BGIOSGA017424

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Revision as of 04:45, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017424| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017424, complete gene.| tag = OsI_180...")
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Gene Name

BGIOSGA017424

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017424, complete gene.

LocusTag

OsI_18069

Ensembl Transcript ID

BGIOSGA017424-TA

Ensembl Protein ID

BGIOSGA017424-PA

Length

4097

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34697927..34702023

Sequence Coding Region

34697927..34698112,34698194..34698719,34699492..34700483,34700596..34700861,34700961..34701027
,34701119..34701169,34701778..34701871,34701995..34702023

Genome Context

<gbrowseImage1> name=IndicaChromosome04:34697927..34702023 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:34697927..34702023 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTCGAAATCGAACACGGAGAGGGCGAGGAAGGCGCTGGAGGCCATGAAGCAGCTGGGTTTCTCCAAGAAGGAGGCCACCCCTGTCCTCAAGAACCTCCTCAGGCTCTTCGGCAACAACTGGGAGCCCATCGAGGACGAGTGCTACCGCGCCCTCGCCGACGCCATCCTCGACCGCCACCAGGAGACCGCAGCTGACCGCGGCTGCAGCGCGACAAGGCCAACGCCGGACGATGATCATCACCCCCTTACCCTCTGTGGTGCTTCGCGCGACGTGGATACTGAGACCGACGAACCTCGCACCAAGAAGCCTAGGGCCACCAACTCAGATCCTCAATCGCCTCCATCCCTTACGGACGACCAAGATGTTCCTGCAGCTATCTCACCCCCATCCCATGGTGCTTCTCCTCAATTCCGTCCACAGACCAGGGCCTCTGCACGACTGCGCCAAGCTTCTCCTTCTTCTGTTACAGCAGCACACAAGAGGCCAAGACAGATGATGGATGAAGATTTCCAAGACTCTGCATTCCTCAGGGAACCCAAGCCTGAGCCCGATATCGATATGGACGCCATACAAGGCACTGCTGCTACATCAGACTGCCCAAATGCCCACCTTGGCCTCATTGACTATCCGCTCAATGCCAGCTCCTCAAGGGTTGCACTTCCTCTGGCATTGCTTCCACCTGATCAAAATGTTCCACAGATTTCAGGTCCTAAAAAAAGGGCAATTCAACCTTGTAGCAAGGTGAACACGGGGGAAGGATCTTCAGTCATTGATGTAGCATCATCCACTATGGGTGAGGTCAAAATGTCACTGAAATGCAGTGTTGACCCAAAGTTCCGCATGCCTTCCTTAGAAGCAGTTTTCAAGATGGTGGAGGATAAATATCTTCACTCATACAAGATTCTGCCTCCTGAGTTTTCCATTGGTAGCCTCATGAATGAGATATGCCAATGTGTTGTACAACTGGGTAGTGATCATATTGCAGAACATAATACAGAATCAGATGTTGCTGGCAATGGGAGATGCTCACAAAATGAGCCAATGACAGGTAGCATTCCATTTGTGAAGCCAATAGCATGCGAGGATGGTGGAAATAGGAAATGTAAATCTGCAGGAGAATCATTTATTGTGGAAGACTCAGAAAATTCAAGTGTTGCTAAACAGAAGACTCATTTGGCACTTGCCAACTTGAAGCCTATCCATGATGTAACTGATATATCCAAGGGAGAAGAGAGAGTGAGGATATCGGTGGCCAATGAATTTGCAAGTGAGAAATGTCCTCCTTCCTTTTATTATATACGAGGAAACCTTGTTTTCCAAAATGCTTATGTCAACATCTCCGTTGCAAGAATTGGTGATGAAGATTGTTGTGCTGATTGCTTTGGCAACTGCTTGTCTGCACCTATACCATGTGCTTGCACAAGAGAAACCGGGGGCGAATATGTGTACACACCAGAAGGTCTGGTTAGGACACCATTCCTTGATGAATGTGTTTCTATGAATCGTTTCCCAGAAAAATGTCACAAGTTCTTCTGTAAATCATCCTGCCCACTCGAGAGATCTAGGAATGAAGCTTCACCAGAGCCTTGCAGAGGACATCTTGCTAGGAAATTTATCAAGGAATGCTGGAGTAAATGTGGTTGTAACATGCAATGTGGTAACCGTGTGGTTCAACGTGGCATCACATGCAATCTGCAGGTATTTTTCACAGGAGAAGGGAAGGGTTGGGGTCTTCGCACTCTTGATGAACTGCCAAAAGGAGCCTTTGTTTGTGAATATGTTGGGGAAGTACTAACTAGTACAGAACTGCATGAAAGGACACTTCAAAACATGAACAATGGTAGGCATACCTACCCTGTTCTCTTGGATGCTGATTGGGGTTCTGAAGGTGTGTTGAAAGATGAAGAAGCTTTATCCCTGGATTCAACATTTTATGGGAATGTTGGGAGATTTATCAACCATAGATGCTATGATGCGAATTTAGTTGAGATACCTGTTGAAGTGGAGACGCCTGATCATCATTATTATCATCTTGCATTTTTCACAACCAAGAAGGTGGAGGCATTTGAGGAGCTCACATGGGACTATGGTATTGATTTTGGTGATGGCAAAGATCCTGTTAAAGCATTTCAGTGTCTATGTGGAAGCAGATATTGCCGCGGTATCAGGCATCCGAGGAAACGAGGGAAAGCTGCTGCGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MGSKSNTERARKALEAMKQLGFSKKEATPVLKNLLRLFGNNWEPIEDECYRALADAILDRHQETAADRGCSATRPTPDDDHHPLTLCGASRDVDTETDEPRTKKPRATNSDPQSPPSLTDDQDVPAAISPPSHGASPQFRPQTRASARLRQASPSSVTAAHKRPRQMMDEDFQDSAFLREPKPEPDIDMDAIQGTAATSDCPNAHLGLIDYPLNASSSRVALPLALLPPDQNVPQISGPKKRAIQPCSKVNTGEGSSVIDVASSTMGEVKMSLKCSVDPKFRMPSLEAVFKMVEDKYLHSYKILPPEFSIGSLMNEICQCVVQLGSDHIAEHNTESDVAGNGRCSQNEPMTGSIPFVKPIACEDGGNRKCKSAGESFIVEDSENSSVAKQKTHLALANLKPIHDVTDISKGEERVRISVANEFASEKCPPSFYYIRGNLVFQNAYVNISVARIGDEDCCADCFGNCLSAPIPCACTRETGGEYVYTPEGLVRTPFLDECVSMNRFPEKCHKFFCKSSCPLERSRNEASPEPCRGHLARKFIKECWSKCGCNMQCGNRVVQRGITCNLQVFFTGEGKGWGLRTLDELPKGAFVCEYVGEVLTSTELHERTLQNMNNGRHTYPVLLDADWGSEGVLKDEEALSLDSTFYGNVGRFINHRCYDANLVEIPVEVETPDHHYYHLAFFTTKKVEAFEELTWDYGIDFGDGKDPVKAFQCLCGSRYCRGIRHPRKRGKAAAK</aaseq>

