Os08g0133600

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Revision as of 12:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0133600| Description = Conserved hypothetical protein| Version = NM_001067470.1 GI:115474676 GeneID:4344602| Length = 3200 bp| Definition ...")
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Gene Name

Os08g0133600

Description

Conserved hypothetical protein

Version

NM_001067470.1 GI:115474676 GeneID:4344602

Length

3200 bp

Definition

Oryza sativa Japonica Group Os08g0133600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1913057..1916256

Sequence Coding Region

1913302..1913542,1913628..1913936,1914124..1914341,1915469..1916089

Expression

GEO Profiles:Os08g0133600

Genome Context

<gbrowseImage1> name=NC_008401:1913057..1916256 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:1913057..1916256 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggacacggatgagcggtggcgcgctgcggtgattggcggtggtggagatgctgctactgcgacggagcctagtctgcccgccgcgataacgcggcgtctgcgggagctcgcatgggaggacaaggacaaggagaaggctcgcacggtcgttgatctagtcgactccgaaacccctatcgaatgcgatcacgaagagggtcatctttgccctagtccctgctccgacattccttctatggttgcagctagcggtggtggtggtggcaatgaagagatgggcaaggtgaattgtaatgagaagcacacatatggtgaggagaaggagaaggagaaggagaaggtggtggagactaagtcggagctgaagcctaaaccgaggaggaagaattgggaggaggaggagctcacatgggaggagaaggtgttgaaggttcttcacatggttcgtatatgggaggtgactgaattcgaccccaagatggagtggtttgagcctacccgcctttgcctcttcaacaccgccttcttcgacctcgacaaagagtctaaggctgggcttgggccaccgattcactcgctcacttcctctgattatcgccatttggagacctccatgaatatcatttcaatcaaggttgtcgaatctgacgtgggttaccctatcagcatcttcggcaccgtgttagcgagagatcagtatgactataggtgtgtgtatttgttcaggcgtagcagggacgatccccagatcatcacctcaccggaggacatgctaactttgacaggcccaaagcgaggtcttggtgcaaaagattatatgtttttcgagttcaatttaaagatgaagggcgatgatggagttgacaaagattttagcaaaggtttgctgccatacaatgtcgtctgtcgaacagggagactcgagactttacatctcaggagctggctaagtgtagtggaatttgcattcgtgactgttcaatatgccgttgaagctacccttgcggtgaaaatgttagggggggcatctgttttcactggtagagtgactgcttggactactggaaatgatgaagatgaaatagttctctatgacagtgaagttgcagacactcggacagagattacagctgatggatctgttcagctaaatcgtggtttagtagttgtcccattggataaggagctggtgctcaatatttgtgtgtttgagggtgaagatgaagctcaaagctttgagttcattctagggcactatgatgaagaatttacctgcaagcaaggctgttatgagtttcaagttaatattatttggacggcagtaaagactcggcgacggcccaatatgtggaagcgcattggttgcattgtactgttactttga</cdnaseq>

Protein Sequence

<aaseq>MVDTDERWRAAVIGGGGDAATATEPSLPAAITRRLRELAWEDKD KEKARTVVDLVDSETPIECDHEEGHLCPSPCSDIPSMVAASGGGGGNEEMGKVNCNEK HTYGEEKEKEKEKVVETKSELKPKPRRKNWEEEELTWEEKVLKVLHMVRIWEVTEFDP KMEWFEPTRLCLFNTAFFDLDKESKAGLGPPIHSLTSSDYRHLETSMNIISIKVVESD VGYPISIFGTVLARDQYDYRCVYLFRRSRDDPQIITSPEDMLTLTGPKRGLGAKDYMF FEFNLKMKGDDGVDKDFSKGLLPYNVVCRTGRLETLHLRSWLSVVEFAFVTVQYAVEA TLAVKMLGGASVFTGRVTAWTTGNDEDEIVLYDSEVADTRTEITADGSVQLNRGLVVV PLDKELVLNICVFEGEDEAQSFEFILGHYDEEFTCKQGCYEFQVNIIWTAVKTRRRPN MWKRIGCIVLLL</aaseq>

