Os08g0129600

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Revision as of 12:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0129600| Description = Conserved hypothetical protein| Version = NM_001067451.1 GI:115474638 GeneID:4344583| Length = 4991 bp| Definition ...")
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Gene Name

Os08g0129600

Description

Conserved hypothetical protein

Version

NM_001067451.1 GI:115474638 GeneID:4344583

Length

4991 bp

Definition

Oryza sativa Japonica Group Os08g0129600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1652286..1657276

Sequence Coding Region

1652515..1652598,1652930..1653073,1653523..1653634,1653739..1653920,1653996..1654127
,1654247..1655203,1655296..1656081

Expression

GEO Profiles:Os08g0129600

Genome Context

<gbrowseImage1> name=NC_008401:1652286..1657276 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1652286..1657276 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaagaagatattatgtttgacaaccaaacaaagccatgcagatcaagggttgactccaaaagcaatataaatgtgctcaagccaaaatttggatcctcttggggttcccaaattgtcaaagggttcacagctgacaaaaagaccaagaagacagcagctgctgcaagcaagaagccacctcttgcaagtgtggaaaatgttaacaccagcaaccaacagattccatatcattctagggttaagagatctcttatgggagatttcccttgttcacctgctggtgctcaggttcacccccatgtctttgattgccatggcatcaggtccccagcatctcatgatctttttcttgagttggatcatctcagggaacaactacgtgagtcaaaggaaagggaactagcattacagtcagagttgcggcaatgcagagaaaatcctagagtttcggaacttgaaaaggatcttgattcaaggaagaatgaaattgacaggcttgtgcgacttaaaacttcactagaagttgagaaaacaagcctttctgaacagctatcagctctatcttgtatggtagagcagcatgaagaaaatgcaaggttggatgggcatggcaatcgggtttctagtatgaatgggggcaatgcatcttcttcagaaaacttggagattgaagttgttgaactgcgacgtttaaacaaagagcttcaatttcagaaacgaaacctcgcaattaaactctcttcagcagagtccaaattggctgtcattgaaaagaatgccgagagtgagatagttgcaaaggttcaagctgaggcttcattattgcggcacacaaatgcaaacttgagcaagcaggttgagggtctgcaaatgagtcggctaactgaagttgaggagcttgcctatcttcggtggatcaattcttgtctacgtcatgagctcagtaactcagatcaagcagctagagcaatgacagatgcagattataatgatgaaattgcttgtcatgttgatgattgtgatggtgatgcaagacttgatcagaacagttctgatcacaagaagttcagcattgctgagcgtatcaaacaatggtctcagaatgataagaattgtgaagcatctaaaaaggaggcccttcttgacagagcatggattgaagctgcagaatgcagaagcccgacacgcaggcactcactaggtggaccaaaaggatgtgctcaggagtttagcattgtgaagaggcgccaatctgatacctttatctgcctgcctgaagcaacagatgaggcaatctcctgtaataaggatgagacaatcagggagaagcgtgaacttcttgtggataagtatgattttggtcgatctgaaagctcaagatttcttcttggcaagtcagaagtatgcaagtctcaaagtatggatgttgaaaagcgtgccttgcgtattccaaaccctcctcctagaccttcagtttctgtgccacattctggtccatcaaatggatcagctgcgaatccaccaaagcctccgccaccgccaccgcctccaaagttctccacaagaaacgctggggtcatgaagagggcaccacaagttgcagagctttaccattcacttatgagaagggactcaaaaaaggatacttctgggagtggaatctgtgaaactgctaactcagcaaatgtgcggagtagcatgattggtgaaattgagaaccgttcttcgcatttgcaggctatcaaggctgatgttgagactcaaggtgaatttgtgaaatcattgatcaaggaggtgaccaatgcagcttacaaagatatagaagatgtggttgcatttgtgaaatggcttgatgatgagcttggtttcctggtggatgagagagcagtgctgaagcattttgattggccagaaaggaaggcagatactctacgagaggcagcttttggctaccaagacctgaaaaaattggaatctgaagtttcaaactataaagatgatcctcgccttccatgtgacattgcactgaagaaaatggttacaatatcagaaaagactgagcggagtgtctacaatcttctgaggacaagggatgctacgatgagacagtgtaaagagtttaatattcctactgactggatgctcgacaacaatcttattggcaagataaaattttcttctgtcaaattagcaaagatgtacatgaaaagagttgctatggaacttcaatacatgggacctctgaacaaagatccagctttggagtatatgctacttcaggctgtgagatttgccttcagaatgcatcagtttgctgggggattcgatccagagaccatggatgcatttgaagagctgaggaatcttgtgcatgtcagaaacagcacccagtag</cdnaseq>

