BGIOSGA017413

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Revision as of 04:44, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017413| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017413, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA017413

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017413, complete gene.

LocusTag

OSJNBB0020J19.7

Ensembl Transcript ID

BGIOSGA017413-TA

Ensembl Protein ID

BGIOSGA017413-PA

Length

2939

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34581588..34584526

Sequence Coding Region

34581588..34581791,34581911..34584526

Genome Context

<gbrowseImage1> name=IndicaChromosome04:34581588..34584526 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:34581588..34584526 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGTGGGCGTGGAGATATTGGACGCGTCGGAGCTTGCGCCCAAGGACGGCGCCGGCGCCTGCAACGCGTTCGTAGAGGTGGAGTTCGACGGGCAGAAGCAGCGCACCCCGACCAAGCCCGCCGATCGTTCCCCGCAATGGAACCACACCCTCGTGTTCGACGTCCGCGACCCCTCCCGCCGGCCCTCCCTCCCCGTCGACCACCAGCCTCCCCAGTCCGTCTCCGCCGAGCAACCCGACAGCAGGCCTCCTCCCGCCTTTCCCCATGGAGAGGCGCAGGCGCAGGCGCAGCCACCGCCCCCGGAGTCGGAGTCCAAGGGCAAGACCACCCACGACCACGAGCCTCCTCGTGTGTTCCGCTCCGTCCCCGTCCAAGCCCCCGCCCCCGCCGCCTCTCAACCCAGGCGTGCCACGCTCCACGCGGTGGCCGCGCCGCCACCGCCGCCAGGCCAGACCGTGGTCATGCCGCGCCCTCCCGGCCCCGCCCCCGGGCCGCCCCCCTCGGCGTTCGGCCTGGTGGAGACCAAGCCGCCGCTGCCGGCCAAGATGGGCCCACGCGCCGCGGTGGCCGCCGCGGCCAAGATCGCCTCCACCTACGACATGGTGGAGCCCATGTCGTACCTGTACGTGAGCGTGGTCAAGGCGCGCGACCTCCCCACCATGGACATCACCGGCGCGCTCGACCCCTACGTCGAGGTCAGGCTCGGCAACTTCAAGGGCGTCACCCGCCACCTCGAGAAGAACCCCAACCCGGTGTGGCGCCAGGTCTTCGCCTTCTCCCGCGATCACCTGCAGTCCAGCCAGCTTGAGGTGGTCGTCAAGGACAAGGACGTCCTCAAGGACGACTTCGTCGGCCGCGTCGTCTTCGACATGACCGACATCCCCAACCGCGTCCCGCCCGACAGCCCCCTCGCCCCGCAGTGGTACCGCCTCGCCGACCGCTCCGGCGAGAAGATTCGCCACGGCGAGATCATGCTCGCCGTCTGGAACGGCACGCAGGCCGACGAGGCGTTCCCGGAGGCCTGGCACTCGGACGCCCACTCCGTCTCCCTCGACAGCCTCGCCAGCACGCGCTCCAAGGTGTACTACTCCCCCAAGCTCATCTACCTCAAGGTGGTGGCCATCGCGGCGCAAGACCTCATCCCCGCCGAGAAGGGCCGCCCGCTGGCACCGTCCATCGTCAAGATACAGCTGGGCGGGCAGACGCGGCGGACGCGGTCGCAGGGGTCGGCCAACCCGATGTGGAACGAGGAGTTCCTGTTCGTGGCCGCGGAGCCGTTCGACGAGCCGCTGGTGGTGACGGTGGAGGAGCGCGTGGCGGCGGGGCGGGACGAGCCGGTGGGGCGCGTGATCATCCCGGTGGCGGCGCCCTACGTGCCTCGCAACGACCTGGCCAAGTCGATCGAGGCCAAGTGGTTCAGCCTGTCGCGGGCGCTGACGGCGGACGAGGCCGCGGCGGCGGAGGCGACGAAGCTCAAGTCGTCGTTCGCGAGCAAGATCCACCTGCGGCTGAGCCTGGAGACGGCGTACCACGTGCTGGACGAGTCGACGCACTACAGCAGCGACCTGCAGCCGGCAGCGAAGAAGCTGAGGAAGAGCCCGATCGGGATCCTGGAGCTGGGCATCCTCGGGGCGCGGAACCTGGCGGGCGGGAAGAGCCCCTACTGCGTGGCCAAGTACGGGGCGAAGTGGGTGCGGACGCGGACGCTGGTGGGGACGGCGGCGCCCCGGTGGAACGAGCAGTACACGTGGGAGGTGTTCGACCTGTGCACGGTGGTGACGGTGGCGGTGTTCGACAACTGCCACCTGACGGGGGGCGGGGACGCCAAGGACCAGCGGATCGGCAAGGTGCGGGTGCGGCTGTCGACGCTGGAGACGGAGCGCGTGTACACCCACTTCTACCCGCTGATGACGCTGACGCCGGGGGGCCTGAAGAAGACCGGGGAGCTCCACCTGGCGGTGCGGTTCACGTGCACGGCGTGGGCCAACATGCTGGCCATGTACGGGAAGCCGCTGCTGCCCAAGATGCACTACACCCACCCCATCTCGGTGCTGCAGATGGACTACCTGCGGTTCCAGGCGATGCAGATGGTGGCGGCGCGGCTGGGTCGCGCGGAGCCCCCGCTGCACCGTGAGGTGGTGGAGTACATGCTGGACGTGGACTCCCACATGTTCAGCCTGCGTCGGAGCAAGGCCAACTTCAAGCGGATGACGTCGCTCTTCTCCGGGGCGGTGGCGGTGGCGCGGTGGATGGATGGGATCTGCAAGTGGAAGAACCCGGTGACCACCATCCTGGTGCACGTGCTGTTCCTCATCCTGGTGTGCTACCCGGAGCTGATCCTCCCCACCGTCTTCCTCTACCTGTTCGTCATCGGGGTGTGGAACTACCGGAGGCGGCCGCGGAAGCCGGCGCACATGGACACGGCGCTGTCGCACGCGGAGGCGGAGCAGGTGCACCCGGACGAGCTGGACGAGGAGTTCGACACGTTCCCCACCAGCAAGCCCGGGGACGTGGTGCGGATGAGGTACGACCGGCTGCGGAGCGTGGCCGGGAGGGTGCAGACGGTGGTGGGTGACCTGGCCACGCAGGGGGAGCGCGCCCAGGCGCTGCTCAGCTGGCGCGACCCCCGTGCCACCTCCATCTTCGTCCTGCTCTCGCTCATCATCGCGGTGGTGCTCTACGTCACGCCGTTCCAGGTGGTGGCGGTGGTGGTGGGGCTGTACCTCCTCCGCCATCCGCGCTTCCGCAGCAAGCAGCCGTCCGTCCCCTTCAACTTCTACAAGCGACTACCCGCCAAGTCCGACGTCCTCCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MKVGVEILDASELAPKDGAGACNAFVEVEFDGQKQRTPTKPADRSPQWNHTLVFDVRDPSRRPSLPVDHQPPQSVSAEQPDSRPPPAFPHGEAQAQAQPPPPESESKGKTTHDHEPPRVFRSVPVQAPAPAASQPRRATLHAVAAPPPPPGQTVVMPRPPGPAPGPPPSAFGLVETKPPLPAKMGPRAAVAAAAKIASTYDMVEPMSYLYVSVVKARDLPTMDITGALDPYVEVRLGNFKGVTRHLEKNPNPVWRQVFAFSRDHLQSSQLEVVVKDKDVLKDDFVGRVVFDMTDIPNRVPPDSPLAPQWYRLADRSGEKIRHGEIMLAVWNGTQADEAFPEAWHSDAHSVSLDSLASTRSKVYYSPKLIYLKVVAIAAQDLIPAEKGRPLAPSIVKIQLGGQTRRTRSQGSANPMWNEEFLFVAAEPFDEPLVVTVEERVAAGRDEPVGRVIIPVAAPYVPRNDLAKSIEAKWFSLSRALTADEAAAAEATKLKSSFASKIHLRLSLETAYHVLDESTHYSSDLQPAAKKLRKSPIGILELGILGARNLAGGKSPYCVAKYGAKWVRTRTLVGTAAPRWNEQYTWEVFDLCTVVTVAVFDNCHLTGGGDAKDQRIGKVRVRLSTLETERVYTHFYPLMTLTPGGLKKTGELHLAVRFTCTAWANMLAMYGKPLLPKMHYTHPISVLQMDYLRFQAMQMVAARLGRAEPPLHREVVEYMLDVDSHMFSLRRSKANFKRMTSLFSGAVAVARWMDGICKWKNPVTTILVHVLFLILVCYPELILPTVFLYLFVIGVWNYRRRPRKPAHMDTALSHAEAEQVHPDELDEEFDTFPTSKPGDVVRMRYDRLRSVAGRVQTVVGDLATQGERAQALLSWRDPRATSIFVLLSLIIAVVLYVTPFQVVAVVVGLYLLRHPRFRSKQPSVPFNFYKRLPAKSDVLL</aaseq>