Gene Sequence

<dnaseqindica>246..486#572..880#1068..1285#2413..3033#aatagcccatctgacatctttgccaaaccctaaccgcctctggctcggcggcggcggcggcggctcgtccccgaagagcagccggagttggagaggatcggtgttcccgctacggtatgtacgctctctcacgccaatcaatcctctatattcggatgcaattcccaatgcaattgtgaacgttcagaatttttagattaccctcagtcttatatcatctcatctggcagcggcggcaaagatcgatggtggacacggatgagcggtggcgcgctgcggtgattggcggtggtggagatgctgctactgcgacggagcctagtctgcccgccgcgataacgcggcgtctgcgggagctcgcatgggaggacaaggacaaggagaaggctcgcacggtcgttgatctagtcgactccgaaacccctatcgaatgcgatcacgaagagggtcatctttgccctagtccctgctccgacattccttctagtaagtatttacctcaggaaatatccctctccgtttgttcattgttttgccggatacatgatttttttttttcaaaattccctagtggttgcagctagcggtggtggtggtggcaatgaagagatgggcaaggtgaattgtaatgagaagcacacatatggtgaggagaaggagaaggagaaggagaaggtggtggagactaagtcggagctgaagcctaaaccgaggaggaagaattgggaggaggaggagctcacatgggaggagaaggtgttgaaggttcttcacatggttcgtatatgggaggtgactgaattcgaccccaagatggagtggtttgagcctacccgcctttgcctcttcaacaccgccttcttcgacctcgacaaagagtgtgagtacatgcattcaccatgcatcaatcccttaacctcaattccttgtatatgatctaattcaacttaacattcgtatgcggcctctctatccattcatcacatttgttgatggatttattttagtgtgtaaaaaccatacatattcttttgtctgattgaagtctcatgtctctgattttacagctaaggctgggcttgggccaccgattcactcgctcacttcctctgattatcgccatttggagacctccatgaatatcatttcaatcaaggttgtcgaatctgacgtgggttaccctatcagcatcttcggcaccgtgttagcgagagatcagtatgactataggtgtgtgtatttgttcaggcgtagcagggacgatccccagatcatcacctcaccggtttgtattcgattcgtcctccctcttactacactgccattcactactcaatagcatatttccttatttttatgagattagactgtttctgtcaatatgttctggttttaagttttaccgggatggaataatggaaaccatctacgtggtcaaaacaaccgtataaaagttcagggaggtgatgttatagaaccatgtaaaatttaggatcaaactcaatccgttttgtgagatatgaaattgagaaaccaggaaaaaataagtccttttcttgctgtttgcctgtttcatatctcacaaactagattgggtttttttcttgaacttttacatagttgcataatatcacctcacccacacatgagataattttcagtattattggaaatatcaaatgtttatcaagtggtttgcacgtctgcacatattttctcttgctttaacctgttataaacactgtaagaacaaatcggcttggctacataccaccaaaagattcatcaattcatctcagaaaatgcatttcactctgttatattctttttttcttgcacattaaatcgtgtaaatgaacagttggtcctcaatgtactagtgagcaagtttgattcacacatacacttaatgttttatctcattttgtgaaaatagaaatgaggcatataatgtgattaacagggcatgatggaagttgacagtgctaaattatcaagtcttggatcttctaatgacattaactgaattctcataagttgcttatgattaaattgcatgatctagagaagtatatctttgtcatttaatcggtccatactgcccataaaatgcatgagttggctttcatttttgtttgatcttttagttagactatgtcttattttagtctaacaagcacacatacatgagagaccgaccaatttatagaaattgggttggtgtcagactcaccaccaccgaaggttttggtgagcaactgttttggttgtaaacacttaaatatcaaattgttggtatcttctcaagtttctgttgaacctggtcttgacatcatctgaattatgcttgattactgagcttggttccttttatgtaattttgttatgttatttccctaaatccctttgcaggaggacatgctaactttgacaggcccaaagcgaggtcttggtgcaaaagattatatgtttttcgagttcaatttaaagatgaagggcgatgatggagttgacaaagattttagcaaaggtttgctgccatacaatgtcgtctgtcgaacagggagactcgagactttacatctcaggagctggctaagtgtagtggaatttgcattcgtgactgttcaatatgccgttgaagctacccttgcggtgaaaatgttagggggggcatctgttttcactggtagagtgactgcttggactactggaaatgatgaagatgaaatagttctctatgacagtgaagttgcagacactcggacagagattacagctgatggatctgttcagctaaatcgtggtttagtagttgtcccattggataaggagctggtgctcaatatttgtgtgtttgagggtgaagatgaagctcaaagctttgagttcattctagggcactatgatgaagaatttacctgcaagcaaggctgttatgagtttcaagttaatattatttggacggcagtaaagactcggcgacggcccaatatgtggaagcgcattggttgcattgtactgttactttgaaggctgtaaaaagggtgcacttatcagagtcatatatgatcggtgcactcaaaacatatctatctatccataaaatttcctaagaatattctcttagatatgtattgctagtctcagtctgtaaatgatgatcacgcttatcttaattagacacatgcatgcgtggt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0133600, RefSeq:Os08g0133600