Os08g0128200

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Revision as of 12:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0128200| Description = Conserved hypothetical protein| Version = NM_001067444.1 GI:115474624 GeneID:4344576| Length = 3219 bp| Definition ...")
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Gene Name

Os08g0128200

Description

Conserved hypothetical protein

Version

NM_001067444.1 GI:115474624 GeneID:4344576

Length

3219 bp

Definition

Oryza sativa Japonica Group Os08g0128200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1605301..1608519

Sequence Coding Region

1605317..1605850,1606835..1607266,1607357..1607669,1607879..1608051

Expression

GEO Profiles:Os08g0128200

Genome Context

<gbrowseImage1> name=NC_008401:1605301..1608519 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1605301..1608519 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcccagcaaccgcctcgccggagctgcggcggcggcggcggcggcgcctcctcctcctcctcctcctccgccgcctcctctacctccgagaggatctcccgcgccgtcggagaaccatacagcgatctcggcgcctctgctgcagcccgcgggggcgggcgcgggcgacgcggcgccgctggcgaagtggctgcggcggctcgaggcgttcctctcggcggcggggctcgcggcgtcgagcccgctcgggaaggccggggcggcgtccgcgctcgccgtgctgggcgtcgcgctgccggcgctggcggtggcgctctccccgtgccgcgggcgcgggaggggttgcgacgagttcgaggtggaggtgttcgaggtgtgcgtgcttctgtcgcaggcggcggccgcggccgtcgcgctcgcgtgcgtgtcgaggaagatggccatgtacggcctccgcaagttcctcttcgtcgacccggagctcggcatgcggatccgcttccagaaggagtacgtcgctaagatcaaggatttcttcagcacaattttgtggtggatattgccatgctttgttgtgaaggtcacacgagaaatgttccgtttctcccatatcttccaagagtcgacttggagatcatgtgctgtactgtttgcttccatcatgtcatggatgtatctgaccacaattatattaacctcctgcatgcttttcaacttggtttgcaacctacaagttattcatttcgatgactatggaaaacttctagaacaagattcagatcctttggtctatttaaaagagcacctgcagcttcgtcataatctctccaaaatcagtcacaggttccgcatgttccttttgctgctcttcttttctgttacagcaagccagtttgccattctgttcaagacaacagcatatactggaccaatcaatttcactaatggtggtgatatagctgtctcttccgttgttcaagttgtcggtcttgtcctttgtttgcatgcagctgctaaaatttctcacagagctcaaaacattgcttcactggctagtcgatggcatgccttagtaacatgctctagtgattctacttatgtaagcacaccaaacagttctgggaaccttgtgccttttccagcacatatgttcttgagagacttttcagaaagtgatttggagtctctggagagtggctcagtacaaggcaattctcatggcacagctcaattggcttcatacatgtcttcataccacaagagggaatcacttgtgctgtatcttctgggcaacccaggtggcatcacgatatttggctggatcgttgatcggacattcctaaatacaattctgatgctcgaattaacacttgtgctcttcgtgcttagcaagaccgttgtggttccggccaaaacattagttcttgattacatcaggtttccatga</cdnaseq>

Protein Sequence

<aaseq>MAPSNRLAGAAAAAAAAPPPPPPPPPPPLPPRGSPAPSENHTAI SAPLLQPAGAGAGDAAPLAKWLRRLEAFLSAAGLAASSPLGKAGAASALAVLGVALPA LAVALSPCRGRGRGCDEFEVEVFEVCVLLSQAAAAAVALACVSRKMAMYGLRKFLFVD PELGMRIRFQKEYVAKIKDFFSTILWWILPCFVVKVTREMFRFSHIFQESTWRSCAVL FASIMSWMYLTTIILTSCMLFNLVCNLQVIHFDDYGKLLEQDSDPLVYLKEHLQLRHN LSKISHRFRMFLLLLFFSVTASQFAILFKTTAYTGPINFTNGGDIAVSSVVQVVGLVL CLHAAAKISHRAQNIASLASRWHALVTCSSDSTYVSTPNSSGNLVPFPAHMFLRDFSE SDLESLESGSVQGNSHGTAQLASYMSSYHKRESLVLYLLGNPGGITIFGWIVDRTFLN TILMLELTLVLFVLSKTVVVPAKTLVLDYIRFP</aaseq>

