Os08g0132100

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Revision as of 12:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0132100| Description = Conserved hypothetical protein| Version = NM_001067464.2 GI:297607927 GeneID:4344596| Length = 5479 bp| Definition ...")
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Gene Name

Os08g0132100

Description

Conserved hypothetical protein

Version

NM_001067464.2 GI:297607927 GeneID:4344596

Length

5479 bp

Definition

Oryza sativa Japonica Group Os08g0132100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1794794..1800272

Sequence Coding Region

1794794..1794980,1795306..1795608,1798727..1798889,1798908..1798944,1799652..1800272

Expression

GEO Profiles:Os08g0132100

Genome Context

<gbrowseImage1> name=NC_008401:1794794..1800272 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1794794..1800272 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacgaaagcgagaggggcggtatggtaatcgacgacgtcggcggcggcggactgaatcttgcaattgttgcaggcaagcgtaagcgggagatcacatgggaagagaaggcggcgttgacagttcttgatattcctgccgagcgtgattgcagcctcatagactcggagaaagattactcatctatggctggctgccaggccggagaacacgctagtatatttggcattgacaagaatggggatgattctgatgaaccgtgtgctaaggatgatgccaatcaaagtgatatggctgctctgaaggaggaggaggagaattgggagctggacagtgaaccagagctcacatgggatgagaaggtggttcaagttctaaacatggttcgacaccgagagatcaccgaatataaccccaagcagttttgctcaattcctactcgattttgtgcctacaacatagccttctttgacctggacaaagagtcaaagcttgcacgtggaccacctatcaagtcgctagctttccctgactactggtgggagatggactctgtcaatgtgattgcaatcaaggtggccgagtctgatgtgggttaccctatcagggtatttggcactgtgctggccagggatgagtatgatttcaggcgtgacaggaacaatccccagatcatcacctcgccggaggacacactaactctgacaggacctaatcgagcgctgggtgcaacagacaaaatgtatttcgagttcaatttgaagattagagacgatggcgatgtcgacaaagatttctgcaaaggtgtgcgagaacacaatgccatctgctatacaaagcagccgatgactttatcgctagagagctgcctgagtacaattgattttgtgtatagtcctgttcaattagctgtggaagcttctgttgcagtcaaaattaagggggttgtatccacgtttttcactggcaaagtgactgcttggactactggagatgatcagaacaaaatcatcctgtatgacagtgaagtggaaggcagcaacagagttgttggagctgatggatcagtcgatctgactcgctgtttcgtagccgtcaatttggatgatgaactggtgctcaatgtctgtgtttctgaaggagctggctcaatctttgagctcgttcttggacacaatgatgaagaatgtgtccgtgagcaaggtccctatgaactgcaggtgaatgttgtttggacagctgcctttaagcatcgacagcgcagaaaattgtttgagcgtatcggtgacttccgcgtgttaaggtga</cdnaseq>

Protein Sequence

<aaseq>MADESERGGMVIDDVGGGGLNLAIVAGKRKREITWEEKAALTVL DIPAERDCSLIDSEKDYSSMAGCQAGEHASIFGIDKNGDDSDEPCAKDDANQSDMAAL KEEEENWELDSEPELTWDEKVVQVLNMVRHREITEYNPKQFCSIPTRFCAYNIAFFDL DKESKLARGPPIKSLAFPDYWWEMDSVNVIAIKVAESDVGYPIRVFGTVLARDEYDFR RDRNNPQIITSPEDTLTLTGPNRALGATDKMYFEFNLKIRDDGDVDKDFCKGVREHNA ICYTKQPMTLSLESCLSTIDFVYSPVQLAVEASVAVKIKGVVSTFFTGKVTAWTTGDD QNKIILYDSEVEGSNRVVGADGSVDLTRCFVAVNLDDELVLNVCVSEGAGSIFELVLG HNDEECVREQGPYELQVNVVWTAAFKHRQRRKLFERIGDFRVLR</aaseq>

