BGIOSGA017377

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Revision as of 04:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017377| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017377, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017377

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017377, complete gene.

LocusTag

OSJNBA0088H09.1

Ensembl Transcript ID

BGIOSGA017377-TA

Ensembl Protein ID

BGIOSGA017377-PA

Length

5033

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34100808..34105840

Sequence Coding Region

34100808..34100919,34101375..34101513,34101981..34102052,34102132..34102275,34102374..34102523
,34103205..34103312,34103377..34103447,34104025..34104273,34104346..34104551
,34104622..34104754,34104864..34105021,34105148..34105369,34105595..34105840

Genome Context

<gbrowseImage1> name=IndicaChromosome04:34100808..34105840 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:34100808..34105840 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCATTGTTGGGGCGGTGCTTCCTCCGTCCTCCGGCTCCTCCTCGCGTTGCAGTGCGGGGTGGTGGTGGTGGTGTTGCAGTGCTCGGCGAATGCGTTGGGCAGTGACGTCTCGGCGCTCATCGCGTTCAAGCGCGCAATCATCGAGGACCCCCGGTCGGCGCTCGCGGACTGGAGCGATGCGGACGGGAACGCCTGCGACTGGCACGGGGTGATCTGCTCCTCGCCGCAGGGCTCCGTGATCTCCCTGAAGCTGTCAAACTCGTCGCTGAAGGGATTTATCGCGCCTGAACTTGGACAGCTGAGCTTCTTGCAAGAGCTGTATTTGGATCGCAACATGCTTTTTGGGACAATTCCGAAACAGCTAGGTTCACTGAGGAACCTTAGGGTCTTGGATTTGGGTGTTAATAGGCTTACTGGTCCTATACCTCCTGAGCTGGCTGGATTGAGCAGCGTAAGCGTAATAAACTTTCATTCCAATGGGTTGACTGGGAATATACCTTCAGAGCTGGGCAAGTTACAGAATCTTGTTCAGCTGAGGTTGGACAGAAATAGACTGAAAGGATCAATTCCTGGAAGCAATGGTTCTGATTTTTCTCCTACGGCCAATAGTGGATCCACGGCTCACAATGGGCTATGCCCTTCTCCTCGATTAAATGTTGGAGATTTCTCATACAACTTTCTTGTTGGAAAAATCCCACCGTGCTTGAAGTATCTTCCAAGGTCAAGTTTCCAAGGGAACTGCTTACAGGATGAGTACTCTGTCCGGCAGCGGGCTTTCCAAATTTGTATAAGTGGTTCTCCGGCTGGCCAGCGAGGTGGCGTAAAGGGATTCAAGCATCCCACCTCTGACCATAAACATGAAAGATCACCACAACCAACATGGCTTCTCGTTTTAGAAATTTCAACTGGTATTCTTCTGCTTGTATTTGTGATCACTGGTGCAATTACTGCTTCCAGAAGTTGCAAGCTAAAGCCATCGATAAGAATATCCTCGTGGAACAGATCAAAAAGTTGGAGTGATGAGATAACAGTGCTGATCGATTCCGATATGCTGAAAAGCCTGCCAAAGTTAAGTCGCCAAGAGCTTGAAGTAGCTTGTGAGGATTTTAGCAACATTATTGGTTCATCTCCTGAGACAGTAGTGTACAAAGGAACCATGAAGGATGGACCTGAGGTTTCTGTCATATCATTATGTGCCTTTGAAGGTCATTGGACTAGCCAACATGAACTATTTTACCAAAACAAGGTTATTGACCTGGCAAGGTTGAATCATGAGAACATAGCAAAATTTCTGGGCTATTGCAGAGAAAGTGACCCATTCTCCAGGATGCTAGTGTTTGAATACGCATCAAACGGGACCCTGTTTGAGCACCTACACTATGGAGAAGGAGCTCAGTTATCTTGGCTCAGACGAATGAAAATAGCCATTGGCATCGCGCAGGGTCTAAGATACCTGCATACCGAGTTGCAGCCTCCATTTGCTATCTCTGAGCTGAATTCCAACTCTGTATATGTTACTGAAGATTTTACTCCAAAGCTGGTTGATTTTGAGTGCTGGAAAATGATGTTCACCAAACAAAAACATGAGAAGGCTCCTGGCCGCATCAATAACAAATCCTCTTTCCCTGGCCACTTGGATTCTTCAGAGGACAAACAAGCAGACATCCAAGGCAATACATTTGCTTTTGGAGTGATTTTGCTGGAGATCATCAGTGGACGGCTTCCTTATTGCAAGGACAAAGGCTATTTGATTGACTGGGCCATCAAGTATCTGCAGCAGACAGAGGAGATCGGTAAGCTTGTCGATCCTGAGCTGACCAATGTCAGAACAGAGGATCTCGAGGTGATCTGCAGCGTAGTGAGCCGCTGCATCGACCCTGATCCATCCAAGAGACCATCGATGCAGATCATCACAGGAGTTCTGGAGAACGAGATCGACTTGTCGGCAGCCGCCATCCTGAAGGAATCCTCTCTAGCATGGGCTGAGCTCGCCCTGGCGTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MRHCWGGASSVLRLLLALQCGVVVVVLQCSANALGSDVSALIAFKRAIIEDPRSALADWSDADGNACDWHGVICSSPQGSVISLKLSNSSLKGFIAPELGQLSFLQELYLDRNMLFGTIPKQLGSLRNLRVLDLGVNRLTGPIPPELAGLSSVSVINFHSNGLTGNIPSELGKLQNLVQLRLDRNRLKGSIPGSNGSDFSPTANSGSTAHNGLCPSPRLNVGDFSYNFLVGKIPPCLKYLPRSSFQGNCLQDEYSVRQRAFQICISGSPAGQRGGVKGFKHPTSDHKHERSPQPTWLLVLEISTGILLLVFVITGAITASRSCKLKPSIRISSWNRSKSWSDEITVLIDSDMLKSLPKLSRQELEVACEDFSNIIGSSPETVVYKGTMKDGPEVSVISLCAFEGHWTSQHELFYQNKVIDLARLNHENIAKFLGYCRESDPFSRMLVFEYASNGTLFEHLHYGEGAQLSWLRRMKIAIGIAQGLRYLHTELQPPFAISELNSNSVYVTEDFTPKLVDFECWKMMFTKQKHEKAPGRINNKSSFPGHLDSSEDKQADIQGNTFAFGVILLEIISGRLPYCKDKGYLIDWAIKYLQQTEEIGKLVDPELTNVRTEDLEVICSVVSRCIDPDPSKRPSMQIITGVLENEIDLSAAAILKESSLAWAELALAL</aaseq>

