BGIOSGA017392

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Revision as of 04:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017392| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017392, complete gene.| tag = OsI_180...")
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Gene Name

BGIOSGA017392

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017392, complete gene.

LocusTag

OsI_18015

Ensembl Transcript ID

BGIOSGA017392-TA

Ensembl Protein ID

BGIOSGA017392-PA

Length

2842

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34355060..34357901

Sequence Coding Region

34355060..34355416,34355924..34356011,34356857..34356989,34357090..34357240,34357326..34357901

Genome Context

<gbrowseImage1> name=IndicaChromosome04:34355060..34357901 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:34355060..34357901 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTTTCCGCAGCATAGTTCGTGATTTCAGGGACAGTTTCGGGACTCTATCCAAGCGGAGTTTCGAGGTGAAAATTTCAGGCTTTTCGGGCCGTCACCGAGGGAAATCCATTGGACCGTCAAGCGAGCTGGATGACACGCCCGTGGTAGCTCAGCAAAGCAAGTGGGCTGGTCTTCCTCCTGAATTACTTCGCGACGTGATGAAAAGGTTGGAGGAGGATGATAGCAATTGGCCCTCCCGCAAGGATGTTGTTGCCTGCGCTTCAGTTTGTACGACTTGGAGAGACATGTGCAAGGATATTGTCAGGAACCCTGAATTTTGTGGAAAGCTTACATTTCCAGTCTCTCTTAAGCAGCCTGGACCTCGAGATGGAGTAATCCAATGTTTCATAAAAAGGGACAAATCAAAACTAACTTATCATCTCTACCTGTGCCTTAGCTCTGCTGTGCTTGATGAGACTGGAAAGTTCCTACTATCAGCTAAAAGGAGCCGGCGAACGACACACACTGACTACATCATTTCTATGGACTCCAAAAATATCTCCCGATCAAGTAGTGGCTATATTGGGAAGTTGAGGTCAAATTTCCTCGGCACCAAATTCATCATCTATGACACGCAGCCTCCATACAATGCTCGGACACTTTGCTCACAAGAACGGACGAGCCGTCGGTTCTCCTCTAGGAAAGTTTCCCCAAAAGTTCCAACGGGTTGTTATCCCATTGTGCAGAGCCTGGTGGCATTGTGCCTGGCCAACACTAAAGAGCTCCTCCCGAGGTTATTTGAGGAGTCCTTCCGCAGTATGGCAACTTCCTTCTCCAAGTACTCCATCACAGATCATTCGACAGACTTCAGTAGTTCTCGCTTCTCTGAGTTTGGGGGAGGGGCTCTGCAAGGGCAAGAGCAAGAGCAAGATGGCGATGATGTGAACAAGGAGAGGCCTTTGGTTCTCCGGAACAAAGCACCAAGGTGGCATGAACAGCTGCAATGCTGGTGCCTCAACTTCCGTGGCCGTGTGACGGTGGCTTCAGTGAAGAACTTCCAGCTGATAGCTGCTGCACCTCAGCCAGCTTCTGGAGCCGCCTCTGAACCTTCACAGGCAGGGCAGGCTGCACAACAGCAAACCCAACCTTCTCAGCCATCGAGTTCGTCGTCGTCGTCATCATCCAACCATGATACGGTGATCCTGCAATTCGGCAAAGTTGCAAAGGACATGTTCACCATGGATTACCGGTACCCATTGTCGGCCTTCCAGGCTTTTGCTATCTGTTTGACCAGCTTTGACACCAAGCTGGCATGTGAATAA</cdnaseq>

Protein Sequence

<aaseq>MSFRSIVRDFRDSFGTLSKRSFEVKISGFSGRHRGKSIGPSSELDDTPVVAQQSKWAGLPPELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSLKQPGPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMDSKNISRSSSGYIGKLRSNFLGTKFIIYDTQPPYNARTLCSQERTSRRFSSRKVSPKVPTGCYPIVQSLVALCLANTKELLPRLFEESFRSMATSFSKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAAPQPASGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSNHDTVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE</aaseq>

