BGIOSGA017396

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Revision as of 04:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017396| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017396, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017396

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017396, complete gene.

LocusTag

OSJNBA0039K24.21

Ensembl Transcript ID

BGIOSGA017396-TA

Ensembl Protein ID

BGIOSGA017396-PA

Length

5118

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34420288..34425405

Sequence Coding Region

34420288..34420746,34421182..34421313,34422400..34422790,34423886..34423974,34424735..34424812
,34424914..34425405

Genome Context

<gbrowseImage1> name=IndicaChromosome04:34420288..34425405 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:34420288..34425405 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGACATCCGATGAAGATGCTAAGAAGGCGTATGCTGATTTCGAGAAGAAGGTCAAGAGGACGATCTATATTGATCATCTTTCCCCTCAAGTCACGAGCTCAGTAATTAAAGCAGCTCTTGCCCAATGTGCAAATGTTGTCGATGTGGAGTTCATTGTTAATTACACAGTCCCGTATGACATTCCTTCTGCTGCATTGGTGGAATTGGATGACGAAATACAAGCTAAGGCTGCACTAGACTTGATGAATGATTTCCCTTTCATAATTGGCGGGATGCCAAGGCCTGTAAGAGCTATATGTGCAAAGCCCGAGATGTTTCGGGAGCGCCCTCCTCACCCTGGCATCAGGAAAGAGTTCCGGTGGGTAAAACAAGAAGATGGAACAGAGTATCAAGGAATGAAGAAATTGAGGATCCTAGCAAAAAGGCAAGAAGTAGAAAATATGGCACTCATAAAGAATCAATTGGAAGAGGAGAAGGAGCTGGCAAAGCAGCAACAGGAATTACTCGATGGAAATTACAATAAGTACGACATGCTGGAGAATGTCGTACAGAACGGAAACATGAAGAGCCTAGCTCAGCATTATGGACGATGGAGGCGGCGGAGACGAAGGGGAGAGGAGGCGGCGGAGACGAAGGGGAGAGGAGGCGGCGAAGGCCGGAAGTGCCGCCGTGAGGAGGAGGAGGCCTTTGCTGCTAAGTCAAGGAGGATCGATGACCAGGATGACGAAGAAAGGATGAACAATTATACTCCTATGTTGGAGGAAGAGGAGGATGGGTGTAGGGATTCGAGGTGCGCGGAATTGGTGTTCGGTGAGGAGGAGGAGCTGGACCCGGTGCAGATGGAGGAACAATTGCAGCAGGTGAAGTTGGAGTTGCAGGACAAGTACACTGAGGTGGACGAGGAGGAGCAGATTCGCAACTACCGTACATCTTGGGATTCCTCTTTTTCTTCCCGTTATGGTCCCTTCCAATGCACAACGTCTGTGCCCGCCATGCGATATACACATGGGCCTATCGCAAGATATGCTTGCTGTGATAGTACCTTGCAGATCTTCTCCATAGAGGTGGATTCATTTTTGGAGTTGACAGGTCCATCCCGTGCAATTCTGATTGTCGACCCAGTTGAGTTTGACGTTGAACTAAAAATTTCACCCAGTCATGCTTGGGTGGTACAGCAAGCTCTTAAGTTCACATATACGGTGCTTAATGGAGCAGTTGAGGCCACTATCTGCAGAGTCAAAGTTGTTAGAGGATCGTGGACAAAAGAAAACCGAAGACGAATTGTCTGCACAACTTCCAATATAGGCCATGAGGACTTTGTGTTGCTTGATTCCCAGGATGCAGAAACAATGCCTATTGGTTCAGATGATGACGTGATCAAGCTATCAAGGCGTGTTGTTACTGTAGAATTAAGTGGACAACTGACAGTTTGTGTGGCAGCCACGCGGGCTGCTGGTGAAACAAGTACAAGAGATGATCGTGGCGGGATTGCACAAAATGAGGCCCCGTCCACAATGGATGAGGTCCACTTCAGGCCCCAAAAATCAGGGGAAAGCTGTGCTACATGTGAATTAGGCTTCTGTGGGGTGGAAATTACTGTTGCTTGGTCCCTTCTTAATTGCGATAATATTGAATAG</cdnaseq>

