BGIOSGA017356

From RiceWiki
Revision as of 04:43, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017356| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017356, complete gene.| tag = H0801D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017356

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017356, complete gene.

LocusTag

H0801D08.7

Ensembl Transcript ID

BGIOSGA017356-TA

Ensembl Protein ID

BGIOSGA017356-PA

Length

1285

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33831342..33832626

Sequence Coding Region

33831342..33831398,33831520..33832626

Genome Context

<gbrowseImage1> name=IndicaChromosome04:33831342..33832626 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:33831342..33832626 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCTCCAAGTTCAGGCCGCACTCCTGCCCTCTGCTCTCTCTGTCCCCAAGAAGGGTAACTTGAGCGCGGTGGTGAAGGAGCCGGGGTTCCTTAGCGTGAGCCAGAAGGCCAAGAAGCCGTCGCTGGTGGTGAGGGCGGTGGCGACGCCGGCGGCGCCGGTGGCGAGCCCCGGCGCGGGCACGTCGAAGGCGGACGGGAAGAAGACGCTGCGGCAGGGGGTGGTGGTGATCACCGGCGCGTCGTCGGGGCTCGGGCTCGCGGCGGCGAAGGCGCTGGCGGAGACGGGGAAGTGGCACGTGGTGATGGCGTGCCGCGACTTCCTGAAGGCGGCGACGGCGGCGAAGGCGGCGGGGATGGCGGCGGGGAGCTACACCGTCATGCACCTGGACCTCGCCTCCCTCGACAGCGTCCGCCAGTTCGTGGACAACTTCCGGCGCTCCGGCATGCCGCTCGACGCGCTGGTGTGCAACGCCGCCATCTACCGGCCGACGGCGCGGCAGCCGACGTTCACCGCCGACGGGTACGAGATGAGCGTCGGGGTGAACCACCTGGGCCACTTCCTCCTCGCCCGCCTCATGCTCGACGACCTCAAGAAATCCGACTACCCGTCGCGGCGGCTCATCATCCTCGGCTCCATCACCGGCAACACCAACACCCTCGCCGGCAACGTCCCTCCCAAGGCCGGGCTAGGCGACCTCCGGGGGCTCGCCGGCGGGCTCCGCGGGCAGAACGGGTCGGCGATGATCGACGGCGCGGAGAGCTTCGACGGCGCCAAGGCGTACAAGGACAGCAAGATCTGTAACATGCTGACGATGCAGGAGTTCCACCGGAGATTCCACGAGGAGACCGGGATCACGTTCGCGTCGCTGTACCCGGGGTGCATCGCGACGACGGGCTTGTTCCGCGAGCACATCCCGCTGTTCCGGCTGCTGTTCCCGCCGTTCCAGCGGTTCGTGACGAAGGGGTTCGTGTCGGAGGCGGAGTCCGGGAAGCGGCTGGCGCAGGTGGTGGGCGACCCGAGCCTGACCAAGTCCGGCGTGTACTGGAGCTGGAACAAGGACTCGGCGTCGTTCGAGAACCAGCTCTCGCAGGAGGCCAGCGACCCGGAGAAGGCCAGGAAGCTCTGGGACCTCAGCGAGAAGCTCGTCGGCCTCGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MALQVQAALLPSALSVPKKGNLSAVVKEPGFLSVSQKAKKPSLVVRAVATPAAPVASPGAGTSKADGKKTLRQGVVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKAATAAKAAGMAAGSYTVMHLDLASLDSVRQFVDNFRRSGMPLDALVCNAAIYRPTARQPTFTADGYEMSVGVNHLGHFLLARLMLDDLKKSDYPSRRLIILGSITGNTNTLAGNVPPKAGLGDLRGLAGGLRGQNGSAMIDGAESFDGAKAYKDSKICNMLTMQEFHRRFHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQRFVTKGFVSEAESGKRLAQVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDPEKARKLWDLSEKLVGLA</aaseq>

Gene Sequence

<dnaseqindica>1..57#179..1285#ATGGCTCTCCAAGTTCAGGCCGCACTCCTGCCCTCTGCTCTCTCTGTCCCCAAGAAGGTAACAATGCGCACCCAAAAATCATCTGCATTGTTGAATTCTGTCAAAAATGGATTTATTTGTGTGAAGTTTGTGCATTTTGAACAAGTTTTTGATTGGATTATGTGTGACGACTGATCAGGGTAACTTGAGCGCGGTGGTGAAGGAGCCGGGGTTCCTTAGCGTGAGCCAGAAGGCCAAGAAGCCGTCGCTGGTGGTGAGGGCGGTGGCGACGCCGGCGGCGCCGGTGGCGAGCCCCGGCGCGGGCACGTCGAAGGCGGACGGGAAGAAGACGCTGCGGCAGGGGGTGGTGGTGATCACCGGCGCGTCGTCGGGGCTCGGGCTCGCGGCGGCGAAGGCGCTGGCGGAGACGGGGAAGTGGCACGTGGTGATGGCGTGCCGCGACTTCCTGAAGGCGGCGACGGCGGCGAAGGCGGCGGGGATGGCGGCGGGGAGCTACACCGTCATGCACCTGGACCTCGCCTCCCTCGACAGCGTCCGCCAGTTCGTGGACAACTTCCGGCGCTCCGGCATGCCGCTCGACGCGCTGGTGTGCAACGCCGCCATCTACCGGCCGACGGCGCGGCAGCCGACGTTCACCGCCGACGGGTACGAGATGAGCGTCGGGGTGAACCACCTGGGCCACTTCCTCCTCGCCCGCCTCATGCTCGACGACCTCAAGAAATCCGACTACCCGTCGCGGCGGCTCATCATCCTCGGCTCCATCACCGGCAACACCAACACCCTCGCCGGCAACGTCCCTCCCAAGGCCGGGCTAGGCGACCTCCGGGGGCTCGCCGGCGGGCTCCGCGGGCAGAACGGGTCGGCGATGATCGACGGCGCGGAGAGCTTCGACGGCGCCAAGGCGTACAAGGACAGCAAGATCTGTAACATGCTGACGATGCAGGAGTTCCACCGGAGATTCCACGAGGAGACCGGGATCACGTTCGCGTCGCTGTACCCGGGGTGCATCGCGACGACGGGCTTGTTCCGCGAGCACATCCCGCTGTTCCGGCTGCTGTTCCCGCCGTTCCAGCGGTTCGTGACGAAGGGGTTCGTGTCGGAGGCGGAGTCCGGGAAGCGGCTGGCGCAGGTGGTGGGCGACCCGAGCCTGACCAAGTCCGGCGTGTACTGGAGCTGGAACAAGGACTCGGCGTCGTTCGAGAACCAGCTCTCGCAGGAGGCCAGCGACCCGGAGAAGGCCAGGAAGCTCTGGGACCTCAGCGAGAAGCTCGTCGGCCTCGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017356