Gene Sequence

<dnaseqindica>1..357#865..952#1798..1930#2031..2181#2267..2842#ATGTCTTTCCGCAGCATAGTTCGTGATTTCAGGGACAGTTTCGGGACTCTATCCAAGCGGAGTTTCGAGGTGAAAATTTCAGGCTTTTCGGGCCGTCACCGAGGGAAATCCATTGGACCGTCAAGCGAGCTGGATGACACGCCCGTGGTAGCTCAGCAAAGCAAGTGGGCTGGTCTTCCTCCTGAATTACTTCGCGACGTGATGAAAAGGTTGGAGGAGGATGATAGCAATTGGCCCTCCCGCAAGGATGTTGTTGCCTGCGCTTCAGTTTGTACGACTTGGAGAGACATGTGCAAGGATATTGTCAGGAACCCTGAATTTTGTGGAAAGCTTACATTTCCAGTCTCTCTTAAGCAGGTAACCACTGAATCCAATAGCAAATAACTACAATACGTAATTCCTATTACAATCATTATTCCCTGAGCGGTGCTGGAGTTCCCATCATGTTCTTTTGTATTTCTCCAACCTTTAATTTCACACCACACTGTTAGTTTACATTGGTTTACACTAGCAGACAGTAGTGCCATTTGGTCCAATGCCACTTCCAGGTTAGCTCTTCTAGATTAAACGAGTGAAAGACAAATATGCGATATACATGTGTGGCCTGCCCCATGGGGCTTGGGCACTGAACGAAATTTGGACCTCGGGGTTTTTACATTTCTTGGGACCTGGCTGAGACTGAATCTTATGCGTAACCTGTTTTCCAATTATCGTACCAATCACTTTCTTGATGAAATAACTCTGCATTGATGAGATGTTATATTCAAGTTTACCCCTTTGGTCTCATCTCTTTATCCTTGTTTTCTTGTTGAGATATGATATTTCCTCTGTCTTTTAACAATGTTTTTCATCTCTTGTGCACAGCCTGGACCTCGAGATGGAGTAATCCAATGTTTCATAAAAAGGGACAAATCAAAACTAACTTATCATCTCTACCTGTGCCTTAGCTCTGGTAAGTTCCTGTAATCTTTTTCCACTTACCCATTATTGCCCTAATCGGCACTATTTTTGATATTATAATAGATATGTTTGTTGGCAGATAAACTAGACAGTACTCATAGGAGTATTTGTTTTGTTACTATTTTAGTCCTTAACTTTGTCAATCCTTATCCTAGCATCCCGTGACTGTCTTTATCTATTCTTGTGTAAAACCTCCTTGTAGAATCAATTTTTGACTTAATGCTTGGCGTAGTAGAATTTTGGTGGTCATTTTCAGTAATTTTGAAAAATCTGTTTTAGTATGAAATTTTAGTCTGTTCAAAAGCGACTGGAAACGAACGTACTATAGTATAAACCGATTCAACTTGCTGTAAGAAAGTGAGCTTGTTGAGTGATTGAAAAGAATATGATTACTCATGCATGCTATAAGCAATATGGTAATTATTGCCCTCGGAACAGTCTTCCATAAACTTTCTTCTCGTCCGTTGATTGCTACCATTTTTGTAAACGACGTATACTAGTCCTATTGTCTCTCTGAAAGCAATGTATCTTGGTAATTGATATGTAGATATTGCAGTTATGCAAACACTCACCTATCATTTAATGCGTAGGGATGCCAGTACTGGTCTTTTGTGGCTCTAATGATGCTGCTTCGGAACCTCCCATATAACATGATTTTTAAGTTAAAGTAAACACGTGATGTGCCGTAGTTCCATGTTTTCTGCTGTATAAAGGACTTCTTCGACACAATTTTAGAGATTACCTACAGCATTTTCAGATAACTCGTTACGATACTCTGAGTAGTATATTGAAGAGAAAACTAGAAATTGCACTAACAATTTTAATTGCATCTTGTAGCTGTGCTTGATGAGACTGGAAAGTTCCTACTATCAGCTAAAAGGAGCCGGCGAACGACACACACTGACTACATCATTTCTATGGACTCCAAAAATATCTCCCGATCAAGTAGTGGCTATATTGGGAAGTTGAGGTAAAGTTCCTTTGCCATCAATCTTCTTGCACCCACATTGTCACATACACGTGGTCACAGATACATGCATAATAATCTGACATACACCATGGTATTGCAGGTCAAATTTCCTCGGCACCAAATTCATCATCTATGACACGCAGCCTCCATACAATGCTCGGACACTTTGCTCACAAGAACGGACGAGCCGTCGGTTCTCCTCTAGGAAAGTTTCCCCAAAAGTTCCAACGGGTTGTTATCCCATTGTGCAGGTGAATTATGAGCTAAATGTGCTTGGAACCCGGGGACCAAGACGGATGCAATGCGCTATGCATTCCATCCCAGCATCAGCAGTAGAGCCTGGTGGCATTGTGCCTGGCCAACACTAAAGAGCTCCTCCCGAGGTTATTTGAGGAGTCCTTCCGCAGTATGGCAACTTCCTTCTCCAAGTACTCCATCACAGATCATTCGACAGACTTCAGTAGTTCTCGCTTCTCTGAGTTTGGGGGAGGGGCTCTGCAAGGGCAAGAGCAAGAGCAAGATGGCGATGATGTGAACAAGGAGAGGCCTTTGGTTCTCCGGAACAAAGCACCAAGGTGGCATGAACAGCTGCAATGCTGGTGCCTCAACTTCCGTGGCCGTGTGACGGTGGCTTCAGTGAAGAACTTCCAGCTGATAGCTGCTGCACCTCAGCCAGCTTCTGGAGCCGCCTCTGAACCTTCACAGGCAGGGCAGGCTGCACAACAGCAAACCCAACCTTCTCAGCCATCGAGTTCGTCGTCGTCGTCATCATCCAACCATGATACGGTGATCCTGCAATTCGGCAAAGTTGCAAAGGACATGTTCACCATGGATTACCGGTACCCATTGTCGGCCTTCCAGGCTTTTGCTATCTGTTTGACCAGCTTTGACACCAAGCTGGCATGTGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017392