Os08g0135800
| Gene Name |
Os08g0135800 |
|---|---|
| Description |
Zinc finger, CCCH-type domain containing protein |
| Version |
NM_001067479.1 GI:115474694 GeneID:4344611 |
| Length |
7454 bp |
| Definition |
Oryza sativa Japonica Group Os08g0135800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:2018193..2025646 |
| Sequence Coding Region |
2021895..2022448,2022739..2025028,2025132..2025164 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:2018193..2025646 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:2018193..2025646 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgactggtgaaacaaggaaagaacggtccaagtgggatacaaaaggacctcctgatatagtggagatcagtgaagatgagtctcttcctatgaatatggatgatcataaaaagggcaatgatgatcatagaaagggcagtgatttgctcccttctcaggattttggtcatggtaatgacaagcaaattggtgaatctctgaacctcaaatctactgtctctatgcaccatggtagcgctggacatgagcaggatcgagctgatggactcaacaaagatatcaaggaaaggtcatccaaggcatcctctgaaaggttgcctcttagaatgggtgatgaggatcataataaaaatgactggcacaacagaggctttgaaaaggcagctggtaaccaaggtatgagcagatatgcagatgacagaaggcgtggtgatgggtggggtacaactcttagccgtggttattcttctaggatatcatcatctggtccagatgcgtggaagagaagtcgcagtccactatctccaagaggtggttggaacaggtcacgcaggaacagaagccgttctagaagtagaagcaggagcatagggcgaggtagaggtagaagcagaagcagaagcagaagtccttatttcagtgaccgtggatctgaatggagggttgagagaagcagatcatctggaggacctgctcttccctgtagggattttgtagctggtagatgcagaagaggctcaaattgcaggttccctcatgaagatggtgtgcgcaggcagtttgatgagcattatcctgtagattcaagggaaaagtatgggcatcagaatagggacttcatggatccacgagaacaagatgactatttaaggaataggccacctcgaggtggccattatgatgaaggaacttgggaaagatctgaacctcgaagggagtatcggtctacgatgccatgccatgattttgtcaaaggaagatgcagtaggggtgcgaattgccgatatgttcatgatgattccacccctcatggtggatggagagatgaggttagagataatgctattggtagaagtggccctgattcatcatatgggaacaggactgagcaccgtagaacaaataaaaacccctgcaaattttttgctaacggtggatgccgtcgtggccaaaattgcccatatctccacgaggaagcttcccagagccaaatgggactgggtgcacctgatgagcctggttacactggtgggcctacaacaagaggagattacttgagctggagtgaacaaaataattctgtgcaggcaagttctcatgttttgtcaagagatgacagagaaaaccctgttcctcagggtactggcagaaatgattctcgatatgagaacaaaaaccggcattccaaagatgctggaagtagtcagtaccagatattccctcaggatgattttggttcagtagggcaaaacaaacctgaaatagctgcttcacaactgccacagttcataccttctgtccaaacaggcacagagagcataaacattgacaaggtatctgacatgggtggtcagagtggacctggaaccgttggcaatttgagtatgcaaatcgggatgcattctgctaatcttttaggagggcataacttgggccaaaaagcagagagccaagatgcaatttctcaaatttctgctgcaccatctcttccgggcgccacccaattgcagaatactacatcctcagtgcctttgaatagccaagttcagcaaagtgacttttcattacatccaaataggcaggaccagtttgcagttcctcatgcaactacaaataactctgctcctagcatgcagagccagccagttgctccttatatggggcacagccaacacggctacattatgggggcacaatcattaccagatctctctgtgcataatggacaaattttcaatgttggtcaagttccacagaatcttccaacaatcgtgcatgctgggcagaatcaggcaacaagtgacacacccaacctgggccgagatagtggtgatcaaggcttgcaaaacacacataatttccagcctgttgctccaaatgagcaaactcagagtcaaaccttgcaagggttatcagtggtggccagttccagctcagttgatatggctggagctcctctttctcacaatgcagtgtcaagtcaggaagaagtccgtcgtgttactgcatctttggcccagtactttgttccttctctgactgctgatacctctgggctgcagtcgtctcagcctgatccaaattcgagtttgatgaacaattcgtctgctgcacctcaagcagttcaacctaatcactggccttggttacaacaagcaggaatggtccaaccttcacatattgttccacctgaacaaccagctccccagacatttcaggcaccaatggctgctggtagtagtaatggcaaccctctgcttttaccccattcggttgcaccgactgttcctgctgctgccttggcgaccaatgaaactacacctgcagaaaataagaaagaagaaccaaaggacactgatgctgaggctaatgaagatggtgagaacaagaagagcaaggattccaaggcgttgaagatgtttaagcttgcactggctgactttgtgaaggatgcacttaagcccacctggaaagagggtcaaatgagcagagaggttcataaaacaattgtgaagaaggttgtcgacaaagttacgaccacagttgaaaatactcctcaaacaaaagagaagattgatatttacatgtcctactccagagaaaagctaaacaaactcgtccaggcatatgttggcaagtatgccaagaaagattga</cdnaseq> |
