Os08g0133100

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Revision as of 12:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0133100| Description = Similar to Tpv2-1c protein (Fragment)| Version = NM_001067469.1 GI:115474674 GeneID:4344601| Length = 1778 bp| Defi...")
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Gene Name

Os08g0133100

Description

Similar to Tpv2-1c protein (Fragment)

Version

NM_001067469.1 GI:115474674 GeneID:4344601

Length

1778 bp

Definition

Oryza sativa Japonica Group Os08g0133100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1850241..1852018

Sequence Coding Region

1850281..1851768

Expression

GEO Profiles:Os08g0133100

Genome Context

<gbrowseImage1> name=NC_008401:1850241..1852018 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1850241..1852018 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtgaagagatggacgcggtgaatcgcaatgggatttgggagcttgttgatctcccacatggccatcgcccaattggactcaaatgggtctataaattgaagaagaacgaggccggaaaggtggtcaagcacaaagctcgtctcgtcgccaggggatttgtccagcaacctgggattgattttgacgaggtgtttgcgcccgtcgcgcgcatggagtcaattcgtctcctgcttgcggtcgccgcccaaaaagggtggcacgtccatcacatggacgtgaagtctgcctttctcaatggagatttggcagaggaggtgtatgtgaagcagccccctggttttgtcgtcgccggagaagaagacaaggtcctccgcctgcgcaaggctctttatggcctgcggcaggcgccaagagcctggaatgcgaagcttgattgtactctgaaggagctcggtttcgaccaaagcaagcatgagcacgccatgtaccgacgaaacaatggtggctctgctctactcgtcggggtctatgtagatgaccttgtgatcaccgggccatcgacaagagcaattgaacaattcaaggaagaaatgaaggcaaagtttcagatgagtgatcttggcttgctctctttctaccttggaattgaggtgaagcaaggagatgatggaatctccctgaaccaggggcgctatgctcagcgcattgtggagtcggctggcctcaaggactgcaacccttgcgccactccaatggaagaaaggctcaagctgagccgtgatagcacggcacctcccgttgatgcaacaaaatatcgacggctggttggtagccttcgctatcttgtgcacacacggccagacctagcatttgctgttgggttcgtgagtcgcttcatggagcggccaactgaggagcacatggtggccgtgaagcgcattctacgctatgtcgctggcacgatggagtacggacttcattacaaaagggagaaagaggagcagcggctgattggttacagcgacagcgacctcgccggcgacattgatacaaggagaagcacaagtggcatgttgtttttccttggttcaagcttggtgagttggcaatccatcaagcagagagtggtggctttatcttcctgtgaagcagaatatgttgcagccaccaatgctgccacacaaggaatctggttggctcgattgctcggcgaacttcttgggaagcaacctaaagcgatcgagctaaaggtggacagcaagtctgccttggcgctggcaaagaaccctgtcttccatgagcgcagcaagcatattgatttgcgctatcacttcatcagaagctgcttggaggaaggaagcatcagcgccagcttcatcaccaccatggaccagctcgctgacattctaacgaaggcattggggcgagttcgattccatgagcttgttgcaaggattggagtggtcaagattagttcagaatag</cdnaseq>

Protein Sequence

<aaseq>MREEMDAVNRNGIWELVDLPHGHRPIGLKWVYKLKKNEAGKVVK HKARLVARGFVQQPGIDFDEVFAPVARMESIRLLLAVAAQKGWHVHHMDVKSAFLNGD LAEEVYVKQPPGFVVAGEEDKVLRLRKALYGLRQAPRAWNAKLDCTLKELGFDQSKHE HAMYRRNNGGSALLVGVYVDDLVITGPSTRAIEQFKEEMKAKFQMSDLGLLSFYLGIE VKQGDDGISLNQGRYAQRIVESAGLKDCNPCATPMEERLKLSRDSTAPPVDATKYRRL VGSLRYLVHTRPDLAFAVGFVSRFMERPTEEHMVAVKRILRYVAGTMEYGLHYKREKE EQRLIGYSDSDLAGDIDTRRSTSGMLFFLGSSLVSWQSIKQRVVALSSCEAEYVAATN AATQGIWLARLLGELLGKQPKAIELKVDSKSALALAKNPVFHERSKHIDLRYHFIRSC LEEGSISASFITTMDQLADILTKALGRVRFHELVARIGVVKISSE</aaseq>

Gene Sequence

<dnaseqindica>41..1528#gtttgcagaggcggagggtgatgatgcatggcgagcagccatgcgtgaagagatggacgcggtgaatcgcaatgggatttgggagcttgttgatctcccacatggccatcgcccaattggactcaaatgggtctataaattgaagaagaacgaggccggaaaggtggtcaagcacaaagctcgtctcgtcgccaggggatttgtccagcaacctgggattgattttgacgaggtgtttgcgcccgtcgcgcgcatggagtcaattcgtctcctgcttgcggtcgccgcccaaaaagggtggcacgtccatcacatggacgtgaagtctgcctttctcaatggagatttggcagaggaggtgtatgtgaagcagccccctggttttgtcgtcgccggagaagaagacaaggtcctccgcctgcgcaaggctctttatggcctgcggcaggcgccaagagcctggaatgcgaagcttgattgtactctgaaggagctcggtttcgaccaaagcaagcatgagcacgccatgtaccgacgaaacaatggtggctctgctctactcgtcggggtctatgtagatgaccttgtgatcaccgggccatcgacaagagcaattgaacaattcaaggaagaaatgaaggcaaagtttcagatgagtgatcttggcttgctctctttctaccttggaattgaggtgaagcaaggagatgatggaatctccctgaaccaggggcgctatgctcagcgcattgtggagtcggctggcctcaaggactgcaacccttgcgccactccaatggaagaaaggctcaagctgagccgtgatagcacggcacctcccgttgatgcaacaaaatatcgacggctggttggtagccttcgctatcttgtgcacacacggccagacctagcatttgctgttgggttcgtgagtcgcttcatggagcggccaactgaggagcacatggtggccgtgaagcgcattctacgctatgtcgctggcacgatggagtacggacttcattacaaaagggagaaagaggagcagcggctgattggttacagcgacagcgacctcgccggcgacattgatacaaggagaagcacaagtggcatgttgtttttccttggttcaagcttggtgagttggcaatccatcaagcagagagtggtggctttatcttcctgtgaagcagaatatgttgcagccaccaatgctgccacacaaggaatctggttggctcgattgctcggcgaacttcttgggaagcaacctaaagcgatcgagctaaaggtggacagcaagtctgccttggcgctggcaaagaaccctgtcttccatgagcgcagcaagcatattgatttgcgctatcacttcatcagaagctgcttggaggaaggaagcatcagcgccagcttcatcaccaccatggaccagctcgctgacattctaacgaaggcattggggcgagttcgattccatgagcttgttgcaaggattggagtggtcaagattagttcagaatagaagaacaaggattaaggggagattgttagtataatccttgttctagttagttatttggtttccttagacagtaagctataggctgcagctgttactcggttgtcagactgctgctattagtggtagtagtcaattttgattttacctctagcaggaacatagcagcagcagtattgtcggttcagcaaccgacctatccatgtactataaatatagctattgtgctaacataagtaagctttttcagctc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0133100, RefSeq:Os08g0133100