Os08g0126700

From RiceWiki
Revision as of 12:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0126700| Description = Zinc finger, CCCH-type domain containing protein| Version = NM_001067434.1 GI:115474604 GeneID:4344566| Length = 351...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0126700

Description

Zinc finger, CCCH-type domain containing protein

Version

NM_001067434.1 GI:115474604 GeneID:4344566

Length

3514 bp

Definition

Oryza sativa Japonica Group Os08g0126700, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1535866..1539379

Sequence Coding Region

1535970..1536973,1537070..1537249,1537345..1537524,1537710..1537789,1537875..1538048
,1538348..1538465,1538570..1538648

Expression

GEO Profiles:Os08g0126700

Genome Context

<gbrowseImage1> name=NC_008401:1535866..1539379 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1535866..1539379 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtgccggagttagtgaagctggcgttcgcgagggtgcagagggtggagccggagcatgtcggcaagatattcggcgtaatgctgctgagggagcccgacgaggacgagttggtgcagctcgcatatggtcccgaggccacgctcctcgccaagatcgaggatactaaagccgcgctcaccgtcatctatgcccgctgctccgccgccgccgcgcacggacctcccggtggcggcggcgtcggcgtcggcggcggcggaggctatcaccagcagccgcagcagctcttctcccgccccccggtacctgcttgcggcggcgttcgccatcactactctcccgccgccgccgccgcggctgcctttggataccaggtccagtcgccgcagtactggccggactcgccgccggcgccaccgactaaggcggcgcagcaggagttcgcgcctcccgggctcgtcgtcgacgcctccgcggagggcccgtacccgctgcgcggcggccaacacgtcctcgacgacaacaactttggcggcgggtactactacccggccggcgaggacgccttccccaatggcgggggtggcggcggggggtcgccggcgagggcgcggcgttcgaacgggctgtccactcgacgtccctgccactacttctccaaaggcatctgcaagaacggccagaactgccactactcgcaccaccaggtgtaccaggacgcgctcgccggcgccgccatcaacggcgacgtgtacaaccaccagccaggcggcgtgacgccgggctcgctcgagacgctggagatggagatcaccgagctgctcaactcgcggcgcgggcagccggtgtccatcgcctcgctgccgacgctctacggcgagaagtacggcaagggactccaagccgacggctacctcaccgagagccagcgccatggcaaggccggatacagcctcaccaggctgctctctcgcctcaacaagatacgggtcatcgaaaggccgcacgggcagcattcggtggttctcgcggaggacgctgccaagtacatggatttcagaggtggcggcggcggtggtggcggcgacacgggctcagttccggcgagctcgcaccagatatacctcaccttcccagccgagagtaccttcgccgaggacgacgtcgccaactacttcgggcagtacgggccggtgcgcgacgtgaggatcccctgccaagagcggcgcatgttcgggttcgtcagcttccagagcccggagacggtgagcaccatcctgatgcggcgcaacccgcatttcatctgcggatcgcgggttctcgtcaagccctacagggagaaatccaaatgcgtcgacaggacgtgcgtggacaacatcaaatcgatggttccctactgtcctccacgcttctttgagtttgatcaagagctctacacagcagagtatgatgcttcgaggttgatgaggaagcagttggcagagaagcgcgagatgctcttggagatggagaggcggcgcgccacagttcggaggcttgaatccatgccgccacagtttgcatacttcgattgcagcattgaggacgccagtcccctccattctctccaggatgattcgaaacaactcgaccttatgaatccatcccttgcatcccctgatccactggagatcgtttcaaacagccaagctcctcctacacaggcaggcaacatttatgatgaccatgagagtaaccagattgaactgctgcctgagagtccattcgccgcatcagcgcctgctggaaacagcatatccacaattatatag</cdnaseq>

Protein Sequence

<aaseq>MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAY GPEATLLAKIEDTKAALTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPP VPACGGVRHHYSPAAAAAAAFGYQVQSPQYWPDSPPAPPTKAAQQEFAPPGLVVDASA EGPYPLRGGQHVLDDNNFGGGYYYPAGEDAFPNGGGGGGGSPARARRSNGLSTRRPCH YFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITELL NSRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRVIE RPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVAN YFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKS KCVDRTCVDNIKSMVPYCPPRFFEFDQELYTAEYDASRLMRKQLAEKREMLLEMERRR ATVRRLESMPPQFAYFDCSIEDASPLHSLQDDSKQLDLMNPSLASPDPLEIVSNSQAP PTQAGNIYDDHESNQIELLPESPFAASAPAGNSISTII</aaseq>

