BGIOSGA017423

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Revision as of 04:45, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017423| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017423, complete gene.| tag = OsI_180...")
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Gene Name

BGIOSGA017423

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017423, complete gene.

LocusTag

OsI_18067

Ensembl Transcript ID

BGIOSGA017423-TA

Ensembl Protein ID

BGIOSGA017423-PA

Length

4027

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34691628..34695654

Sequence Coding Region

34691628..34691759,34692180..34692224,34692302..34692936,34693428..34693575,34693705..34693884
,34694252..34694320,34695327..34695416,34695529..34695654

Genome Context

<gbrowseImage1> name=IndicaChromosome04:34691628..34695654 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:34691628..34695654 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGCGCCGTCCTTGTCCACCGCCGTCTCCTCTCTTCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTTGTGCATTATGAAAATAATCGTCCGTTTGCTGTTGTTGAGGAATTTGTGCGCAAGGTGGAGATTTCTCATTGGGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCACAAAGGAGTCTTTTCAAGGCTTGAGTATCAATCCAGGCCTTCTATAAGTGGAGTGTCATCATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGAGATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGTCAGAACTTGAAATTGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCATTGGCTATGGTTTGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATACGGTGGTAGATGATCTTACCATCAAAGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGACGGAACAATATCTTGAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTTCCAGGTGTATTACGAATTCAATCCGATCTTCATGCTCGCAGAACCGTTGATGCTGATATCAGCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAG</cdnaseq>

Protein Sequence

<aaseq>MMAPSLSTAVSSLLLLLLLAAAISVSSSPPMPEDSIRVISAEKRIDLTSPIVKVFLTLKLENDATAPEASQVLLAFTPTEVEHLAIVKATRAEGKRKKKIYVPLSVKASDLAAAPNGARLYSILLSTPLKPAEVTTLEVFYALTHSLEPFPAEITQSDPQLVYYRDSAVLLSPYHVLEQVTYIKMPSNRVESFTRVDPTSRAGNEVKYGAYNNQLPNSYVPILVHYENNRPFAVVEEFVRKVEISHWGNVQITEQYKLKHGGAQHKGVFSRLEYQSRPSISGVSSFKNLLARLPPRVHSVYYRDEIGNISSSHLRSDSHKSELEIEPRYPLFGGWHCTFTIGYGLPLQDFLFESDDGRRYINLTFGCPLLDTVVDDLTIKVVLPEGSTSPQAVVPFLTEQYLETSYSYLDVVGRTTVVLKKRNVVGEHNVPFQVYYEFNPIFMLAEPLMLISAVFLFFVACIAYLHMDLSIGKS</aaseq>

