Os08g0127900

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Revision as of 12:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0127900| Description = Similar to Globulin 1 (Fragment)| Version = NM_001067442.1 GI:115474620 GeneID:4344574| Length = 2260 bp| Definitio...")
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Gene Name

Os08g0127900

Description

Similar to Globulin 1 (Fragment)

Version

NM_001067442.1 GI:115474620 GeneID:4344574

Length

2260 bp

Definition

Oryza sativa Japonica Group Os08g0127900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1596241..1598500

Sequence Coding Region

1596280..1596954,1597041..1597523,1597902..1598339

Expression

GEO Profiles:Os08g0127900

Genome Context

<gbrowseImage1> name=NC_008401:1596241..1598500 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1596241..1598500 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagacggcatcaatggcggcgtcgctgctcatcccgctctgcctctgcatcctcctcctgcgcggcgcctccgccgtgagcgaccagcaagaagccggccgtcgcgatagctgcgaccgcatcgaccgccgcatccgcgcgctggagccgacgcgccgcgtcgactccgaggccggccacaccgagctctacgacgaccgcgacggccagctcccctgcgccggcgtcgccgccgcgcgcatcaccatccagcgcaacggcctcctcctcccttcctattccaactccccccgcctcgcctacatcgtccacggccgtggcatcgtcggcgtcgtcatccccggctgccccgagacgtaccaggagacctcgtcgtcgtcgtcgcaggagcaggaggacgacgagcgccgccgccgtggccgccgtggtgatgaggagagacggcgatcgagcgagggagaggaggaggaggaagaggagaccagccgccgcagcttcgagcagtccatccgcgacgagcaccagaggatcaccaccgtccgccagggcgacgtcgtggccatccccgccggcgcgccgttctgggtccacaacgacggcgactccccgctcgtcgccatctccgttcacgacgtcagcaacaacgccaaccagctcgaccaaacctccaggcgtttccggctagccggcgggcaggcgaggagcgaggggaggcagaggtacggtgagggcgagtcgtcggagtcggagacggaacgcggcggcgaggagtcgtacaacatcctgagcggcttcgacaccgagctgctcgccgagtcgatgcgcgtcagcccggacatcgcgcgcaagctgcagggccgcagcgacaagcgcggcaacatcgtgcgcgtccgccgcggcggcctccgcatgctccgcccggcgacggagcgggtgaccgacgaggagatgatgaggggcgccaacgccgccgccgccgccgggaacgggatcgacgaggccgtctgcttgatgaagctccgcgagaacgtcgccgacccgatgaaggccgacctctacacccccaatggcggccgcatcaccgtcctcaacagccagaagctccccgtcctcaagctcatcaagatgagcgtcaaccgcggcgtcatgcgccggaacgcgatcctggcgccgcactggaacatcaacgcgcacgcggcggtgtacgcgacgagcgggagcgcgaggctgcaggtggtgagcagcgaggggcggcgggtgttcgacggcgagctccggcgcgggcagatggtggtggtgccgcagagcttcgcggtggcggggcgcgccggcgacgaggggttcgcgtgggtgtcgttccagacgagcgacggcgccatgaacgcgccggtggttggcaagtcgtcggcgctgcgcgggatgccggcggacgtgctggacaacgcgttcggcgtgtcgagggaggaggcgcgcatggtcaagttcgggagggggcaggagctcgccatcttctcccccaagtccggcgccgccgcccgccgccgccgctctcccggccacagggacgacggcgtgctcgccgccccggcctga</cdnaseq>

Protein Sequence

<aaseq>MKTASMAASLLIPLCLCILLLRGASAVSDQQEAGRRDSCDRIDR RIRALEPTRRVDSEAGHTELYDDRDGQLPCAGVAAARITIQRNGLLLPSYSNSPRLAY IVHGRGIVGVVIPGCPETYQETSSSSSQEQEDDERRRRGRRGDEERRRSSEGEEEEEE ETSRRSFEQSIRDEHQRITTVRQGDVVAIPAGAPFWVHNDGDSPLVAISVHDVSNNAN QLDQTSRRFRLAGGQARSEGRQRYGEGESSESETERGGEESYNILSGFDTELLAESMR VSPDIARKLQGRSDKRGNIVRVRRGGLRMLRPATERVTDEEMMRGANAAAAAGNGIDE AVCLMKLRENVADPMKADLYTPNGGRITVLNSQKLPVLKLIKMSVNRGVMRRNAILAP HWNINAHAAVYATSGSARLQVVSSEGRRVFDGELRRGQMVVVPQSFAVAGRAGDEGFA WVSFQTSDGAMNAPVVGKSSALRGMPADVLDNAFGVSREEARMVKFGRGQELAIFSPK SGAAARRRRSPGHRDDGVLAAPA</aaseq>