Gene Sequence

<dnaseqindica>1..204#324..2939#ATGAAGGTGGGCGTGGAGATATTGGACGCGTCGGAGCTTGCGCCCAAGGACGGCGCCGGCGCCTGCAACGCGTTCGTAGAGGTGGAGTTCGACGGGCAGAAGCAGCGCACCCCGACCAAGCCCGCCGATCGTTCCCCGCAATGGAACCACACCCTCGTGTTCGACGTCCGCGACCCCTCCCGCCGGCCCTCCCTCCCCGTCGACGTCTCCGTCCACCACGATCGCAGCCTCACCGACCACCACGCCACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCTGCTGTCCACCACCACCAGCACCAGCCTCCCCAGTCCGTCTCCGCCGAGCAACCCGACAGCAGGCCTCCTCCCGCCTTTCCCCATGGAGAGGCGCAGGCGCAGGCGCAGCCACCGCCCCCGGAGTCGGAGTCCAAGGGCAAGACCACCCACGACCACGAGCCTCCTCGTGTGTTCCGCTCCGTCCCCGTCCAAGCCCCCGCCCCCGCCGCCTCTCAACCCAGGCGTGCCACGCTCCACGCGGTGGCCGCGCCGCCACCGCCGCCAGGCCAGACCGTGGTCATGCCGCGCCCTCCCGGCCCCGCCCCCGGGCCGCCCCCCTCGGCGTTCGGCCTGGTGGAGACCAAGCCGCCGCTGCCGGCCAAGATGGGCCCACGCGCCGCGGTGGCCGCCGCGGCCAAGATCGCCTCCACCTACGACATGGTGGAGCCCATGTCGTACCTGTACGTGAGCGTGGTCAAGGCGCGCGACCTCCCCACCATGGACATCACCGGCGCGCTCGACCCCTACGTCGAGGTCAGGCTCGGCAACTTCAAGGGCGTCACCCGCCACCTCGAGAAGAACCCCAACCCGGTGTGGCGCCAGGTCTTCGCCTTCTCCCGCGATCACCTGCAGTCCAGCCAGCTTGAGGTGGTCGTCAAGGACAAGGACGTCCTCAAGGACGACTTCGTCGGCCGCGTCGTCTTCGACATGACCGACATCCCCAACCGCGTCCCGCCCGACAGCCCCCTCGCCCCGCAGTGGTACCGCCTCGCCGACCGCTCCGGCGAGAAGATTCGCCACGGCGAGATCATGCTCGCCGTCTGGAACGGCACGCAGGCCGACGAGGCGTTCCCGGAGGCCTGGCACTCGGACGCCCACTCCGTCTCCCTCGACAGCCTCGCCAGCACGCGCTCCAAGGTGTACTACTCCCCCAAGCTCATCTACCTCAAGGTGGTGGCCATCGCGGCGCAAGACCTCATCCCCGCCGAGAAGGGCCGCCCGCTGGCACCGTCCATCGTCAAGATACAGCTGGGCGGGCAGACGCGGCGGACGCGGTCGCAGGGGTCGGCCAACCCGATGTGGAACGAGGAGTTCCTGTTCGTGGCCGCGGAGCCGTTCGACGAGCCGCTGGTGGTGACGGTGGAGGAGCGCGTGGCGGCGGGGCGGGACGAGCCGGTGGGGCGCGTGATCATCCCGGTGGCGGCGCCCTACGTGCCTCGCAACGACCTGGCCAAGTCGATCGAGGCCAAGTGGTTCAGCCTGTCGCGGGCGCTGACGGCGGACGAGGCCGCGGCGGCGGAGGCGACGAAGCTCAAGTCGTCGTTCGCGAGCAAGATCCACCTGCGGCTGAGCCTGGAGACGGCGTACCACGTGCTGGACGAGTCGACGCACTACAGCAGCGACCTGCAGCCGGCAGCGAAGAAGCTGAGGAAGAGCCCGATCGGGATCCTGGAGCTGGGCATCCTCGGGGCGCGGAACCTGGCGGGCGGGAAGAGCCCCTACTGCGTGGCCAAGTACGGGGCGAAGTGGGTGCGGACGCGGACGCTGGTGGGGACGGCGGCGCCCCGGTGGAACGAGCAGTACACGTGGGAGGTGTTCGACCTGTGCACGGTGGTGACGGTGGCGGTGTTCGACAACTGCCACCTGACGGGGGGCGGGGACGCCAAGGACCAGCGGATCGGCAAGGTGCGGGTGCGGCTGTCGACGCTGGAGACGGAGCGCGTGTACACCCACTTCTACCCGCTGATGACGCTGACGCCGGGGGGCCTGAAGAAGACCGGGGAGCTCCACCTGGCGGTGCGGTTCACGTGCACGGCGTGGGCCAACATGCTGGCCATGTACGGGAAGCCGCTGCTGCCCAAGATGCACTACACCCACCCCATCTCGGTGCTGCAGATGGACTACCTGCGGTTCCAGGCGATGCAGATGGTGGCGGCGCGGCTGGGTCGCGCGGAGCCCCCGCTGCACCGTGAGGTGGTGGAGTACATGCTGGACGTGGACTCCCACATGTTCAGCCTGCGTCGGAGCAAGGCCAACTTCAAGCGGATGACGTCGCTCTTCTCCGGGGCGGTGGCGGTGGCGCGGTGGATGGATGGGATCTGCAAGTGGAAGAACCCGGTGACCACCATCCTGGTGCACGTGCTGTTCCTCATCCTGGTGTGCTACCCGGAGCTGATCCTCCCCACCGTCTTCCTCTACCTGTTCGTCATCGGGGTGTGGAACTACCGGAGGCGGCCGCGGAAGCCGGCGCACATGGACACGGCGCTGTCGCACGCGGAGGCGGAGCAGGTGCACCCGGACGAGCTGGACGAGGAGTTCGACACGTTCCCCACCAGCAAGCCCGGGGACGTGGTGCGGATGAGGTACGACCGGCTGCGGAGCGTGGCCGGGAGGGTGCAGACGGTGGTGGGTGACCTGGCCACGCAGGGGGAGCGCGCCCAGGCGCTGCTCAGCTGGCGCGACCCCCGTGCCACCTCCATCTTCGTCCTGCTCTCGCTCATCATCGCGGTGGTGCTCTACGTCACGCCGTTCCAGGTGGTGGCGGTGGTGGTGGGGCTGTACCTCCTCCGCCATCCGCGCTTCCGCAGCAAGCAGCCGTCCGTCCCCTTCAACTTCTACAAGCGACTACCCGCCAAGTCCGACGTCCTCCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017413