BGIOSGA017405

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Revision as of 04:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017405| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017405, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017405

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017405, complete gene.

LocusTag

OSJNBA0089N06.24

Ensembl Transcript ID

BGIOSGA017405-TA

Ensembl Protein ID

BGIOSGA017405-PA

Length

3091

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34495730..34498820

Sequence Coding Region

34495730..34495852,34496141..34496359,34496615..34496815,34497681..34497840,34498251..34498476
,34498673..34498820

Genome Context

<gbrowseImage1> name=IndicaChromosome04:34495730..34498820 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:34495730..34498820 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGGTTGAGAGGAAGACGGCGTGCGTCACCGGCGGCAACGGCTACATCGCATCTGCGCTCATCAAGATATGCTGTTGGAGAAGGGATATGCTGTCAAGACGACGGTCAGAAACCCCGAGTTCAGTTTCACCTCTCAAAGATTCTACTAATTGCTGCGATTTGTATTCAGATGACATGGCGAAGAACTCCCATCTCAAGGACTTGCAGGCACTTGGCCCCTTGAAGGTGTTCCGTGCTGACATCGGCGAAGAAGGCAGCTTGGACGATGCCGTCGCCGGCTGCGACTACGCCTTCCTCGTCGCTGCTCCGATGAACTTCAATTCAGAGAATCCTGAGAAAGATTTGGTTGAAGCCGCCGTCAATGGAACGCTCAACGCGATGAGATCGTGCGCGAAGGCGGGGACGGTGAAGCGCGTGATCATAACATCGTCGGACGCAGCGATCTCCAGAAGGCCGCTGCAAGGCGACGGGCATGTGCTGGACGAGGAATCCTGGTCTGACGTCGACTACCTGAGAACGGAGAAGCCGCTAGCCTGGGCGTACTGTGTCTCCAAGGTGCTTTTGGAGAAGGCAGCATGCAAGTTCGCGGAGGAGAACAACACGAGCCTTGTCACCGTATTCCCGGTGTTCACCTTGGGCGCAGCGCCGGCGCCGGTGGCGAGGACGAGCGTCCCCGGCATCCTCTCCCTGCTATCCGGTGATGAGACGCATCTCGAAGTCCTGAAGCCCCTGCAGTGGGTCACCGGCTCCGTGTCGATCGTTCACGTCGACGACCTCTGCCGCGCCGAGATATTCCTCGCCGAGAAGGAGGAGTCGTCGACGGCGGCGGCGAGGTACATCTGCTGCAGCTTCAACACCACCGTCTTGGCGCTTGCCCGTTTCATGGCCGGAAGGTACCCGCAGTACAACGTCAAAACCGACCGCTTCGACGGGATGCCTGAGAAACCGAGAGTCTGCTGTTCGTCGGAGAAGCTGATCAGGGAAGGGTTCGAGTTCAAGTACACGAATTTGGGCGACATACTTGATGACCTTGTGGAGTACGGCAGGGCCCTGGGAATTCTACCACATTGA</cdnaseq>

Protein Sequence

<aaseq>MSAVERKTACVTGGNGYIASALIKICCWRRDMLSRRRSETPSSVSPLKDSTNCCDLYSDDMAKNSHLKDLQALGPLKVFRADIGEEGSLDDAVAGCDYAFLVAAPMNFNSENPEKDLVEAAVNGTLNAMRSCAKAGTVKRVIITSSDAAISRRPLQGDGHVLDEESWSDVDYLRTEKPLAWAYCVSKVLLEKAACKFAEENNTSLVTVFPVFTLGAAPAPVARTSVPGILSLLSGDETHLEVLKPLQWVTGSVSIVHVDDLCRAEIFLAEKEESSTAAARYICCSFNTTVLALARFMAGRYPQYNVKTDRFDGMPEKPRVCCSSEKLIREGFEFKYTNLGDILDDLVEYGRALGILPH</aaseq>

