Os08g0132600

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Revision as of 12:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0132600| Description = Conserved hypothetical protein| Version = NM_001067466.1 GI:115474668 GeneID:4344598| Length = 3031 bp| Definition ...")
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Gene Name

Os08g0132600

Description

Conserved hypothetical protein

Version

NM_001067466.1 GI:115474668 GeneID:4344598

Length

3031 bp

Definition

Oryza sativa Japonica Group Os08g0132600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1832561..1835591

Sequence Coding Region

1832808..1833021,1833191..1833490,1833619..1833836,1834554..1835171

Expression

GEO Profiles:Os08g0132600

Genome Context

<gbrowseImage1> name=NC_008401:1832561..1835591 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1832561..1835591 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggatgaaagcgagcggagcggtatggtaatcgacgacgtcggcggcggactgaatcttccaataattgttgcaggcaagcgtaagcgggagctcacatgggaagagaaggcgttgacagttcttgatattgtcgggtcccaacagcaccccgcatgccaacctgccgagcgtgattgcagcctcatagactcggagaaagattactcatctatggccggctgccaggccggagaacacgctagtatatttggcattgacaagaatggggatgattctgatgaaccgtgtgctaaggatgatgccaagcaaagtgatgtggctcctctgaaggaggaggagaattgggagctggacagtgaaccagagctcacatgggatgagaaggtggttgaagttctaaacatagttcgacgccgagagatcaccgaatataaccccaagcagttttgctcaattcctactcgattttgtgcctacaacatagccttctttgacctggacaaagagtcaaagcttgcacgtggaccacctatcaagtcactagctttccccgactactggtgggagatggactctgtcaatgtgattgcaatcaaggtggccgagtctgatgtgggttaccctatcagggtatttggcactgtgctggccagggatgagtacgatttcaggtgtgtctatttgttcaggcgtgacaggaacaatccacagatcatcacctcgccggaggacacactaactctgacaggacctaatcgagcgctgggtgcaatagacaaaatgtatttcgagttcaatttgaagattagagacggtgatgtcgacaaagatttctgcaaaggtgtgcgagaacacaatgccatctgctatacaaagcagccgatgactttatcgctagagagctgcctgagtagaattgattttgtgtatagtcctgttcaattagctgtggaagcttctgttgcagtcaaaattaagggggttgtatccaagtttttcactggcaaagtgactgcttggactactggagatgatcagaacaaaatcatcctgtatgacagtgaagtggaaggcaggaacagagttcttggagctgatggatcagtcgatctgactcgctgtttcgtagccgtcaatttggatgatgaactggtgctcaatgtctgtgtttctgaaggagctggctcaatctttgagctcgttcttggacacaatgatgaagaatgtgtccttgagcaaggtccctatgaactgcaggtgaatgttgtttggacagctgccttgaagcatcgacagcgcagaaaattgtttgagcgtatcggtgacttccgcgtgttaaggtga</cdnaseq>

Protein Sequence

<aaseq>MADESERSGMVIDDVGGGLNLPIIVAGKRKRELTWEEKALTVLD IVGSQQHPACQPAERDCSLIDSEKDYSSMAGCQAGEHASIFGIDKNGDDSDEPCAKDD AKQSDVAPLKEEENWELDSEPELTWDEKVVEVLNIVRRREITEYNPKQFCSIPTRFCA YNIAFFDLDKESKLARGPPIKSLAFPDYWWEMDSVNVIAIKVAESDVGYPIRVFGTVL ARDEYDFRCVYLFRRDRNNPQIITSPEDTLTLTGPNRALGAIDKMYFEFNLKIRDGDV DKDFCKGVREHNAICYTKQPMTLSLESCLSRIDFVYSPVQLAVEASVAVKIKGVVSKF FTGKVTAWTTGDDQNKIILYDSEVEGRNRVLGADGSVDLTRCFVAVNLDDELVLNVCV SEGAGSIFELVLGHNDEECVLEQGPYELQVNVVWTAALKHRQRRKLFERIGDFRVLR</aaseq>