Gene Sequence

<dnaseqindica>40..714#801..1283#1662..2099#accaccaccaccaccaacactgcaacacaacacaccaccatgaagacggcatcaatggcggcgtcgctgctcatcccgctctgcctctgcatcctcctcctgcgcggcgcctccgccgtgagcgaccagcaagaagccggccgtcgcgatagctgcgaccgcatcgaccgccgcatccgcgcgctggagccgacgcgccgcgtcgactccgaggccggccacaccgagctctacgacgaccgcgacggccagctcccctgcgccggcgtcgccgccgcgcgcatcaccatccagcgcaacggcctcctcctcccttcctattccaactccccccgcctcgcctacatcgtccacggccgtggcatcgtcggcgtcgtcatccccggctgccccgagacgtaccaggagacctcgtcgtcgtcgtcgcaggagcaggaggacgacgagcgccgccgccgtggccgccgtggtgatgaggagagacggcgatcgagcgagggagaggaggaggaggaagaggagaccagccgccgcagcttcgagcagtccatccgcgacgagcaccagaggatcaccaccgtccgccagggcgacgtcgtggccatccccgccggcgcgccgttctgggtccacaacgacggcgactccccgctcgtcgccatctccgttcacgacgtcagcaacaacgccaaccagctcgaccaaacctccagggtacgtacgtgcgtaatcaatctcgagattaattaattgatggactccatcggtcgaacacctaacgtgcaatgtttcttctgcagcgtttccggctagccggcgggcaggcgaggagcgaggggaggcagaggtacggtgagggcgagtcgtcggagtcggagacggaacgcggcggcgaggagtcgtacaacatcctgagcggcttcgacaccgagctgctcgccgagtcgatgcgcgtcagcccggacatcgcgcgcaagctgcagggccgcagcgacaagcgcggcaacatcgtgcgcgtccgccgcggcggcctccgcatgctccgcccggcgacggagcgggtgaccgacgaggagatgatgaggggcgccaacgccgccgccgccgccgggaacgggatcgacgaggccgtctgcttgatgaagctccgcgagaacgtcgccgacccgatgaaggccgacctctacacccccaatggcggccgcatcaccgtcctcaacagccagaagctccccgtcctcaagctcatcaagatgagcgtcaaccgcggcgtcatgcgccgggtgagacgacgaacgatcactgttttaaacagttggtggacgtccacccgtttttttcatggcatctaaatccttaaaaaaaattttcaaaaaaattaacatgataagttaaaatataatatatcacttcagaaatatgtaaattgaaatttaacttatacaagttgtaacaaaaataacaacttgtaaaagtcgaatttgaacctgcatatttgtaaaatgatatattactaacttgtaattttttaaaatttttttttataattatttaggtggtatataagaaactagtagacgttcacctgagagtttagaatccaacttctatgattaattaacagacacgaattaatcgatggtgtttgatttgatttgcagaacgcgatcctggcgccgcactggaacatcaacgcgcacgcggcggtgtacgcgacgagcgggagcgcgaggctgcaggtggtgagcagcgaggggcggcgggtgttcgacggcgagctccggcgcgggcagatggtggtggtgccgcagagcttcgcggtggcggggcgcgccggcgacgaggggttcgcgtgggtgtcgttccagacgagcgacggcgccatgaacgcgccggtggttggcaagtcgtcggcgctgcgcgggatgccggcggacgtgctggacaacgcgttcggcgtgtcgagggaggaggcgcgcatggtcaagttcgggagggggcaggagctcgccatcttctcccccaagtccggcgccgccgcccgccgccgccgctctcccggccacagggacgacggcgtgctcgccgccccggcctgaggcgtacgtagataccagcgtgagcgcacgtgcgcatgtacatgtagtactaataatgtgcacgttttccgttaagggtgccacgcactgcatgcaccgtatgttggcccgtacatgtacggtgtacccgatctagaataaatgaagtcgctgctgctacc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0127900, RefSeq:Os08g0127900