Gene Sequence

<dnaseqindica>105..1108#1205..1384#1480..1659#1845..1924#2010..2183#2483..2600#2705..2783#gttcctcctgtttcaattccattcttccattgcgggcgtctagtgatcgatcgaggtaggctaggtttaggtttcatgtccaccagtggtggtggtgggtggcaatggaggtgccggagttagtgaagctggcgttcgcgagggtgcagagggtggagccggagcatgtcggcaagatattcggcgtaatgctgctgagggagcccgacgaggacgagttggtgcagctcgcatatggtcccgaggccacgctcctcgccaagatcgaggatactaaagccgcgctcaccgtcatctatgcccgctgctccgccgccgccgcgcacggacctcccggtggcggcggcgtcggcgtcggcggcggcggaggctatcaccagcagccgcagcagctcttctcccgccccccggtacctgcttgcggcggcgttcgccatcactactctcccgccgccgccgccgcggctgcctttggataccaggtccagtcgccgcagtactggccggactcgccgccggcgccaccgactaaggcggcgcagcaggagttcgcgcctcccgggctcgtcgtcgacgcctccgcggagggcccgtacccgctgcgcggcggccaacacgtcctcgacgacaacaactttggcggcgggtactactacccggccggcgaggacgccttccccaatggcgggggtggcggcggggggtcgccggcgagggcgcggcgttcgaacgggctgtccactcgacgtccctgccactacttctccaaaggcatctgcaagaacggccagaactgccactactcgcaccaccaggtgtaccaggacgcgctcgccggcgccgccatcaacggcgacgtgtacaaccaccagccaggcggcgtgacgccgggctcgctcgagacgctggagatggagatcaccgagctgctcaactcgcggcgcgggcagccggtgtccatcgcctcgctgccgacgctctacggcgagaagtacggcaagggactccaagccgacggctacctcaccgagagccagcgccatggcaaggccggatacagcctcaccaggctgctctctcgcctcaacaagatacgggtcatcgaaaggtaatgccaaaataatcttccatttcttctctatcaatcttgttgattgtttcttctcaatttgattgattgattgatttactgtctgacgaacaggccgcacgggcagcattcggtggttctcgcggaggacgctgccaagtacatggatttcagaggtggcggcggcggtggtggcggcgacacgggctcagttccggcgagctcgcaccagatatacctcaccttcccagccgagagtaccttcgccgaggacgacgtcgccaactacttcgggtctgcaattcggcatgtataaaccgcaacttgtttgcttctttccaaatcttaaatgacatggccattttcgcttgtttgattgcgtttgacaggcagtacgggccggtgcgcgacgtgaggatcccctgccaagagcggcgcatgttcgggttcgtcagcttccagagcccggagacggtgagcaccatcctgatgcggcgcaacccgcatttcatctgcggatcgcgggttctcgtcaagccctacagggagaaatccaaatgcgtcgacaggtaaccattacccttcttggttcttgccaacagatagttcaattcacagtagagttttcaaattattaaaaatggtgtttcccatggacttgttagtacttctagctgttactacttttttgtgtttgtgacgagcaaattaaattaattaaagtttttataaatattgcaattttcacgtgcaggacgtgcgtggacaacatcaaatcgatggttccctactgtcctccacgcttctttgagtttgatcaagagctctacacaggtataatagcatttgcatgcacacatcatcacaatgggcaccgattaattctcaaccttcatcttgcttcaattttgtgcaacagcagagtatgatgcttcgaggttgatgaggaagcagttggcagagaagcgcgagatgctcttggagatggagaggcggcgcgccacagttcggaggcttgaatccatgccgccacagtttgcatacttcgattgcagcattgaggacgccagtcccctccattctctccaggatggtctgtgtgttgtgtcattcattggtcattgccagaattatacctctagttgttccatttctccctggttgaagtttgtttagtggctcaaggattatctacttgattatagtgataaattaaataatttaagtaatgaacttaatgattaggttaataagtgcagtagaagaacggtgtttcttaccaaaacatattttttgaagcgtggagaaatgttttaatagtatagtgaatactgaatagtgcacggccaaatatcctgatggttttatgcggcgtttttttcctgtgaacagattcgaaacaactcgaccttatgaatccatcccttgcatcccctgatccactggagatcgtttcaaacagccaagctcctcctacacaggcaggcaacatttatgatgaccatgagaggtacaaacatatttgcagccaatttcttgcatatatgttgctacctgacattgagctagttcctctttgttcactggattgcttcatttgatttctaactgcagtaaccagattgaactgctgcctgagagtccattcgccgcatcagcgcctgctggaaacagcatatccacaattatataggaggaaaaaaattacaaagagacttttgggccttgggttcggaattcaggtgcccctttaggcatttgatggtaatttggtccaagagtaacataagtatacacacacaggaggagacaacaaaaagcaacaatatttttgttgtagatagagaaggaaggcagaagaaaatctcactggtcataattaggaggcacatcttttttgaaaaaaaataattaggaggcacataaacacatggtgttcattttatactttagaagaggacagaaacaacagcttacaaaagaatctcacatggtgcagtagctagcttgcaagaggtaaggacagttacaaaagaattacaatggtggaaacttgagatatagatgtgcagtttgactataattaaggaataggggacaatgtgatatgctaattatactgtcctagaataaggcatgttattatttacatatttagtgttatcttcttttttttagggtataatggcctactggcctttacctttacaagggtgaaaaaaaaaagcagaacctttgctgatattcctattgacaagatgagcagagcgtgcccatttgtacttatcatcagtaatggagaaaattgccttcgatgtttatttcctgctttctgtaaatgatttgtcttgttttgattgcattgatattttgcaagagtaacagataaaaactttgagtgcatcattagatcgcattttcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0126700, RefSeq:Os08g0126700

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os08g0126700&oldid=6629"