Gene Sequence

<dnaseqindica>248..461#631..930#1059..1276#1994..2611#gtcctcaccaaacaaaccctagcctcttcataatcggagaaaaagaaagagaaaaccctaaggctctctcccctccggcggcgacaggacgggttctcgatcagggttgccagcgaacacgtctacggtacactcttcgatcgcctcgattctttcttccgattcttcgacgaaatcgcattgtatggccacctaatcttacctgtgtccctttctttctgtgttcttcttcttcatgggcgtcaagatggcggatgaaagcgagcggagcggtatggtaatcgacgacgtcggcggcggactgaatcttccaataattgttgcaggcaagcgtaagcgggagctcacatgggaagagaaggcgttgacagttcttgatattgtcgggtcccaacagcaccccgcatgccaacctgccgagcgtgattgcagcctcatagactcggagaaagattactcatgtgagtgtatatataatccacaactaatcgatcgatcattcatcattcatgtacatctgttctgctttgttcactcgtttgcgtcagtcagtatatccctcttaattggtttttttttcttgtttgttggatgggaaacatcaaaaccaaaactttgcttgttttgcagctatggccggctgccaggccggagaacacgctagtatatttggcattgacaagaatggggatgattctgatgaaccgtgtgctaaggatgatgccaagcaaagtgatgtggctcctctgaaggaggaggagaattgggagctggacagtgaaccagagctcacatgggatgagaaggtggttgaagttctaaacatagttcgacgccgagagatcaccgaatataaccccaagcagttttgctcaattcctactcgattttgtgcctacaacatagccttctttgacctggacaaagagtgtgagtacatccatccatttgtttgttataatatcatccttgttccttgttcattctttgattattgtacatgtcttaaaaaaatttactttcctggtttgatttatgtctctggcttgattttgcagcaaagcttgcacgtggaccacctatcaagtcactagctttccccgactactggtgggagatggactctgtcaatgtgattgcaatcaaggtggccgagtctgatgtgggttaccctatcagggtatttggcactgtgctggccagggatgagtacgatttcaggtgtgtctatttgttcaggcgtgacaggaacaatccacagatcatcacctcgccggtatgttactgattcgttcctcctccttgctagattaatactatttattgttcaaatccatatgccattgccttttcaatccgctgtctgatattctacactataaatgacctgttaattaggctcacattgttaagtgaaatgtggacggttgcatagttccataatggctggtgaaatgcctgatacgatagaaatcctgtttcctggccattaaaatccctactgccagatcttaaaccttgctgtcaatatcatatatccactgaatctgattgcctggtagtccattcctgctgtctaagagggtcaggacagttactgttggaacatcaatcaatccatgacttccccttttttttgtgagatttgatttacttatttagtttctatatcccaagatcctggtacttttacctgttatactattttgttaatccagtgcaacggtagtgctctgggatcatgtacgttttgtactggaaaaaagtggaaacaaaagaatttatattggcatgttgctcatttgaacatgggagtttgaaatgcaattcacaggctgttcataacttcatagacctaaaattattatctgtatgtattatgtacccaaatttctcttaacatattgttggcactgtctgaactgtatttgacttatcgagcctagtgtttctggtggcatttctgacatgattttccctaatctatttataggaggacacactaactctgacaggacctaatcgagcgctgggtgcaatagacaaaatgtatttcgagttcaatttgaagattagagacggtgatgtcgacaaagatttctgcaaaggtgtgcgagaacacaatgccatctgctatacaaagcagccgatgactttatcgctagagagctgcctgagtagaattgattttgtgtatagtcctgttcaattagctgtggaagcttctgttgcagtcaaaattaagggggttgtatccaagtttttcactggcaaagtgactgcttggactactggagatgatcagaacaaaatcatcctgtatgacagtgaagtggaaggcaggaacagagttcttggagctgatggatcagtcgatctgactcgctgtttcgtagccgtcaatttggatgatgaactggtgctcaatgtctgtgtttctgaaggagctggctcaatctttgagctcgttcttggacacaatgatgaagaatgtgtccttgagcaaggtccctatgaactgcaggtgaatgttgtttggacagctgccttgaagcatcgacagcgcagaaaattgtttgagcgtatcggtgacttccgcgtgttaaggtgatatgtagtatgaagatttatatgggggaagctgttacatctcaagcagttctttcttgttatatagattataatttttttgttcagctgagttgaactcgtgcttaactgaaaatctgcctgcaagacttatttagttatatgtactggtagactggtaatctataagattactgatgtctagtagggagtatggatctgtctggtagtctgtataaccttttctgaacctaccaaagtttattttgcgttcttggagaagtgtcttgtctgtcattgttacttactgggttgtgagcatcggattgaggtagtttgtagaggtttgagcgccatgtgtgctctactgttgccatttgctgttgagagatgctgagaacctgacgtttatggctatatatatgttgatgttttgtaagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0132600, RefSeq:Os08g0132600