACAAAAGTGACATGGATCTGTGTGTGCTAACTAACTGATGGCAGCTGTGTTTTTCCCTGATTCAACTAGATGTTAAGTCTTGTAGTATATGGCACTCTTAACGTATTTTTCTGTTTTCACTGGTCCATTTGTCTGCCTTATAACAGTGAACTTTTTCCATGTGTATTCAAATGGACTTACAGGTGTATGCAGTGGAAGCTAGTGAAATGGCAACTCAGGTAACATTATTTTTTAGGATATATACTCTAATATTAAATTGTATTCTTTCCATATCTTGTTTGTTGTTCTTTTGTTGTTTATGTGTGGACCAATTTTTTAGTTATACAATATAAGGACGTAGAATACACGGTTGCAAAATGACAGCACTCAAGTGTATTCATGAACTAGGTGTTTGTAGTGGTATCCATAACAAGGATTGACAGTGAAGCTTCCTACTCATCTTCTATAAAATACCAGTTACCAGTTAATACTACCAGTCACAACTCACAAGAGAGTATATAACAATATATTAAAATAGTGTATTGATCTTGATCTTTGCAGATATTGAATATTAGTGTCATATTTATAGTAATCTAGCGGATCATACTATTTTGAAAAGTAACTACTCTTATGGGTATGCTGCGGCAAATAAATGTACTCCTTTTTGCGCAGGCTCGTGAAATTGTAAAGGCGAATAATCTGGATGATAAGGTCGTCGTTGTTCATGGACGCGTTGAGGTAAGATTCTGCATTTATGTTTTTTTTGGTTATATGTATTCTCTCAATCCCTAAGTATTTCACTGGAAGAGTTATCTGCATTTGCCAAGTAGGGTCTACTAGATTGAATACAAAGTTTGGATTATCAGGGCATAAAGCTTGTGTTTCCTTCTCTATTTTCACATGATACAATCTCTGAGTCATTATTGTTTGAAAATATATTTACATTAGTATTTTTACGTCTTTACTTTTTTTATCTGCATTTTTTTAACTTACACTGAATTGACAGTGCAGGATGTTGAAGTTGAGGATAAGGTTGATGTGATAATATCAGAGTGGATGGGTTATATGCTTCTCTATGAGGTTCATTCTTTTATATGGTTGTTTTTTGCGTCACAATTTGATATTCTCTTATCTTCCCTAGTTCTATCTTCTTCTGATTTCTCTAGTTCTGTTTTCGTCTGATCTGCAGAGTATGCTGCCTAGTGTCCTGTTTGCAAGGGATAAATGGCTTAAACCTGGTGGTCTTATCCTTCCATCTCATGCTACGGTATATAATTATCACATGTCATTTTATTTCTCATGCATGTGCATATAAAATAAGATAGACCTAGAGAAAAAAAATCCTACTTTTGCAACCAATATCTTACCTATCTTACATGTGCATACAAATTACAGAACAGTTCTAAGCCTTGGCACAAATTGCAGAACAGTTCTAAGCCTGATTAACTATGTATCCTTCTTTTCGATAGCTCTTCATGGCACCCATAACAAATTCTGAGAGGTATGAAGGAAGTGTTGATTTCTGGTCTGATGTCTATGGCATAAATAGTAAGTTACTATTGTTTTGTTATTAGAGCCGCATTATGCATCACATTCACCATCTCATGTTGGATGCTGATTTTTGCACACTATAACTTGATTTCGTGCTTGTACTGCTACAGTGTCTGCACTTGTGCCACTTGCCAAAAAGTTTACATCGGAGGAGCCCTCCATTGAAATAATCGGTGGAGAGAATGTTTTGAGCTGGCCATTTGTGGTGAGTCTTCACAAGACTGTTGTGGATAATACTTTTCAAATAAATAACCATATTTACCTGTTGAGGCTTATTAACTTCTTTATGTCTACTTACAGGTCAAACACATAGATTGCTACACTTTTAAGGCCGAGGAGCTCAAATCTATCACAACTAAATACAAAGTTTCATCCATGATGTTAGGTGATTCGTCTCTTTTCCTGTATAATATTATTCCTGATGCCGAATCTGCTATTTGACTCGAATCTATAAAATCTTCTTCAATCTTCATCCACATACAGTTTATCATATGAAACATCAATGCTCAGCTGCATTTTTCAATGTTTATTCAGTTCTGAAACTACTGCTCGGTCTTTGATTGCTCATCTTTCTGTTTATACACCATACATATCCTATCTTAATTTGCTGATAGAAAATATCTTCCATGTGAAGCTCCCATTCATGGCTTTGGTTTATGGTTTGAAGTGGAGTTCAATGGCCCTTCAAATCCCACAGACAAATCTCCTTCCGATTTGAATCCACTCGATGTTATTCGTACGAAAAGGCGCCGAGGATCAGAAGATCCAGTGGTGCTATCCACAGCCCCAGAGGATGAGCCAACTCATTGGCATCAGGTTCTGATTTCTGAAAATAGTGTTATCCTTAATTGATCTATTCAATATATTACGCTATTCCTGCTCTTCTTGGTGTAAATGTGTAATATGGTCATTTCTTGTTCTGCAGACTATTCTGTACTTCCCTGATCCTATAGAGGTGAAACAAGACCAAATTATAGAAGGCTCTGTAAAAGTGTCTCAGAGTGAGGAAAACCCACGTTTTCTGAATATTCAACTAGATTGCACGTAAGTTCTTACTAGAGATTGCTATTTTGTCGTCCGGCTCAACACAGTTGCTCGATAGATGTTATAATCTTGTAGTTACATGGATTCAGATTTAGCCAAGCTACACAAGCACTCTGAATTCCTTATAGCATGCTCTGTTTTGAATTTTGTCCATGGTGTCAGGATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017350

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017350&oldid=66244"