Gene Sequence

<dnaseqindica>1..112#568..706#1174..1245#1325..1468#1567..1716#2398..2505#2570..2640#3218..3466#3539..3744#3815..3947#4057..4214#4341..4562#4788..5033#ATGAGGCATTGTTGGGGCGGTGCTTCCTCCGTCCTCCGGCTCCTCCTCGCGTTGCAGTGCGGGGTGGTGGTGGTGGTGTTGCAGTGCTCGGCGAATGCGTTGGGCAGTGACGGTGAGTGTTGTCGCTTGCGCGGTTGCGCCGTGTATGTGTGTTCTTCCACTGACTTGGTGTTTTTCTTTCCTGTTTTTTTTGGTCGGATTTTAGGGAGTTTTGTTTGAATTCGTGGTGTTTTTTCTAATTATGCACTGCCTGTGAATTCCATTTCTGGGAGACGTTTTACGGGGTTTTTTTTTTTACATTTTTTTACCGAGTTTGAAATGGCTGTTCAGATTTTTGGTTCTGATCTATCTTCTTCGAAATTTCCACCTGTTACTCGGTGGAGGCGATGCAAATTTCGAGATTTATCCGCGAAATTTCGTGCCTAAAACTCGAATTCCACCTCCATTTCTATGGTGCATTTCTGATCTGTGACCAACGGTTTTGCTGTGTCTCGTACACTCTCGTTCTGTTCCTCCATGAGAAATGTGGCGTTCTGCTCACACGCGCTTTGCTACGCCTTGTGCTAGTCTCGGCGCTCATCGCGTTCAAGCGCGCAATCATCGAGGACCCCCGGTCGGCGCTCGCGGACTGGAGCGATGCGGACGGGAACGCCTGCGACTGGCACGGGGTGATCTGCTCCTCGCCGCAGGGCTCCGTGATCTCCCTGTAAGAAACACCCCCCCTTGCACCTGCACTCAGCTAGATCTCACTAATGTTTCACCTACTGCTTTACTAGTTACTACTGTGGTACTTACTAGCCGGTAATATCAAATCCTGTTCAACATTACTGTGTACATAAAGTGGGGAGGGAAAAGAGTTTGTTATGGTGATTTATTAATGTTTACATTAGCAGGTACTACAATTTTGTAGGTGAAGACTTGTTTGATACTATAAGCACTGCCACTAGCTTATCGTTGGAGCTGTACAATGCTGTATATGTTTGACATAGACGCATATTGCATGTGCAAACAGCTGGAAATAATGGAGTATGATGTGCCATTTAGATATGTAGTCAGTAGATTTTGTTTGCAATGAAACGCCAACTAAAACCCGTACTTGCGTGATCAGTCAAAATCCTTCTGGGATGGAATTTCTTCTCATGTGTCATGACTCGATGATTCCGCACCTTGCAGGAAGCTGTCAAACTCGTCGCTGAAGGGATTTATCGCGCCTGAACTTGGACAGCTGAGCTTCTTGCAAGAGCTGTATGTTCTGTTTTATTGTTTTTTCAACTGGTTATGATGAATTAGCTTCAAGGTTTCTGAAGGTCTCCTTTTTGGGCAGGTATTTGGATCGCAACATGCTTTTTGGGACAATTCCGAAACAGCTAGGTTCACTGAGGAACCTTAGGGTCTTGGATTTGGGTGTTAATAGGCTTACTGGTCCTATACCTCCTGAGCTGGCTGGATTGAGCAGCGTAAGCGTAATGTAAGATGCCAATTGATTTGCTTATATATTCAGGGTTTTCCTGTCTCTGGTGCTTCTTTGCTATTGAAACTAAGGTTGCTTTCATTCATCTGCTGTAGAAACTTTCATTCCAATGGGTTGACTGGGAATATACCTTCAGAGCTGGGCAAGTTACAGAATCTTGTTCAGCTGAGGTTGGACAGAAATAGACTGAAAGGATCAATTCCTGGAAGCAATGGTTCTGATTTTTCTCCTACGGCCAATAGTGGGTTGGTGACTTCTCCTAACTCCATTTTTATTTGATGATCAAGACTGTAGATGCATTTTCTATATATATTAAACCATAAAAATGTCACTTAATTCCCTTCAGGTTCCTGTGCTCTTGTATTCTATGTCTATATTTCTGGATATCCATGCCATAGTCAAACCATTTTATTCATGAACTGAACACCGCAGCTATGATATCATGGCGATTGTATTTGTGTGTCCCTCTTAAAAAACATTCGTTCTTACATACTAGTTAATTTGGCAGTAAATTTTGGTGACAGTAAAAAGGATAAGACTAGGTATCAAGTGGTGGTTACTTAAGGCCCCATCGTTTGGCTTTTTCCCTAATAAGCCAAAACGGCTTATTAGGGAATAAAATTAAATTTGTAGGTAAAACTTTTATATGTGTGTTCTTAGTGACTTAAAAGCCAATGCTGAAAAAAAAACTACGTTGAAAATAACTCAAAATCAATCTCAAAATTAAGTTTGAAAATTTAAAATTTGGCTTTTTCTTTGGCTTAATAGGCCATCCGATGGGAGCCTTAGTAACTTTGTGCATGCAGCTTCTTTATTATATTCTCTCTTGATGACATCTGGCAGTGAGCCTGCAAAAAACTTATATTTGACCATGTTTTATTATCTTTTTGTTAATTATCTGAATCGATTTTATTTTACTCCACCAGATCCACGGCTCACAATGGGCTATGCCCTTCTCCTCGATTAAATGTTGGAGATTTCTCATACAACTTTCTTGTTGGAAAAATCCCACCGTGCTTGAAGTATCTTCCAAGGTAGTACCATACAGTGTGTTTGCTACTGCTTTAAGGTCCATCCATTTACATGGCTTGTCTGCAGGTCAAGTTTCCAAGGGAACTGCTTACAGGATGAGTACTCTGTCCGGCAGCGGGCTTTCCAAATTTGTATAAGTATGTATTTTTCCTTCTAGCATTAACAGGATTACGCCCCCCTCCCCCCACCCACCAAAAAAAAAAACATTAACAGGATTACTTCAGCATGCATTAAAGTGATATCCTTCTATTGGAATTTCACGATGTACTTGCAAGTGGTGTTGTGATTGATATCCTACAGGCCTACACTTGCAAAATTTATCCGTGTCATGATAAGCAGAAGTATCCCCTTTTATCTGCATTCAGTATAGCCCTCTACCTTTACAGTTTCACTGCTTTATTTAGCAATCAATAGAAGGCCAAGATAGCCCACTTGATCTTTGCATGGTCAACATGATAAGACAATTGATGTGCTTCATTTTTCCGTCTTTATTTTTTTTAAAAAAAAGTGACAAAACTTAAAGCAAAGAGGCCAATATTGAATTTAAGCTAAACTTTAAGCAATTCCTGATGTGGGGACCTGACGCAAAACACCACACTGAAATTTTGCACACCAATTAAATTGATTGCATTTCTTTACTATTTGAGTATTGTTGGGTAACTAGTCGATAACACCATGTACTGATATTGGCTGAATCCACTCATTTTGTCTTAGGTGGTTCTCCGGCTGGCCAGCGAGGTGGCGTAAAGGGATTCAAGCATCCCACCTCTGACCATAAACATGAAAGATCACCACAACCAACATGGCTTCTCGTTTTAGAAATTTCAACTGGTATTCTTCTGCTTGTATTTGTGATCACTGGTGCAATTACTGCTTCCAGAAGTTGCAAGCTAAAGCCATCGATAAGAATATCCTCGTGGAACAGATCAAAAAGTTGGAGTGATGAGATAACAGTGCTGATCGGTTAGTGCTGTTATCGGTTAATTAATTGATATGATTTGAATAGTGCTGTTAATATCTTAATGCTCTCACCAGATTCCGATATGCTGAAAAGCCTGCCAAAGTTAAGTCGCCAAGAGCTTGAAGTAGCTTGTGAGGATTTTAGCAACATTATTGGTTCATCTCCTGAGACAGTAGTGTACAAAGGAACCATGAAGGATGGACCTGAGGTTTCTGTCATATCATTATGTGCCTTTGAAGGTCATTGGACTAGCCAACATGAACTATTTTACCAAAACAAGGTAAAGCTTAGCAAAATTCTGCTGTGAGAACAGTATGTTGTCCCACAATATTAATGGGTGTAAATTTTAGGTTATTGACCTGGCAAGGTTGAATCATGAGAACATAGCAAAATTTCTGGGCTATTGCAGAGAAAGTGACCCATTCTCCAGGATGCTAGTGTTTGAATACGCATCAAACGGGACCCTGTTTGAGCACCTACACTGTAAGCCAGCCTCTTTATTTTCTGACGATTATGTGATGCTTAGTTATTGCATATTGCATGTGTTATGTGCAGCAGGTTTGCTTATTTGATTTTTATGGGGTTCCTTCAGATGGAGAAGGAGCTCAGTTATCTTGGCTCAGACGAATGAAAATAGCCATTGGCATCGCGCAGGGTCTAAGATACCTGCATACCGAGTTGCAGCCTCCATTTGCTATCTCTGAGCTGAATTCCAACTCTGTATATGTTACTGAAGATTTTACTCCAAAGGTAAGGTGCACGTTATTTTTGGTTCTTCAGAGATAGCCTTTCCTTGTCTGTTCATCCCTATCCTTAGAGTGCAATACTCTCCAACCTGGTGAAACAAACACAACTGTTTTCCATTTTTGTTTTCAGCTGGTTGATTTTGAGTGCTGGAAAATGATGTTCACCAAACAAAAACATGAGAAGGCTCCTGGCCGCATCAATAACAAATCCTCTTTCCCTGGCCACTTGGATTCTTCAGAGGACAAACAAGCAGACATCCAAGGCAATACATTTGCTTTTGGAGTGATTTTGCTGGAGATCATCAGTGGACGGCTTCCTTATTGCAAGGACAAAGGCTATTTGATTGACTGGGTGAGGCATTCTACTCTCTCTATCTCATTGTGACAAAGAAGTAAATATTTTAGAAATTGACTCTGAAGTCTGCTCCAGAGGACCAGAGCCTAGTTCCACCATGAACTTAAAATGACTTAAACAAAACATATAGTTCAGAAAATACAGGAGCATGCAGTTTGGAATATTAGTTGCATTGAACATTTGCACTGCTTATTCTGAATATGCATTCTCTACATTGTTCAGGCCATCAAGTATCTGCAGCAGACAGAGGAGATCGGTAAGCTTGTCGATCCTGAGCTGACCAATGTCAGAACAGAGGATCTCGAGGTGATCTGCAGCGTAGTGAGCCGCTGCATCGACCCTGATCCATCCAAGAGACCATCGATGCAGATCATCACAGGAGTTCTGGAGAACGAGATCGACTTGTCGGCAGCCGCCATCCTGAAGGAATCCTCTCTAGCATGGGCTGAGCTCGCCCTGGCGTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017377

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017377&oldid=66271"