BGIOSGA017400

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Revision as of 04:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017400| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017400, complete gene.| tag = OS04G06...")
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Gene Name

BGIOSGA017400

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017400, complete gene.

LocusTag

OS04G0690300

Ensembl Transcript ID

BGIOSGA017400-TA

Ensembl Protein ID

BGIOSGA017400-PA

Length

5020

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34447322..34452341

Sequence Coding Region

34447322..34447397,34447987..34448234,34448551..34448584,34448764..34448900,34449201..34449267
,34449490..34449589,34450231..34450394,34450879..34450925,34451033..34451080
,34451319..34451832,34452331..34452341

Genome Context

<gbrowseImage1> name=IndicaChromosome04:34447322..34452341 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:34447322..34452341 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAACATGACCCGCTCCGACTCCCCCATCTCCCGCCTCATCGTCCTCTCCTTCCTCGATTTCCTCAACTCCGTTGAGTTAGCTCCTGGGGCTGATCCTGAAGCTCTTGAGGTTGCCAGGGAATGTATGGAATCCATTTTCAGTATCAACTCTTCATCTGTTGTTGAAAGGGTACATCCAGGACTTCTACTTGAACTCTTTAGCTCTATGGAAGCTGCTCAACAAGATAGCTCTGCACCCGGCCCGGTATCCAACAAACCTTCTTGCAGTGCGAGCACTTCAACTATCCAAGAAGACCTGACTAAATGTACAACATCAAATAGTGAAGGCCAAAATGAAGATACCTTCGACTTAGATCATTCAGGAGATGAACTGTTTGCAAAATTCTATACTTCGCTTGATGAAATCAATTTCTTTAAAACATCATCTGCTGGAGCTGAAGATCCTGGCCAGCTTTCAAAAGCAACACAATTCTTCGATGATGCATTGCTGGGGATGCGGAAGTCAGGAAGGAAAAGGGCAAGCTTAGGAGACCTTGCAGAATTCTTCAAGTCAAAAGGTAATGAATTCATGAGGTCAAAACAACATCTTAAAGCTGTAGAACTGTACACCTGTGCTATTGCGTTGAGCCGAAATAATGCTATTTACTATTGTAACAGGGCTGCTGCATATACCCTTCTTAATATGTTCAATGAAGCTGTTGAGGATTGCCTGAAGTCAATTGAAATTGACCCTAACTACAGTAAAGCATACAGCCGACTTGGATCTGCTTATTTTGCTTTGGGAAAATACCACGATGCTTTGTACAAGGGATATTTGAAAGCCTCCGAGCTTGATCCTAGTAATGAAAATGTCCGGCAGAATATCGAGGTTACCAAAAAGAAGCTGGCTGAACAGCGAGGTCCACCAGAAGAACAGAATACATACGCACCCCAAAGTCAAGCATCACATGGACAGTTTCCTGGTCAATCAAGCAGTGGTGTTCCATTCACGTTTTTTCCTCCTGGAAATTCTCCAACTCCTGAGTTCTTCGCCAATATCATCAACCGTGTGTCTGATATCAGTCAACAATCATCTGAGCATTCCATAAATATAAATTTGAATGACATTTTTAATCATGCAAATGTCAATGGGAACAGTCAAGGAACACCTCAGACAGAGACTTCAAGTAACCATACCCCACCTCCTTCTTTTCCAACCAATACTGCAGTCCCTCCTCCTTTTTCGTTCACGGGCTCTACTGAAGGAAATCGCCCACAACAAACTTCAAGTGGACATGAAGGGGAGCATGGCCAACCAGGCATGCACAGGGATGCTGGCATCCAAATAAACTTGGCAGGACCAGAGCAGGCTGCAGACGCTATGAGAGCTGTGATGGAGATGCTCGCGCCCCATATGAGCCAACGTGAAGGTGCACCTGGGTCTGCTAGAGGACCAGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MGNMTRSDSPISRLIVLSFLDFLNSVELAPGADPEALEVARECMESIFSINSSSVVERVHPGLLLELFSSMEAAQQDSSAPGPVSNKPSCSASTSTIQEDLTKCTTSNSEGQNEDTFDLDHSGDELFAKFYTSLDEINFFKTSSAGAEDPGQLSKATQFFDDALLGMRKSGRKRASLGDLAEFFKSKGNEFMRSKQHLKAVELYTCAIALSRNNAIYYCNRAAAYTLLNMFNEAVEDCLKSIEIDPNYSKAYSRLGSAYFALGKYHDALYKGYLKASELDPSNENVRQNIEVTKKKLAEQRGPPEEQNTYAPQSQASHGQFPGQSSSGVPFTFFPPGNSPTPEFFANIINRVSDISQQSSEHSININLNDIFNHANVNGNSQGTPQTETSSNHTPPPSFPTNTAVPPPFSFTGSTEGNRPQQTSSGHEGEHGQPGMHRDAGIQINLAGPEQAADAMRAVMEMLAPHMSQREGAPGSARGPG</aaseq>