Gene Sequence

<dnaseqindica>17..550#1535..1966#2057..2369#2579..2751#accctttcccgccctcatggcgcccagcaaccgcctcgccggagctgcggcggcggcggcggcggcgcctcctcctcctcctcctcctccgccgcctcctctacctccgagaggatctcccgcgccgtcggagaaccatacagcgatctcggcgcctctgctgcagcccgcgggggcgggcgcgggcgacgcggcgccgctggcgaagtggctgcggcggctcgaggcgttcctctcggcggcggggctcgcggcgtcgagcccgctcgggaaggccggggcggcgtccgcgctcgccgtgctgggcgtcgcgctgccggcgctggcggtggcgctctccccgtgccgcgggcgcgggaggggttgcgacgagttcgaggtggaggtgttcgaggtgtgcgtgcttctgtcgcaggcggcggccgcggccgtcgcgctcgcgtgcgtgtcgaggaagatggccatgtacggcctccgcaagttcctcttcgtcgacccggagctcggcatgcggatccgcttccagaaggagtacgtcgctaagatcaaggtgatgtctcgccgccttcaaatcgatgtaattttggattacactgaaattcacctagtcattgacttcaattgatagggattagcgagtttttttagataatgatagtgattagtgaggagtagttgctaaattgttttatatttagttaagacattttctcgatgaattactactccactactagattatggcatgaaagtaggtgtcattttactgcaacttgtgcatttgaaggagaaatttgtggactcaggtggaatgtgatgttcagattgtttagcattgaggaaacctggaggattttgaggctgtggttgtaagcttgtgcttgcatctaggttgtaatttagtacgagatcttttgtatggagttacattttttattatggtagcaccttggattcatgggattgtcttcagtgaagggtgaactgcggtgattgattctctcagttatatatgcatttgcatgttgctacttctacttatgcccccatgtgagttgatgtcatgtgcatgggaggtcactttttttgtctgtgccgacaaacctgtttgtgtttttttacatgaagacgcgtcattaggggctgaacaaagaatcgtgctctggaagactcacatttcttcagatatgtctttagcagttctaatgggaggaatcaattgaagcataaagccatacttgatttgttatcaatagacaatgtttggttaggaaatgggcacactctgatttctgtacttttttctttttggaacagaagacaaattaaaaataaaaatgagctgtgtcctgctaggtctatggtctggctgaaactgctatcaccctttgcgtgatgcttcatgctttatttttctagtggatgttttaattgcaaaatttaatgtttaggatggtaataaccatgcatttgttatttgatatgccagagttttgtttgccatattgacatgtgttttcaatctctatggcaggatttcttcagcacaattttgtggtggatattgccatgctttgttgtgaaggtcacacgagaaatgttccgtttctcccatatcttccaagagtcgacttggagatcatgtgctgtactgtttgcttccatcatgtcatggatgtatctgaccacaattatattaacctcctgcatgcttttcaacttggtttgcaacctacaagttattcatttcgatgactatggaaaacttctagaacaagattcagatcctttggtctatttaaaagagcacctgcagcttcgtcataatctctccaaaatcagtcacaggttccgcatgttccttttgctgctcttcttttctgttacagcaagccagtttgccattctgttcaagacaacagcatatactggaccaatcaatttcactaatggtggtgatatagctgtgagtacaatattaaaaatcacataatgttcccttctggttatgtttaaaaacaaaacagatcataaatagatttctcttatgatgcaggtctcttccgttgttcaagttgtcggtcttgtcctttgtttgcatgcagctgctaaaatttctcacagagctcaaaacattgcttcactggctagtcgatggcatgccttagtaacatgctctagtgattctacttatgtaagcacaccaaacagttctgggaaccttgtgccttttccagcacatatgttcttgagagacttttcagaaagtgatttggagtctctggagagtggctcagtacaaggcaattctcatggcacagctcaattggcttcatacatgtcttcataccacaagagggaatcacttggttagtaaatctaaagcttccatttgaagtttgcattgcttaatcttttttcattgtgataacttggaattaatgcataccttactttacaagacattcttttcttttatattgttaagtgttaaagctaacatttcatatacagattttttttttgggtgtcctgtttgattcttatgttttttttattcttctgtgtttcactgcagtgctgtatcttctgggcaacccaggtggcatcacgatatttggctggatcgttgatcggacattcctaaatacaattctgatgctcgaattaacacttgtgctcttcgtgcttagcaagaccgttgtggttccggccaaaacattagttcttgattacatcaggtttccatgatgggggctatcacatctcaaacatctgaatttggtccggatcgctagatatggtgaattgaggatacacatcaggctcctattgccaccatgccagaatccgatctggtggacagaaaatctgatcttctgaggattaaaatcatctgctggatctgagaactacaaggttggtctctcttgaggatttcctgatgaacaccctgttttgccgctaatccacgtcatgccaattttccatgagaaacagagagaacatcatgtaattttgaacagttgatcactgaaactccactctaggctgtgcgctgtgcatagagccagcttcatccatgtaaattgctgtaggcttctcctgtcttttttgttgtgcatattaagatttaaaatttaggggtatagaccacatgatcgatactacaactgaatctaaagttttcgtttatggttgagtggattgttcagatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0128200, RefSeq:Os08g0128200