Protein Sequence

<aaseq>MKEDIMFDNQTKPCRSRVDSKSNINVLKPKFGSSWGSQIVKGFT ADKKTKKTAAAASKKPPLASVENVNTSNQQIPYHSRVKRSLMGDFPCSPAGAQVHPHV FDCHGIRSPASHDLFLELDHLREQLRESKERELALQSELRQCRENPRVSELEKDLDSR KNEIDRLVRLKTSLEVEKTSLSEQLSALSCMVEQHEENARLDGHGNRVSSMNGGNASS SENLEIEVVELRRLNKELQFQKRNLAIKLSSAESKLAVIEKNAESEIVAKVQAEASLL RHTNANLSKQVEGLQMSRLTEVEELAYLRWINSCLRHELSNSDQAARAMTDADYNDEI ACHVDDCDGDARLDQNSSDHKKFSIAERIKQWSQNDKNCEASKKEALLDRAWIEAAEC RSPTRRHSLGGPKGCAQEFSIVKRRQSDTFICLPEATDEAISCNKDETIREKRELLVD KYDFGRSESSRFLLGKSEVCKSQSMDVEKRALRIPNPPPRPSVSVPHSGPSNGSAANP PKPPPPPPPPKFSTRNAGVMKRAPQVAELYHSLMRRDSKKDTSGSGICETANSANVRS SMIGEIENRSSHLQAIKADVETQGEFVKSLIKEVTNAAYKDIEDVVAFVKWLDDELGF LVDERAVLKHFDWPERKADTLREAAFGYQDLKKLESEVSNYKDDPRLPCDIALKKMVT ISEKTERSVYNLLRTRDATMRQCKEFNIPTDWMLDNNLIGKIKFSSVKLAKMYMKRVA MELQYMGPLNKDPALEYMLLQAVRFAFRMHQFAGGFDPETMDAFEELRNLVHVRNSTQ </aaseq>