Protein Sequence

<aaseq>MVTSDEDAKKAYADFEKKVKRTIYIDHLSPQVTSSVIKAALAQCANVVDVEFIVNYTVPYDIPSAALVELDDEIQAKAALDLMNDFPFIIGGMPRPVRAICAKPEMFRERPPHPGIRKEFRWVKQEDGTEYQGMKKLRILAKRQEVENMALIKNQLEEEKELAKQQQELLDGNYNKYDMLENVVQNGNMKSLAQHYGRWRRRRRRGEEAAETKGRGGGEGRKCRREEEEAFAAKSRRIDDQDDEERMNNYTPMLEEEEDGCRDSRCAELVFGEEEELDPVQMEEQLQQVKLELQDKYTEVDEEEQIRNYRTSWDSSFSSRYGPFQCTTSVPAMRYTHGPIARYACCDSTLQIFSIEVDSFLELTGPSRAILIVDPVEFDVELKISPSHAWVVQQALKFTYTVLNGAVEATICRVKVVRGSWTKENRRRIVCTTSNIGHEDFVLLDSQDAETMPIGSDDDVIKLSRRVVTVELSGQLTVCVAATRAAGETSTRDDRGGIAQNEAPSTMDEVHFRPQKSGESCATCELGFCGVEITVAWSLLNCDNIE</aaseq>