Gene Sequence

<dnaseqindica>1..187#513..815#3934..4096#4115..4151#4859..5479#atggcggacgaaagcgagaggggcggtatggtaatcgacgacgtcggcggcggcggactgaatcttgcaattgttgcaggcaagcgtaagcgggagatcacatgggaagagaaggcggcgttgacagttcttgatattcctgccgagcgtgattgcagcctcatagactcggagaaagattactcatgtgagtgtatatataatccacaactaatcgatcgatcattcatcattcatgtacatctgttctgctttgttcactcgtttgcatcagtcagtatatccctcttaattggtacttcctccgttttatattataagactttctagcattgtattcattcattcatatatatgttaatgaatctaaatatatgtatgtgtttagattcattaatatctatatgaatatgggtaatgctagaaagtcttataatatgagacggaggcagtattttttttttgtttgttggatgggaaacatcaaaaccaaaactttgcttgttttgcagctatggctggctgccaggccggagaacacgctagtatatttggcattgacaagaatggggatgattctgatgaaccgtgtgctaaggatgatgccaatcaaagtgatatggctgctctgaaggaggaggaggagaattgggagctggacagtgaaccagagctcacatgggatgagaaggtggttcaagttctaaacatggttcgacaccgagagatcaccgaatataaccccaagcagttttgctcaattcctactcgattttgtgcctacaacatagccttctttgacctggacaaagagtgtgagtacatccatccactgttagggttttctataggatcgtctagccttagatctagtcgggtagagctcttgggtggatgaacaaatatggatgaaacaacagagagggaagtgagagggtttagggatacgactggttgacgttgaggaggaggaagaggcgccggccatcgtcgttgttgtcgcgcttgacgtggacggcggcgacgatggtcatgacggcggcggtcgtaggcgaggacgacgaggcgtggcgcggcgtgatgcttcccgtcactggctgcgccccctcgatcagttagggttttgtgggtggagttggcggtggcagtgaacctcgtatcgtgtgccccctcggcctccacccctgtttatatggcgcagggtgacaggggcccaccagccaatgggctgggcgccccccgatcagggcacgggtcaaggtccctttgtgccgttgggctcaaggggagggagatctatctaacattctcccccttgatctcactatttcttttagcctttttctattccatcacagatttgcacatagagcatgtttcatcgtcacggttaatcgccgatggattcgacagccactatacacatctctattatactttaacttttgggccctgtagtccaggattcataaggcttcccttaaacccatgccggctacatgttccttgaacacattgggtggtaggtctttcgtgagcggatccgcgagcatcctttctgttctaatgtgctcgagactgattgtttgatcccggactttgttcttcacaacatagtactttatgtcaatgtgtttggcagcaccacttgactgattgttgtgagcgtacattactgtaggtttgttatcgcggtataactttagtactcttcctgtccatagctcatacggtgttttgggcaccgatttgcttgaaactctgttgaggatatgaatggcggtttttaacgcctccatccataaacccaatggtagggtggagtagctcatcatgctgcgcaccatatccataagggtacggttacgcctttcagctaccccattctgtttaggttcgcccggtgttgaatagtgggctactattccattctctagcaagaaccttgcaaaaggtccagggacttgcccataaggcgtatgccgaccatagtactccccccatggttagatcttactattttaaactttatatcatgctgattttcaacttcagctttgaatatcttaaatttatccaatgcttctgatctttctttaattggataaatataaccataatgggagtaatcgtctgtgaatgttatgaacgagtcatagccatccacacttttcacaggaaatggaccacaaatatctgtatgaatgatctccaaaattcccgcgcttcgttttgcaccctttttgatgctctttacaaattttcctttaatgcattctatgcattgttctaaatctgagaactccaatggaggaagaatatcactcttaactagtctctcaattctccccctcgaaatatggcctaaacgatagtgccataatttcgatgagacatcaggagttctctttcttttcttgttttcttttgtcaacgaggacacaacattcacattctcagaaagagataacaaataaagctcatcttgcaacacaacaaagaattgggctcaatcccagagtgtgacaccgtctctgagtacctcgaaagaataaagagccagtttactggttcttcaaagacttatgcgacacagctgataaagcagcttgtgacagagaggtaccatgggggtggtgtaagagaccacattcttaggatgagcaacatggcttccaagttgaagccaatggatttgggtatcacagatgactttctggtccatctggttatggcctcattgccaaagcattttgacaactttattgtcaacttcaacataagtctagagaaatggaattttgaaaagctcatcgctaattgtgtgcaagaggaggaaagaatcaaagagtccaatggtggctctattaactatgttaaagataacaagaaaaagagccacaaaccatcccctcaaaagggaaatagcctcagcatctgcctcagcaacaacatttcactgttgaaaaggatcagtgtctccactgcaagaagacatgacattacaagaaagattgtcctgacttcctgaaaatgatcatggcaaagaaaggtgagaacattattacatttgtaaatgaatctcattatgttggttattttagatccacatggtggattgattctggagtaactattcatgcgtgtaattgtttaaagggattccgttcgacgaggactacgcaaagaaacaaaagatccattagagttgccaatggagttgaagcaaaagtagaagctgttggagtctttgcctagagctcccgattggcttcacacttttacttcgagatgttttttatgtaatttaataagtgtatcgaaataggattttgatggatatgattgccattttggaaatggcaaatgtgaactatggtataataatgcatgtattggtcttgctgtgttgcaagatgagctttatttgttatcttttgctgagaatgttaatgttgtgtcctcattgacaaaaggaaacaagaaaagaaagagaactcctgatgtctcatcgaaattatggcactgtcgtttaggccatatttcgagggggagaattatgactagttaagaatgacattcttcctctattggagttctcagatttagaacaatgcatagaatgcattaaaggaaaatttgtgagtggaattggcggcggcagcgaacctcgtatcgtgtgccgccccggcctccacccctgtttatatggcacggggtgacgggggcctaccagccaatgggctgggcgccctcgatcagggcgcgggtcaaggtccccttgtgccgttgggctcaagggggagagagatctatcaaacatccatttgttataatatcatccttgtttcttgttcattctttgactattgtacatgtcttaaaaaaatttactttcctggtttgatttatgtctctggcttgattttgcagcaaagcttgcacgtggaccacctatcaagtcgctagctttccctgactactggtgggagatggactctgtcaatgtgattgcaatcaaggtggccgagtctgatgtgggttaccctatcagggtatttggcactgtgctggccagggatgagtatgatttcaggtgtgtctatctgttcaggcgtgacaggaacaatccccagatcatcacctcgccggtatgttactgattcgttcctcctccttgctagattaatactatttactgttcaaatccaaatgccattgcctttacaatccgctgtctgatattctacactataaatgacctgttaattaggctcacattgttaagtgaaatgtagacggttgcatagttccataatggctggtgaaacgcctgatacgatagaaatcctgtttcctggacattaaaatccctactgccagatcttaaaccttgctgtcaatatcatatatccaccgaatctgattgcctggtagtccattcctgctgtctaagagggtcaggacagttactgttggaacatcaatcaatccatgacttccccttttttgtgagatttgatttacttaattagtttctatatcccaagatcctggtacttttacctgttatactattttgttaatccagtgcaacggtagtgctctgggatcatgtacgttttgtactggaaaaagtggaaacaaaagaatttatattggcatgttgctcatttgaacgtgggaatttgaaatgcaattcacaggctgtttcatatacctaaaattattatctgtatgtattatgtacccaaatttctcttaacatattgttggcactgtctgaactgtattcgacttatcgagcctggtgtttttggtggcatttttgacatgatttcccctaatctatttacaggaggacacactaactctgacaggacctaatcgagcgctgggtgcaacagacaaaatgtatttcgagttcaatttgaagattagagacgatggcgatgtcgacaaagatttctgcaaaggtgtgcgagaacacaatgccatctgctatacaaagcagccgatgactttatcgctagagagctgcctgagtacaattgattttgtgtatagtcctgttcaattagctgtggaagcttctgttgcagtcaaaattaagggggttgtatccacgtttttcactggcaaagtgactgcttggactactggagatgatcagaacaaaatcatcctgtatgacagtgaagtggaaggcagcaacagagttgttggagctgatggatcagtcgatctgactcgctgtttcgtagccgtcaatttggatgatgaactggtgctcaatgtctgtgtttctgaaggagctggctcaatctttgagctcgttcttggacacaatgatgaagaatgtgtccgtgagcaaggtccctatgaactgcaggtgaatgttgtttggacagctgcctttaagcatcgacagcgcagaaaattgtttgagcgtatcggtgacttccgcgtgttaaggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0132100, RefSeq:Os08g0132100