Gene Sequence

<dnaseqindica>1..132#553..597#675..1309#1801..1948#2078..2257#2625..2693#3700..3789#3902..4027#ATGATGGCGCCGTCCTTGTCCACCGCCGTCTCCTCTCTTCTCCTCCTCCTCCTCCTAGCCGCTGCTATCTCCGTCTCCTCCTCACCGCCGATGCCGGAGGACAGCATCCGGGTCATCTCCGCCGAGAAAAGGGTTCGTCAGTCCGATCTCTCTCGTGTGATGTCTAATTTTCATCCACCCGCTGCACTTGCACCTTGATTGTTTGAGGACCACAACTTCAAAACTATAGCGGCTGAAAGCTCCTCTGTGACTATTAATCCAAATCACTCCCCTTCTTTAATTTATCGACCGGTGTGTATGCATGCGTGGATCTATAATTTATTTGTAATTTGTTGCACTGTATTAGGATTTGGCTCTTGTTTAATTTTCTTTTATCATGGTCTAGTTAGTCCTTGCCTGATTCACCTTGTTCGCCAGGCACTCCGCACCTTTATCAAATGGGAATATATACACTGTTATATACCTATGCTGCTTTGTACTACCACTTCATTTTTTTTTCCTTTTGATTGGTGAAGCACAGCAATACACTTACTCAAATGCAAACTCCTGCAGATCGACCTCACCAGCCCCATAGTCAAAGTTTTCCTCACACTAAAGGTAAATTCTGATATCGATTCAACCAATTGCCATGTCAGCAAGGTCTGCATTTCTAGTCACACTTGAACCTCTTCCAGCTCGAGAATGATGCCACTGCCCCTGAAGCATCTCAAGTTCTACTCGCATTCACACCCACAGAGGTTGAACATCTTGCGATTGTCAAGGCGACCAGAGCGGAGGGGAAGCGCAAGAAGAAGATATATGTGCCTCTCTCTGTGAAAGCCTCTGATCTTGCTGCCGCTCCAAATGGTGCTCGCCTGTACTCCATTTTGCTGAGCACTCCATTGAAACCTGCTGAGGTGACGACGCTGGAAGTATTTTATGCTTTGACACACTCTTTGGAGCCCTTCCCAGCAGAGATCACCCAGTCAGATCCCCAGCTGGTTTACTACCGTGACAGTGCTGTGCTTCTATCTCCGTACCATGTTCTGGAGCAGGTTACCTACATCAAAATGCCGAGCAATAGGGTGGAGTCCTTTACAAGGGTGGACCCCACCAGTCGAGCTGGTAATGAAGTGAAATACGGCGCATACAACAACCAGCTTCCAAACTCGTATGTGCCCATACTTGTGCATTATGAAAATAATCGTCCGTTTGCTGTTGTTGAGGAATTTGTGCGCAAGGTGGAGATTTCTCATTGGGGGAATGTCCAAATCACTGAGCAGTATAAGCTGAAACATGGTGGTGCTCAGCACAAAGGAGTCTTTTCAAGGTTAGCTGTGAGCCTGCAAGAATCTTACACCTTGATTTTCATCATATCTAGTATTCTGCTCTTGGAATCCAGCTGCTTGAACTATCTTATTCTAGCACTATCAATGTCTGGTGCAAATCAAATTTCAAAAAATGCGCCAGCAAACCCATGATTCATGACTTAAACCCTGAATCCTTTATTGACATCGACTATCTGTCAACCTTCTTCCAACAATATAGGTCCTCTAGCATCGGATTCAAAATTTTTTAAAAAATATAGCTGAATATTTCTTTACTTCTGTTCTGGTTATGTCACACATGCCATGACGAATTCAAACAGGTGCATGCATCTATTTATATGCTAACAACATGCCTTACAGATATCAGATATGCAATTGAGTAACCTTTTGTTTGAAGATGTATGATATATTAACAAATCAGTCCTTCCGTGTATTGTTTTGGCTAATTTAGTTCATTGCTTTATGGTTACTCATTTGAAACCTTTCTTGCTAGGCTTGAGTATCAATCCAGGCCTTCTATAAGTGGAGTGTCATCATTTAAGAATCTTCTTGCAAGGTTGCCTCCTCGAGTTCATTCAGTATACTATCGTGATGAGATCGGCAACATATCTTCATCCCATTTGCGTAGTGATTCGCACAAGGTACAAGATACTTCTTCATGTGGTGTAATGAATCATATGCTAATGAGTGGAATATAAGATATCATTTTATCTTAATGTAAAAAAAAACTGAGACTAATATTTTGATGTGATTGTTTTTCTTTAATGCAGTCAGAACTTGAAATTGAGCCCAGATATCCATTATTTGGTGGTTGGCACTGCACGTTCACCATTGGCTATGGTTTGCCATTGCAAGATTTTCTCTTTGAATCAGATGATGGTCGACGCTACATAAATCTTACTTTTGGATGCCCTCTGTTGGATACGGTGGTAGATGATCTTACCATCAAAGTAAGAATACAATGTTTTAAATTTTCTGATGAGACATATTTCTCATTTGATTCTAATTGTAGCTTCATTAAAGAAAAGCAATATTAAGTCATGTAGCAGATGGTCATGTCCACGAATGTTGCTAGATTCATACAGAATATGCTCATGAGTGATCTTCAACCTAAATTCAACCAATCATTTTATTTTTGGCCATACTTGATTAGTTATGTTCATTTGTATGTCTCCTATTTCATCTCTTTTACAACAAAGCAAAAATAGATTCTTGAGGAACAGACTGGATTGATGTTTGTTTGGAAGGAAAGATTATAGGATTTCTCGGCATGTTTACAGTCCTACAGCATCATACCTAAACCTTTTAATGTTACAGGTCGTGCTTCCTGAGGGATCGACAAGTCCACAAGCTGTAGTTCCTTTCCTGACGGAACAATATCTTGAGGTAATCCCATATTTTTCTGTATTGGCATTCTTTTGTTCATATATCTGTGTTCTATGTTTTAATGCTAAGCGGCAAGTGTACAACTACAAATTTCATAATGGTTATTATCAATAGATGATTCAGTCTAAGAACATTGGCAAGATTGCATTGTTAATTCAGTGGAATCATCTATCATCTGCTAAGGCCTATGCATGTTAGACTATATAATGCCAGCATTATCACCAGTGGTGAAGCCACCGTGGGGGCTGGGGAGGGCCTGGTGATCAGCCCGTATAATCTGGCCATCAGTTACTAGTGAGATTAACTAACTGATGTTATATGTGGTTGCAAGCCTCAAATTAAAATGATGAAATGACGTGACGTTGAATCATCCATATACTAAATATATTACTGAATTTAAAATAGATGCTATTTATTGATCTAATTTAAAATTGGTGATCATCCATATATTAGTAGACACATACGTCTAAAACCACATCAACAATCATGATTTCCATAATTATAAAAGGAGCGACTAGACATATCATACGCAATTGCGCATATTAATATAAACAAGAGCCGATTGAATATATCTTTCTCTTTTAGCTAATTGCCATGATATGCATGATGCCGATCACACATCCACACTCTACAGCATTGTCCATCGAGCCGCAAGTGAGCTCTCTCATCTTATAGATGGCACCCCGAATCCCTAAATCCTGGCTTCACCCCTGATTATCACTTGAGCCTTCTCCATTATTTATCAATATGGTTGTTTGACTACTAGTAAGTAATTATGTCCACAGCTTTCATGGTTTGGTTTCTGTCGTGATCCGTGGATAGTTCTGTAGGAATGAGTAGGTAACAGGACACCAGTAACTGTTACAAGGAAATTTCACCATAAGCATTTAGTTTGCTCCTTCATAGATGGATTTTCCTATCGTTTCTAGTTTGATATTATCTTGCCCTTTTCGGATTTCAGTTCCCGAAGATTATTGTTTGATAATAATGTATGCTACCAATGCAGACTAGTTATTCATACCTTGATGTTGTTGGAAGGACGACAGTTGTACTAAAGAAGAGAAACGTAGTTGGAGAGCACAATGTTCCTTTCCAGGTACTCTCTGACAGATAGGCCTTGATACATTTTTGAATTTGATTGGTAATTGTCTGAATGTTGCTGTTGTGAGACTCTATCTGATAAGCATGACATCTCGGCTCAACTGCAGGTGTATTACGAATTCAATCCGATCTTCATGCTCGCAGAACCGTTGATGCTGATATCAGCCGTGTTCCTGTTCTTTGTAGCCTGCATTGCTTATCTTCACATGGATCTTTCCATTGGGAAATCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017423