Gene Sequence

<dnaseqindica>1..459#895..1026#2113..2503#3599..3687#4448..4525#4627..5118#ATGGTGACATCCGATGAAGATGCTAAGAAGGCGTATGCTGATTTCGAGAAGAAGGTCAAGAGGACGATCTATATTGATCATCTTTCCCCTCAAGTCACGAGCTCAGTAATTAAAGCAGCTCTTGCCCAATGTGCAAATGTTGTCGATGTGGAGTTCATTGTTAATTACACAGTCCCGTATGACATTCCTTCTGCTGCATTGGTGGAATTGGATGACGAAATACAAGCTAAGGCTGCACTAGACTTGATGAATGATTTCCCTTTCATAATTGGCGGGATGCCAAGGCCTGTAAGAGCTATATGTGCAAAGCCCGAGATGTTTCGGGAGCGCCCTCCTCACCCTGGCATCAGGAAAGAGTTCCGGTGGGTAAAACAAGAAGATGGAACAGAGTATCAAGGAATGAAGAAATTGAGGATCCTAGCAAAAAGGCAAGAAGTAGAAAATATGGCACTCATAAAGGTAAATTAGTGACTCCTTTTTAGATGAACTATTTATTTCACTGCTTCTAAGAATCGCCATCTTATGTTTGTTTTATGCTCAGTACGCCTTAAACAGCATAGTTTCTGCGTAGTGATATGCAGTTATGAATCAGTTGGCAGACCATTGCTCAGGAGAATAGTGGGGTAAGCCACTAATTTTTTCGCCGGGACATTGTAAATTGTAATTTAGAAATGGATAATTGAGTACACATTCTGCATTTAACACGAGTAACTATAACCGTAAGCGCGACTGGAGAACTATTATGCGCTTGCCCAGCGTTGTTAGTCCAAGTATTGTGTTTGTAGCAGGACAGTATTTTGGGATCTTGATGCTATTGCTTACCAGGACCAAGTTGCTGTTGTTTTGATCTTGTAACATGGCATTGATGTGTTTTGTTTGTGTTTTTTCTGCCAGAATCAATTGGAAGAGGAGAAGGAGCTGGCAAAGCAGCAACAGGAATTACTCGATGGAAATTACAATAAGTACGACATGCTGGAGAATGTCGTACAGAACGGAAACATGAAGAGCCTAGCTCAGCATTATGGAGTCAGCCTGGCCGATGAGTTTTGACAATCCAATCCATGAGCTGCTCGCTCACTCATAAGTCCGGTCTAGTTCCCGCCTTCCCGGTGCAGCAACATGCCTAATAACCTTTTTTTTTTCTCTCTCCCTCTCCCTCCCCACCTCTCTCTCTCGGCCTTTAGGGCAGTGATAAATCATGTCAATGTGTGAGATGAAGTAATAATCCAATGACTGGTTTGAGGCACGCATTAGGCGTGATCAAAGGCATATCCTTTGTGTAAAGATAGTTGCCTGCCTGCTATAATTTATCTGGAGGGGCTATTGACAACAGCACTGGTTTCTTCCTTGTGATTCTCTGACGTCCTGCGAGATGGTTACCATAAGTATGTCTTAATTTATATGATGAAGCCTGCTTAATTACCAAGCATTGAACTGTGCTGTCGTATACTAGAAGCTGATGCTTTTCTTGCTTAGTTTCAGAGACTCGTGGATGTATTGATAAGTTATTTCGAGGAGGAGAAGGCGTCTGTTGTAGGCCTGACTGAAGTTAGCTGTAGAGTGTATGGAACTGGAAGTCTTAAAATTTTGGCCTTGTTTACTTCCTTGCCATTCTCAACTATTCGAAATTTTGGTGATACGAAAATTTACTAAGATAACAAACTAAATATGTCATTACCAACACAACCTTGCGAATTATTGATAATTCTAGACCATTCTACTCACAAAACTGCTACCAATATTTGGTCAAGTGTCAAACTAAACACTACTACTACACATCTCCACCTGACCTCTTGAAGTTTCTTTTGTTGAACGAAGTGAACAAGCCAATCCTTTATTTTATATCACGGGAACTGATGTTATATATATATATATATATATATATATATATATATATATATATATACGACTAGAAGAGTAATTTTTTATCCATCTGAAACAATATTAATAGTGGAGTGAAAATGAGAATATTAAAACCTGAGCCTAAGCCGTAATGGGCTGCATTCCGTTCAATTTGTGTTGATGAAGGCCCAGCCGCCCAGGGCAAGGCCCACTGGACATTTGGAACGCCTTAAGAAGTGAAAGAGAAGGAAACTGATCTCATACATTTAGCGATGGAGGCGGCGGAGACGAAGGGGAGAGGAGGCGGCGGAGACGAAGGGGAGAGGAGGCGGCGAAGGCCGGAAGTGCCGCCGTGAGGAGGAGGAGGCCTTTGCTGCTAAGTCAAGGAGGATCGATGACCAGGATGACGAAGAAAGGATGAACAATTATACTCCTATGTTGGAGGAAGAGGAGGATGGGTGTAGGGATTCGAGGTGCGCGGAATTGGTGTTCGGTGAGGAGGAGGAGCTGGACCCGGTGCAGATGGAGGAACAATTGCAGCAGGTGAAGTTGGAGTTGCAGGACAAGTACACTGAGGTGGACGAGGAGGAGCAGATTCGCAACTACCGTACATCTTGGGATTCCTCTTTTTCTTCCCGTTATGGTCCCTTCCAATGCACAAGTACGTACTCTAATTTTATTAGGGCACCCGCAATGTTTATCTATATGCTCTCTACAAGAGATTCATGTCAGCATATTTTCCTACTTGAAAGAGATTAAATGAAGAGAGAGAGCAAAGCTATCTACTAACCTGGAGATAGTTTATAGAGAAAAACGAGGCAATGGATTAGAGAGCTATAGATACCTATGTAGACATACTATTGAGGTGGTTTACTATTAATCTAGTTTATTACTGAGATGTACATGTTTTATAGAGAGCACCTTACTTTACCATTGCGGGTGCTCTTACTGTTAGTATCAATATCTCGTCAGATTAATATTCTTGTTATTGTTATGTGCTGCTGCATGAGATTTGGCAGTAGCTAATTCACTCAATATTCAATATGACTCCTTGGAAACCATAAGCTGCATGTCTATTTGCGTTAAAAGGAGAGTACAATGAATCAATCTACATTCCATTTGTTTGTTATTAAGAAACCAGAACATGTACATCAATGTGCATAGGAGTATAGGAACCATGCATACAAAACATTGTTATGATCACTAATGAAGAGAATAGACTCCAAGCTCTAGTTGGATGAATGTACCTAAGAAAGAAAGGAACAACTAGAATCTATTAAACGCTTTGGAAAAACCTGTATCCAACCAAAGTTCTTCTTAAAATTGAACTCGTTTTTCGAATCAAACCCAATAACAAATATATCAAATTTTTTTGTTGCCGTGCGCATGTGGCATGGGCCATTTTCTCAACTACCATGAGGTCCATGACTCACTATATATTTTTTGGATCCTTTCTGCATTAACATAGTGCGACGCTCTATAAGTATCTCCTCACAAGGTGCGACACGTACTATATAAGTATATCCTCACATGGTACGTTAGTTATGGATATTGGGTGATCAAGATCTTTTTTTATTTGATTAATGTGCGATTTCTAGCTTTCTTTTTTTCATTTTCTAAATTAAATTAATGTTCCTATCTAGGATTGACAGAGGGCTTCTGGAAGAGCCTCTAATTATTATAAGTAAAGATGGATCATAATCAATGTATTCTTATGTCTTCTGATTGCATGCATGCATAACTCTTATGTTTGCAGCGTCTGTGCCCGCCATGCGATATACACATGGGCCTATCGCAAGATATGCTTGCTGTGATAGTACCTTGCAGATCTTCTCCATAGAGGTGGTAAGAATCAAAAAGGGTCTCGAGTGGCCGTTGCATGTCTATGGCTTGGTTGCTGTCAGAGACTCTGTGGATTGTAATCGCAACCTTCTGTTCCACCGCACTAGAGATGATTGTTAAATTCTCACTCAGAAGGTGGAGTACCAACCATTTTAAAATTATCTTAATTATTTGGATTTTTTTTAGTTTTTGTTTGCTCATTTCTAGCTGCAGGTACTGTTATTTTGTACTCCCTCTCAAGTCCTATAAACATTCAAATCACCTTACTACTGTGTACACGATAACACGATTTTATTTTATCATGAATGCAATTCCGCCTCTTAATTTTGCCACGTTCTCTAATATCTACTGTAAACTGGAAACCTTCTTGGCAATTCAATGTTTGAAATATATGGACTGTGGTAGTAGTAAAACTGCTCTTATAAGCATATTTATTTCAACTCAAACATGCAAAAACAACTAATGATATAAAATAACAAATTGGAAAACAAAAAAGAGAAGACTTGCAAATATATAATGATAAAGACATGGGATGGTTGGCCACTGTACTAAACTATTAATTCATAAGACATGCATATGTATGCATAAAATTGTCGCTTCTAGAACCTAGGAGATTTTCGACAGAACTTATATGCACTTCCACTAAAATTTTAGTCCTGTAAAGTAAGCAATTACTATTTCATCAATGTGTATTGGTTTTATCCTTGCATTGCTATTTAATTTTTTTATTATTATTATAATGACGTACGAATGATGATTGCAGGATTCATTTTTGGAGTTGACAGGTCCATCCCGTGCAATTCTGATTGTCGACCCAGTTGAGTTTGACGTTGAACTAAAAGTAAAGGGAAGAAGAGAGTCCGATGATCAAATATTGAGCTTTCAACTCTTCAGACAAAATGGGTTTTTTTATGTTAAACAATCAGTAACGCTGGTTCGTAGATTTCACCCAGTCATGCTTGGGTGGTACAGCAAGCTCTTAAGTTCACATATACGGTGCTTAATGGAGCAGTTGAGGCCACTATCTGCAGAGTCAAAGTTGTTAGAGGATCGTGGACAAAAGAAAACCGAAGACGAATTGTCTGCACAACTTCCAATATAGGCCATGAGGACTTTGTGTTGCTTGATTCCCAGGATGCAGAAACAATGCCTATTGGTTCAGATGATGACGTGATCAAGCTATCAAGGCGTGTTGTTACTGTAGAATTAAGTGGACAACTGACAGTTTGTGTGGCAGCCACGCGGGCTGCTGGTGAAACAAGTACAAGAGATGATCGTGGCGGGATTGCACAAAATGAGGCCCCGTCCACAATGGATGAGGTCCACTTCAGGCCCCAAAAATCAGGGGAAAGCTGTGCTACATGTGAATTAGGCTTCTGTGGGGTGGAAATTACTGTTGCTTGGTCCCTTCTTAATTGCGATAATATTGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017396