Gene Sequence

<dnaseqindica>1..186#268..793#1566..2557#2670..2935#3035..3101#3193..3243#3852..3945#4069..4097#ATGGGTTCGAAATCGAACACGGAGAGGGCGAGGAAGGCGCTGGAGGCCATGAAGCAGCTGGGTTTCTCCAAGAAGGAGGCCACCCCTGTCCTCAAGAACCTCCTCAGGCTCTTCGGCAACAACTGGGAGCCCATCGAGGACGAGTGCTACCGCGCCCTCGCCGACGCCATCCTCGACCGCCACCAGGTGTCCTTGTCGCCAAAGCCCTCCTCTTTTTTTTTTGGTTTACATTTCGATTCGACTTACTTAGCCGCTGGGGTTCTTCAGGAGACCGCAGCTGACCGCGGCTGCAGCGCGACAAGGCCAACGCCGGACGATGATCATCACCCCCTTACCCTCTGTGGTGCTTCGCGCGACGTGGATACTGAGACCGACGAACCTCGCACCAAGAAGCCTAGGGCCACCAACTCAGATCCTCAATCGCCTCCATCCCTTACGGACGACCAAGATGTTCCTGCAGCTATCTCACCCCCATCCCATGGTGCTTCTCCTCAATTCCGTCCACAGACCAGGGCCTCTGCACGACTGCGCCAAGCTTCTCCTTCTTCTGTTACAGCAGCACACAAGAGGCCAAGACAGATGATGGATGAAGATTTCCAAGACTCTGCATTCCTCAGGGAACCCAAGCCTGAGCCCGATATCGATATGGACGCCATACAAGGCACTGCTGCTACATCAGACTGCCCAAATGCCCACCTTGGCCTCATTGACTATCCGCTCAATGCCAGCTCCTCAAGGGTTGCACTTCCTCTGGCATTGCTTCCACCTGATCAAAATGTTCCACAGATTTCAGGTTCGCCTACAAAATTTTAATTGATTCATCCATTTGTTGTCATGCCGTGGATAATAGGGTACCATAGGTGTTCATCACTTCCATTATTAGATTACGGCATTTTGCTGTTTGCTGGATTGGCATTTTAAAGTAAATAGGAAAATAGGAGTAATTTCATCAACCAGGCAGTTTGTGCAGCTATTAATTATAGGGGTGTTTGGATCCTAGCCTCATTTGCTAAGGCTAGGCTGTGCTCAACTAGCTCTTTTGGGTGAAGGTCAGGTAATCAGCCTCGTTGTTTGGCTCACGCAAGATTGGCAATGATGTTTCCACACAATCTTTCTCTCTGTGTGTGGCAACTGGCAAGGACTTCCTTGTGCACATTGGCTATCATTCCATCCAGAGCGAGGCTTTCTAGCTTTTACCGAACGGCTGGCCTTTGCTTAGCTAGGCTATAACTGTGCTAGCCACCTAGCTGTTTTAAGAAAAAGATGTAGCCTACTATCTTAAGAACACATCTTTTTCATTCAGTTGGTTACTCCTCTAGTCCTCTTAAAGCCCTAGACTAAAATATGCCATATGCCTTTCCATATATTTTCTTTGGCACAATTTAGAATCTTCTAGCCTTCAAAAACTCTGCTGGTAACAGGTTGCAACCTTTGTTTGATATCTTAGCGTGATAATTTTTTAGGGGACGTCTCCAATAGTTTGATCAAACACATCTTTTGGTCATTTTATTGCATTCAGTATGCTTAGTCTGGTTGGACTCATTTAAGCTATGAACTTTATACAGGTCCTAAAAAAAGGGCAATTCAACCTTGTAGCAAGGTGAACACGGGGGAAGGATCTTCAGTCATTGATGTAGCATCATCCACTATGGGTGAGGTCAAAATGTCACTGAAATGCAGTGTTGACCCAAAGTTCCGCATGCCTTCCTTAGAAGCAGTTTTCAAGATGGTGGAGGATAAATATCTTCACTCATACAAGATTCTGCCTCCTGAGTTTTCCATTGGTAGCCTCATGAATGAGATATGCCAATGTGTTGTACAACTGGGTAGTGATCATATTGCAGAACATAATACAGAATCAGATGTTGCTGGCAATGGGAGATGCTCACAAAATGAGCCAATGACAGGTAGCATTCCATTTGTGAAGCCAATAGCATGCGAGGATGGTGGAAATAGGAAATGTAAATCTGCAGGAGAATCATTTATTGTGGAAGACTCAGAAAATTCAAGTGTTGCTAAACAGAAGACTCATTTGGCACTTGCCAACTTGAAGCCTATCCATGATGTAACTGATATATCCAAGGGAGAAGAGAGAGTGAGGATATCGGTGGCCAATGAATTTGCAAGTGAGAAATGTCCTCCTTCCTTTTATTATATACGAGGAAACCTTGTTTTCCAAAATGCTTATGTCAACATCTCCGTTGCAAGAATTGGTGATGAAGATTGTTGTGCTGATTGCTTTGGCAACTGCTTGTCTGCACCTATACCATGTGCTTGCACAAGAGAAACCGGGGGCGAATATGTGTACACACCAGAAGGTCTGGTTAGGACACCATTCCTTGATGAATGTGTTTCTATGAATCGTTTCCCAGAAAAATGTCACAAGTTCTTCTGTAAATCATCCTGCCCACTCGAGAGATCTAGGAATGAAGCTTCACCAGAGCCTTGCAGAGGACATCTTGCTAGGAAATTTATCAAGGAATGCTGGAGTAAATGTGGTTGTAACATGCAATGTGGTAACCGTGTGGTTCAACGTGGCATCACATGCAATCTGCAGGTAATATTTAATGCCTTTGACTTGTATTGGTATTTATGCTATATTTGTCATTGGCAGTGTGCAGATTATACTAATGCCGAATGTTTGAATTACTGTCAATTCGAACGTCCAGGTATTTTTCACAGGAGAAGGGAAGGGTTGGGGTCTTCGCACTCTTGATGAACTGCCAAAAGGAGCCTTTGTTTGTGAATATGTTGGGGAAGTACTAACTAGTACAGAACTGCATGAAAGGACACTTCAAAACATGAACAATGGTAGGCATACCTACCCTGTTCTCTTGGATGCTGATTGGGGTTCTGAAGGTGTGTTGAAAGATGAAGAAGCTTTATCCCTGGATTCAACATTTTATGGGAATGTTGGGAGATTTATCAACCATAGGTGTGCTCTGGTTTTCAAATTAATAACTATGGCCAGCAACAAAGATTTGGCTTATGTGCATTACTTATGTTTTTTCTGTTTGAATACTTCACTACATAGATGCTATGATGCGAATTTAGTTGAGATACCTGTTGAAGTGGAGACGCCTGATCATCATTATTATCATGTAAGTTCTCTTTAGCTACTAAAAAGTATATGCTTTTAAGGCTCCTCAAAAGAGCACATCATAGACTATATATATATTTTGGGTGACACAGCTTGCATTTTTCACAACCAAGAAGGTGGAGGCATTTGAGGAGCTCACATGGGTAAGTCTTGTCTAGTTACTTCTGAATATTACTGCAGCATATACTTTGTGCAAATGTCTGAACATATGTGTTTCTCTAAGAAAGTGTTCCTGCAGATGCTGAATGATTTACGTAGCTTAAGTACTTCGTACTTCTCTAAAAAGATTGAGCTTAAACTGTTTCAATCTCTCCTTACCGTCCTTTGTTTGAGGCTTCTCCAACGTATATCCAGTGGGCAATTCCATTTATTGCATCTCTTCACATGCTTTGATGCGATTCTCAATTCACAACCTATATTATTTACAAATTTATTCTATTTGGTCATGTGCTCTCATTATTACTCAGTTCAGTTATGATGCACGGTGACCAACCTTTTATCGCATCATGTCAGGTTTTTAATAATTGTGTCATTTGTATGTTAACATTGTATAGCAATATCTGCTGGCCACTTCATCCTATTCTCAGCGAAGTAAAATCGTATCAAGTTATAGGTTCCCTTTTCCCCTGTTGCATATTTTTTTTGGGTTACTCCTTTTGTTTATGGGACCAACCTAGAGCTGCAATATATATAACACCTATTAATATCTGTGGAAGATGTTCCCCTTTACATTTAATATTCTTGGTTTCAGGACTATGGTATTGATTTTGGTGATGGCAAAGATCCTGTTAAAGCATTTCAGTGTCTATGTGGAAGCAGATATTGCCGCGGTATCAGGCATCCGAGTATGTTCTCCTTGCTTGGTTTAAAACCATTTACTTTAAAAATTGCATGCCGGATTGTTCTGCATCTAAATTTTGCATATTGATTGAGGAAGTGATTGTTTAGGTACTTATGCTCTTTTGCAGGGAAACGAGGGAAAGCTGCTGCGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017424