Gene Sequence

<dnaseqindica>1..76#666..913#1230..1263#1443..1579#1880..1946#2169..2268#2910..3073#3558..3604#3712..3759#3998..4511#5010..5020#ATGGGGAACATGACCCGCTCCGACTCCCCCATCTCCCGCCTCATCGTCCTCTCCTTCCTCGATTTCCTCAACTCCGGTCACTACTCCCGTCTCCCGTCTCCCATCCCCTTTTCTCTTCTCACTAAATCACGCTCGATTTTACTGTTTTCCTGCGAGCGAACTAGTACTAGTATAGTATGGGTTGCTTGCTGCTGCGGATCGATCAACCCAATCGGACTACTTCCCTTGCAACCGCCCACCAACATGCTTCGCTTCGGATCATTATGCTTCGACAAGACTCTACTACTACCAGGGTTCCATCCCATCCCATACGCCTGCCCTAAATCCCATTTCCGCTTTATTGGAGTCGCGTGTATAGGTTGCGGATTACTACTTGCCCTTTTTCTTCTATCTCTAGATGGAGCCATTTCGCACATCGATGCGAAGCACCATTGAATTTGCTAATTACTAACTAGTTAGCTACAGTAGTAGGCTATAATATTTTCGATAATCACCATCCAAATCTAAAGCAGCACAATATGCAAGATTTCCCTCCCACACAAAAAAAAAAAGCACAGTAGAGACAAAATTAATTACCAGCTTAGCTCCCCTTTTTTGGAATCAAAGATGTGCAGTGTTGCAAAGCCATTGGTTCTCCTGACATTGGAATTCTGTTTGCTATGCAGTTGAGTTAGCTCCTGGGGCTGATCCTGAAGCTCTTGAGGTTGCCAGGGAATGTATGGAATCCATTTTCAGTATCAACTCTTCATCTGTTGTTGAAAGGGTACATCCAGGACTTCTACTTGAACTCTTTAGCTCTATGGAAGCTGCTCAACAAGATAGCTCTGCACCCGGCCCGGTATCCAACAAACCTTCTTGCAGTGCGAGCACTTCAACTATCCAAGAAGACCTGACTAAATGTACAACATCAAATGTATGGTCTCCTCTCTCTCTCTCTCTCAATCACCACACACACACATTGTCACACGCTTAATCACCGCCATCCGTCTTATTCCATGCCAAGCTATATATATATATATATATATATATATATATATATATATATATATATATAAAGACAAACATATTGACATAACATCATGCATACGTTTGGAATTACATTATGGCTATAATTTTACATCCTAGTAATGTCATACATCAAGTCTTGTTCACCATGGTTTGTTATATCCTTTAACAACCTTAATAAGAAATATTAGCTTCTCATACTGACTTCTGCCTCTCCTTACCAGAGTGAAGGCCAAAATGAAGATACCTTCGACTTAGGTATGACTATAGCATAAACTGTTGGTTGTCTCTATGATCAGATGTCCAGATAATGCTGGAAATATTAAGCTTGTTTTTGTAAATGGTGTTATTTCCTACTGAGTAATAACAAATGTAGGAAAAATCATTCACTTGAAATCAGTGTTTACTCATGCAACTTGATTTTGCTATTTGATCAGATCATTCAGGAGATGAACTGTTTGCAAAATTCTATACTTCGCTTGATGAAATCAATTTCTTTAAAACATCATCTGCTGGAGCTGAAGATCCTGGCCAGCTTTCAAAAGCAACACAATTCTTCGATGATGCATTGCTGGTATAATATGTGATATTTACTTGTCTAACTCGCGCTCTTTTAAAGCACAATAATGGATCATGATTGTATTGTCCCTACACCCTGTTACCAAGGAAAAGTTATCCCAGATGCCTCCCTTGTTATCTAGGACTGTCCCCTGTTTCATGGAGATTCTCTTAAATGACTAGGGCAACTTGGGTAGTGGCACTACTTGGACGAAGAGATCGGCGACTGTTGGACTGCATGCTACTTTTTTCTTGTTTCGCTTATAGTCTAGTGTTTTTTTAATTATGATATGAGGTACAATGCACCTCTGTTTAGGGGATGCGGAAGTCAGGAAGGAAAAGGGCAAGCTTAGGAGACCTTGCAGAATTCTTCAAGTCAAAAGGTATTTATCCACAACCCTTTGTCTTTTCACTTGTGCATTTTCTTTAGCATAGCATAATTTGTTCATTGGGTAGTGAACCACTTTACACCTTCCTGCTTTTTTTAACTTTAACTAAAAATTCTTACTTGAAAAATCTTCATTTTTTTTCATTTATCAATGTAAAAAGAGCTAATTATTTTGCAGTTCAAGCCTTCTGTAGCTAACTGCATGTCTGTTTATCAGGTAATGAATTCATGAGGTCAAAACAACATCTTAAAGCTGTAGAACTGTACACCTGTGCTATTGCGTTGAGCCGAAATAATGCTATTTACTATTGTAACAGGTATGCACAAATTAATGACATTTATGATGACCTTTTTGGTGAATATGTAGGATGCACTGTGCAGTTGTTGTCTCTTTCAGCATAACTGAGTAACTCTTAGGGATAAGGGTCAGAATTAATGGAACTAAACAAAACTTGGGTTATTTCAACCGTTTTCCTGAGTAGTTCTATGTAACATGGGATCTTGAGATGGCTTAGTGGCTAATAGTGAATCCAGTCTAGAATGCCAGAACCAGTAAGTACAGATATAAAATACTATGTTACCCCAAAATCCTCACATTGCTATTTCTAGTGCTGCTATAAGCTATGATGTGGTTAGTAATCTCAGGATCTGTTATTATTCTTCCCACCGGTACAAACATCTTAAAACAGTGGAAGCCAGCTGCAGCTGGTTACAAATCGTACGTGCCATGGCCCATGGGCCCTTTTTTTTGGGGGAAAGTTGATATATAATTGTCAAGTTCTTACTCTTGTTAACCTAACGTTAACCTAACGTCTTTTACTCTTGTTATGGTAGCGGTGTTAACAATCCTTACTGCCTTACAACTATGCACTTGTTTCTCACAAGAGCATTTATCTGCTTCATACATTGCTTTGATCCAATGTAACATGAAAAATTGAAAAGTACATGTTACTTCCAGGGCTGCTGCATATACCCTTCTTAATATGTTCAATGAAGCTGTTGAGGATTGCCTGAAGTCAATTGAAATTGACCCTAACTACAGTAAAGCATACAGCCGACTTGGATCTGCTTATTTTGCTTTGGGAAAATACCACGATGCTTTGTACAAGGGATATTTGAAAGGTAGGCAATCCATAAGTCTCAGTTAGTTTTGCTGAACCTGTGATACATTCTGCTATACACTGTTTTTACATCTGTTACATTTTTTTTTCTGGGAAAGCTGCTGCTTATTTGAATTGTGGTCTGAAAAGCTGATTTTTTTACATACAACCTTACATATCTACCCTTCAGTTTCTTCTGGTGTATCCTTTTAAGAGATCTTTATGTAATTAATTGCCTTTGTGGTCAAGGTCGCTAGTGCAGCGCAATCCATGCCACATGCTTTCAGCACTGTGTAGACTCTGATTCACATCAAACACATACTTTCAACCTTCATTGCTTCTAATGTCTACTGATTATTATATTCCTCATTTTTCTAGATCAAATTAACTTGTTCTGGATGCCAACTTGTTCTGGTTGCCATTCTGGCATGAATCTACATTTTGCATTTAGTATATCCAGTAAAGTAACGCGTGGGTGCATAATGAACTTGTTTTTCTTCTTGCAGCCTCCGAGCTTGATCCTAGTAATGAAAATGTCCGGCAGAATATCGAGGTATTGTTTTTATGCTCTTATTTTCATTAACTGGATAAAGCTTGTTTCATGCTACTCTCGCTAATGGCTGATGGAATTTTTATCCCTGCTCTATGCCTGAACTTTAGGTTACCAAAAAGAAGCTGGCTGAACAGCGAGGTCCACCAGAAGAACAGGTACTGTAACTGGAAACCACGTGTGCTTTTTACTGGACTTTGAGATATGTCCTACCTCTGGCAAACATACAGTCCATTGTTTTCTTTTTAGAAACTAATTTGTGCATTTAAAACTCCTAATTGGAACTTCGGTTATAGGTATAGAATGCTGATATTGTTTGATTACATGAAATTCATTCTTTTGGGGGATTTCTTTGTCCTTTCAAAATTACCAACTGATCAGTTTTGTTGTGTATAGAATACATACGCACCCCAAAGTCAAGCATCACATGGACAGTTTCCTGGTCAATCAAGCAGTGGTGTTCCATTCACGTTTTTTCCTCCTGGAAATTCTCCAACTCCTGAGTTCTTCGCCAATATCATCAACCGTGTGTCTGATATCAGTCAACAATCATCTGAGCATTCCATAAATATAAATTTGAATGACATTTTTAATCATGCAAATGTCAATGGGAACAGTCAAGGAACACCTCAGACAGAGACTTCAAGTAACCATACCCCACCTCCTTCTTTTCCAACCAATACTGCAGTCCCTCCTCCTTTTTCGTTCACGGGCTCTACTGAAGGAAATCGCCCACAACAAACTTCAAGTGGACATGAAGGGGAGCATGGCCAACCAGGCATGCACAGGGATGCTGGCATCCAAATAAACTTGGCAGGACCAGAGCAGGCTGCAGACGCTATGAGAGCTGTGATGGAGATGCTCGCGCCCCATATGAGCCAACGTGAAGGTGCACCTGGGTCTGCTAGAGGTTTGTTGATAAATCACTTTACTTATAAGTTATAAGCTGTTTCTCTATAGTGAACTTCTCATTTTGACTTAAGAGTATAACATAACAAAGGACAATCTCATCATTTTTTGTCTCTTTTATTTGAAATGAAAGGTTATTATTATTATGCAGTGTTTGTCTCATTCTGAAAATCATTTGAGAAACAATGGTTGTTTCTCTTTAAAATGTCCAAAATAGGTGTGAAAATGGTAAAAGTTTGTAGTACATGGGGGTGTATTTTCCCGGTTTTCCTTGACAAAGTATGCTTCCCTCTTTTATTACCAACGGTAAGTGTTTCCAAAGAAATTAGCTGTGATTCCAATATAGTAAGAGATTGTTAGGAAAGTATAAGACATATCCACAGTACCCCTTTTATTTCCTCTGTTTTATTTGTTTGATTCGAGAGCCATTGCCATGTTTTGGTCGATCAATTGAACGAGTTAAATATCAATCATTATATGCTGTATGTCTTTTGTGCAGGACCAGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017400

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017400&oldid=66294"