Gene Sequence

<dnaseqindica>1..123#412..630#886..1086#1952..2111#2522..2747#2944..3091#ATGTCGGCGGTTGAGAGGAAGACGGCGTGCGTCACCGGCGGCAACGGCTACATCGCATCTGCGCTCATCAAGATATGCTGTTGGAGAAGGGATATGCTGTCAAGACGACGGTCAGAAACCCCGGTGAGGTTCTCCTCCTCATTTTTTCACTCTCTAAGTTCATGTTTTTTGCAGTGTTTCTTCCATTCAGTTCAGGTGTGAAATCATAGGCCAGCTAGTACCATATGAGCTTTTTAGCGAGTGTTTTCGCTTAACCAATTAGCAAATGGCAGGCTTAGCCGCACATGAGGACAAAATCTTATCCTTTTCCAACTTCCAACTGATAGTTACATATATACATATCGTGACATATGATGGATCGAATTATTATGAGACTTTATATGATCTCAAAAAGATGGTGTGAATTTTCAGAGTTCAGTTTCACCTCTCAAAGATTCTACTAATTGCTGCGATTTGTATTCAGATGACATGGCGAAGAACTCCCATCTCAAGGACTTGCAGGCACTTGGCCCCTTGAAGGTGTTCCGTGCTGACATCGGCGAAGAAGGCAGCTTGGACGATGCCGTCGCCGGCTGCGACTACGCCTTCCTCGTCGCTGCTCCGATGAACTTCAATTCAGAGAATCCTGAGGTGAAAAGCTTACACCCTTCGTCTTAAAAAAAAAAAAAACTAATCTTACCTACAAACCTGAAAACATGTGTGTCTATCTCAGATTGTATATAGGAATTTATTTTTTTTTACAAGGTAGTACTTGGCACCACTAATTAAGATCCCTATTGACTACGAGATAGCTAGTTTTCGTCCGTTTCCAATCCATGTTCATCCAACTTTGATGTGCTCTACTGCTCTCCATTTCGTTTTTTTTTCCGACGTTGATGGTGGCAGAAAGATTTGGTTGAAGCCGCCGTCAATGGAACGCTCAACGCGATGAGATCGTGCGCGAAGGCGGGGACGGTGAAGCGCGTGATCATAACATCGTCGGACGCAGCGATCTCCAGAAGGCCGCTGCAAGGCGACGGGCATGTGCTGGACGAGGAATCCTGGTCTGACGTCGACTACCTGAGAACGGAGAAGCCGCTAGCCTGGGTGACGTTCCTCTCTTGACATTTTCACATCTCCATCTTATCCATAAATTTAAGAAAACTTTTACAGTATTATACTGACAGTACAAATAATCGAAAAAAATATTATTTTTTCCTCCTGCTTCAATATAATATAGTATAAAATTAAAGGGGATAAAATTGTCTTTTTATACTATTGGTGGAGGGTAATTCTGTAAACTCATAATTTATAGCGAAATACTCCCACCGTCTAAAAAAACCATATGTCACATTCTAGCACTCCCTCAGTATTTTAATATGTGACGCCGTTAACTTTTTGATCAACGTTTAACCATTCGTTTTATTCAAAATTTTTGTGCAAATACAAAAATATCTATGTCATGCTTAAAGAATATTAGATGATAAATCAAGTCACAATAAAATAAATGATAAATATATTTTTTTAATAAGATGAATGGTCAAATGTTAGTCAAAAAGTCAACCGCGTCATAAATTAAAATACGGAGCGAGTAAGAGGTTGTGTTTTTTTAGGACGGAGGGAGTAGAGATAGGCATTATTTTCACCACCATGAGGTGCCGCGCCGCTGCAAACTAGCACAATGGATGAAAATTATTAAAATACCATTTTTAATTTAATAAAAATTCTTAAAATACTCAGTATATTGCATAGAAAAGTTCTCTAAATTTAGGGCCTGTTTAGATTGTAACAAAAAATAAACCTTACCAAGTTTTGGCAATGTTAAAATTTTGGTAAGATGGTAATATTATCAAAATTTTGGCAGGATTTCTTATATATTGACTAAATTTAGCAATAAACTAAACATAGACTTTTTTTTTATAAGTTTACAAAAAAAATATTGTATGGTTGAAAATGGCGTTTGCGTTTGCAGGCGTACTGTGTCTCCAAGGTGCTTTTGGAGAAGGCAGCATGCAAGTTCGCGGAGGAGAACAACACGAGCCTTGTCACCGTATTCCCGGTGTTCACCTTGGGCGCAGCGCCGGCGCCGGTGGCGAGGACGAGCGTCCCCGGCATCCTCTCCCTGCTATCCGGTGAGCTAGAAGCACCAGCACCAGCAATCAAATCAACAAGCTAGCTCCCACCAAAGTCTCAACACTTGCAGGGGGTGTTTAGATCCCAACTTAAAATTTTACACCCCGTCACATCTAACATTTGAACAGCTATATGAAATATTAAATATAGGCTAGAAAATAACTAATTACAAGATTACGACTAATTTGCGAGACGAATCTGGTGCTACAGTAAACATTCGCTAATGATGAATTAATTAGGCTTAATAAATTCGTCTCGCGGTTTATTAGTGATGCTGTAATTAGTTTTTTATTAATACCCAACACCTCATACGACACCCTATATAATACCTGATGTGACACGCCAAAACTTTACCGTCTATGAATGTAAACACACCTAATTAAGTTGGCTTCTGTTTATTACTTCTCAGGTGATGAGACGCATCTCGAAGTCCTGAAGCCCCTGCAGTGGGTCACCGGCTCCGTGTCGATCGTTCACGTCGACGACCTCTGCCGCGCCGAGATATTCCTCGCCGAGAAGGAGGAGTCGTCGACGGCGGCGGCGAGGTACATCTGCTGCAGCTTCAACACCACCGTCTTGGCGCTTGCCCGTTTCATGGCCGGAAGGTACCCGCAGTACAACGTCAAAACCGACCGGTACGATCGAATTGTTGGCCAACTTTGAAATCCACATACATACTCTCTCCGTTCTAAAAAGACAACCTAAAACATTTCAACAGAAATGTGACCTCTTCTAACACAACAAATTTAGACAGAGATTTCTTTTAGGTTTTTTTTTAGTAAGAGAATACATGCTATGTTCGAGCGAGTGATCGTCTCTGTATCTTTGCAGCTTCGACGGGATGCCTGAGAAACCGAGAGTCTGCTGTTCGTCGGAGAAGCTGATCAGGGAAGGGTTCGAGTTCAAGTACACGAATTTGGGCGACATACTTGATGACCTTGTGGAGTACGGCAGGGCCCTGGGAATTCTACCACATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017405