Gene Sequence

<dnaseqindica>4679..4762#4204..4347#3643..3754#3357..3538#3150..3281#2074..3030#1196..1981#ctctactactagtaggagtagtggtggtagtgtcgtcgggagtggcacggcactgcggggtttttgatttttttttctttttcgtcttcttaagttgaaatcgagctgatttgggggggttcttgctggagcgggggatgataggttgcggacttgcggtcaggaggaggtcaaaaggagggagaaggctttgattagtgggggatttcaggattggcgatcgtcttgagctcgctcggtgtgcagaacggctgggttcttttgtggacgggggagtttgctttcacctcgatctgtacaaatcgatggtgggtggtgggaggtaagagtcgcgctttacttgttgtgtccttcttgatgatgagcccaatgtgggttcagtctactcgctgtgttcaaatgcttgatttttgtggaagcttttgggttttgattggcattgtgtttatcatcttcgccaaaatcggttggtcccatttgctgttctcattcgattttggttctagggagttggatcttggggcattttgctccttctccttcgtgttttagttagttcaagaggatgcttgtttgcagttagcagttttctgctttttggtgattaggtttcgggagatttcatcttcgtcgacgatgcattgatggtcgatgctacaaatgtgtactgtacggccacaaaaaaattgaaaggcagtgcttctttttagcctttggaaacgataatctcaaaaaagtattaagcttgatttgctcagaccttgatgttatttatttgcttcatacaaatgcttctaaagagagagataaaggcagttgtaatgctgcttaaatgttgctctcttcagagtagtacacaaatggactccatggaagtagttaaagatgtggtttgatatggttctgggtagcattgcaataaagaattcatttagtctagtactcctgaattgatgctttatttccttatttatggacaatttttgaaggcatccattttaaaaggcattcatatctggttcttcattttttttctttattcttgttttcatctgtgttattgatgtttggttgctagctcaattcatgtttttctcacttatttgcaggtgttagtacaggtactggaacattttaatcaagtcgagtcacctctgcatggttagtgttctgggtcaggcaaaatcgctacaagatgaaagaagatattatgtttgacaaccaaacaaagccatgcagatcaagggttgactccaaaagcaatataaatgtgctcaagccaaaatttggatcctcttggggttcccaaattgtcaaagggttcacagctgacaaaaagaccaagaagacagcagctgctgcaagcaagaagccacctcttgcaagtgtggaaaatgttaacaccagcaaccaacagattccatatcattctagggttaagagatctcttatgggagatttcccttgttcacctgctggtgctcaggttcacccccatgtctttgattgccatggcatcaggtccccagcatctcatgatctttttcttgagttggatcatctcagggaacaactacgtgagtcaaaggaaagggaactagcattacagtcagagttgcggcaatgcagagaaaatcctagagtttcggaacttgaaaaggatcttgattcaaggaagaatgaaattgacaggcttgtgcgacttaaaacttcactagaagttgagaaaacaagcctttctgaacagctatcagctctatcttgtatggtagagcagcatgaagaaaatgcaaggttggatgggcatggcaatcgggtttctagtatgaatgggggcaatgcatcttcttcagaaaacttggagattgaagttgttgaactgcgacgtttaaacaaagagcttcaatttcagaaacgaaacctcgcaattaaactctcttcagcagagtccaaattggctgtcattgaaaagaatgccgaggtaacattacttaaactaaattatttttcaggtgggttgagtcgtagtttgtttccagctaaccttttctataccatgcttattgtcaccagagtgagatagttgcaaaggttcaagctgaggcttcattattgcggcacacaaatgcaaacttgagcaagcaggttgagggtctgcaaatgagtcggctaactgaagttgaggagcttgcctatcttcggtggatcaattcttgtctacgtcatgagctcagtaactcagatcaagcagctagagcaatgacagatgcagattataatgatgaaattgcttgtcatgttgatgattgtgatggtgatgcaagacttgatcagaacagttctgatcacaagaagttcagcattgctgagcgtatcaaacaatggtctcagaatgataagaattgtgaagcatctaaaaaggaggcccttcttgacagagcatggattgaagctgcagaatgcagaagcccgacacgcaggcactcactaggtggaccaaaaggatgtgctcaggagtttagcattgtgaagaggcgccaatctgatacctttatctgcctgcctgaagcaacagatgaggcaatctcctgtaataaggatgagacaatcagggagaagcgtgaacttcttgtggataagtatgattttggtcgatctgaaagctcaagatttcttcttggcaagtcagaagtatgcaagtctcaaagtatggatgttgaaaagcgtgccttgcgtattccaaaccctcctcctagaccttcagtttctgtgccacattctggtccatcaaatggatcagctgcgaatccaccaaagcctccgccaccgccaccgcctccaaagttctccacaagaaacgctggggtcatgaagagggcaccacaagttgcagagctttaccattcacttatgagaagggactcaaaaaaggatacttctgggagtggaatctgtgaaactgctaactcagcaaatgtgcggagtagcatgattggtgaaattgagaaccgttcttcgcatttgcaggctgtaagtagaatattctgctcagattattggacatatgtagaattgtagataccaatgaaaagctagctggttctcgcactgatgtatggctatttactttactctttgttcattttcagatcaaggctgatgttgagactcaaggtgaatttgtgaaatcattgatcaaggaggtgaccaatgcagcttacaaagatatagaagatgtggttgcatttgtgaaatggcttgatgatgagcttggtttcctggtatgaatgttcagtagcactatactctgagcaatttactttgttttttcactcatgtaattgcattacttgaaggtggatgagagagcagtgctgaagcattttgattggccagaaaggaaggcagatactctacgagaggcagcttttggctaccaagacctgaaaaaattggaatctgaagtttcaaactataaagatgatcctcgccttccatgtgacattgcactgaagaaaatggttacaatatcagaaaagtacgactaaatttactataagtatacagattacatacatttaacagaaatagtggtaaacttaaatgggaatactgatattttcatttgcattcttaattcaggactgagcggagtgtctacaatcttctgaggacaagggatgctacgatgagacagtgtaaagagtttaatattcctactgactggatgctcgacaacaatcttattggcaaggtatatgttctataattttccgtatttgaaggtttgatttcttagtgctacattgttgtcagcatatgatacaggaaatgacctagtcagaattatgatgcttggcctgcaaaaagtaaaatttgttggttaccagtattcagaatagatagcatggagactaccaggataagttttcaagtacctattggttaacttgaggtgcttgttatatagtatctaaggttattttcatctactgaaacttaggaatgtggtacgctttgcataggtaccactgttgtttgcttgtgaacattttgcagattatgttgataccacaaaaaggttgtaaaacagaagcagtttgcaacgatcacctagaccatcgtttacatcctgttggattaatcattgcctttctattaactggagtaatcgttgtctttctatttccttgataactgcagataaaattttcttctgtcaaattagcaaagatgtacatgaaaagagttgctatggaacttcaatacatgggacctctgaacaaagatccagctttggagtatatgctacttcaggctgtgagatttgccttcagaatgcatcaggtaacacatttctagcaggaactccacaaaaagaaaattcccctgtgcatactgcatactccattctgattagatgtatacttgggcaattatgttataccacatctcataattgtttcatctgcctcctgattcccattccgtatataattgcacatatttattttccacaggtgcttgtatatgttttatgtccttcagaaacattatggttatttctgcattacgtttgtgctattttctgctgttaactcttgttatgacatattaagatgtgttatttaaaccttaatgtcagctgcatattctaaattgccgctcatttttgcagtttgctgggggattcgatccagagaccatggatgcatttgaagagctgaggaatcttgtgcatgtcagaaacagcacccagtaggaagttaaaaaaatgtggagaaggggataattctagcttactctctcagtaagcatagcagagagctttgttttggtttatgtgattgtgtgattgatgattagtgtgtgtatgactgtatctatgtgtttcagtgtgtgctaggctgaagaacaccagctggtgtttgcctatgatttttgtagctaccatgactgaaaaaagaggaaaaaagaaaaaaaatgcatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0129600, RefSeq:Os08g0129600