| Protein Sequence |
<aaseq>MTGETRKERSKWDTKGPPDIVEISEDESLPMNMDDHKKGNDDHR KGSDLLPSQDFGHGNDKQIGESLNLKSTVSMHHGSAGHEQDRADGLNKDIKERSSKAS SERLPLRMGDEDHNKNDWHNRGFEKAAGNQGMSRYADDRRRGDGWGTTLSRGYSSRIS SSGPDAWKRSRSPLSPRGGWNRSRRNRSRSRSRSRSIGRGRGRSRSRSRSPYFSDRGS EWRVERSRSSGGPALPCRDFVAGRCRRGSNCRFPHEDGVRRQFDEHYPVDSREKYGHQ NRDFMDPREQDDYLRNRPPRGGHYDEGTWERSEPRREYRSTMPCHDFVKGRCSRGANC RYVHDDSTPHGGWRDEVRDNAIGRSGPDSSYGNRTEHRRTNKNPCKFFANGGCRRGQN CPYLHEEASQSQMGLGAPDEPGYTGGPTTRGDYLSWSEQNNSVQASSHVLSRDDRENP VPQGTGRNDSRYENKNRHSKDAGSSQYQIFPQDDFGSVGQNKPEIAASQLPQFIPSVQ TGTESINIDKVSDMGGQSGPGTVGNLSMQIGMHSANLLGGHNLGQKAESQDAISQISA APSLPGATQLQNTTSSVPLNSQVQQSDFSLHPNRQDQFAVPHATTNNSAPSMQSQPVA PYMGHSQHGYIMGAQSLPDLSVHNGQIFNVGQVPQNLPTIVHAGQNQATSDTPNLGRD SGDQGLQNTHNFQPVAPNEQTQSQTLQGLSVVASSSSVDMAGAPLSHNAVSSQEEVRR VTASLAQYFVPSLTADTSGLQSSQPDPNSSLMNNSSAAPQAVQPNHWPWLQQAGMVQP SHIVPPEQPAPQTFQAPMAAGSSNGNPLLLPHSVAPTVPAAALATNETTPAENKKEEP KDTDAEANEDGENKKSKDSKALKMFKLALADFVKDALKPTWKEGQMSREVHKTIVKKV VDKVTTTVENTPQTKEKIDIYMSYSREKLNKLVQAYVGKYAKKD</aaseq> |
| Gene Sequence |
<dnaseqindica>3703..4256#4547..6836#6940..6972#gcgctattccgttattcgaagcgtgctctgctcgctgctgctcctccacctctcccaattagggttttcgctggctgcggcggcggcggcggcggcggacggcggcgaagtcaggcggcctctccggcatccgctccgtcgaggtgagcccctcccaccctcttcccctttcccctcccgtacggatcccgcgcctagggtttcctccctcccgtaggtgaacccttgcgattgggcgtgatttgggcggctgcttgctcgctcgcgagcttggttggtggctgctttggccgggatttgggtgcgttgggactctcgggtgtgggtctgcgacagattagcaccggttgattttgttagattaggggatttggaggggtttgggattgcatccccaaagctgagatcttttatggctgggtctaaggatggattgcaatctgttgggtctgtattctccattcttcgagttgactatgtggagttgctttctggttagattaggtatagctgcgtacgagttagatcttcatgttgctaggacagtttctcgtgtctggattggaaatttctgtcttgatgtgtatgttctctatacgggagccgcgttgggtttagggttcttttcacatttttttttcttcatgagattaatggataaatacctgggttgtgcctattattaatactaatcaaacacgatttattatgtggcgtactggcgaatgatgacaaacttcgttctttttttcagatgaaaagcaaatgcggtatggtcctgtgatttaagctggaagatccgatgctgtgttgtgaggcttggacacctttcacattctgagtctctcaggttggtttctatactacagtgccatcctgttcctgttgtttcttgatgtgtagagtatgtcaaccttgcttgcttgtcatgtttccttaagttctcgatgttccatgcattgacgtaatacagtctgtagaccatccttctgaaagaagggctcctagcaaaccatgtagatcccaagtgaagaacccctaattaacttgctgttgtggacttgtggttctcttttgtgtcatctttctgtttccttcatttgtggtgattgttggctgtttcccttgcttgtatgtgcttttccattcttagaattgcatgcaaatacactgttaatgcacccaaatttactgaccaatgttgtgcctattgtttaatcttgaaagttgaaaccaagaactgttgtgttcttttttgcttagataaccatcagatggaatatgacatgctagctatatggtccatgtaaaacgactctatatggttggcttcttggattctttagacaatgtagggttagcgttttgatgtgcttagcgctagaattgggagatgattgtggtaggtgaggggacataggaattcatgcgagctgatagaattatctttctcacatgcaggattatgtaaatgccactttttggagtgtctgcccttttggtttagtctccattcctcaagactatagctagcaattatataaagaaaaaaaattgaactgttaattgccaccaagtcggcaaaatcgctggaacacaacattcgagggagaaacttcagtggaatacgagtagtatcagtgccccaaggtctctgcaatcagagacagtaacaactgaaccttaagtatcgaccaagtctggcaaaacactggaacacagtaaatgaaggagaattttggtgcaatctgttgatgccccagataacagcaattactgcttgacattgttttcttggtaggttgtgtttgtagatttagccgtcctgtaagtgtagaaagcaaacattcttgtcatatatttacctgtaagttgtataggtttatttgagtggttataatgtatatgttgaatgaagtattccatggtttttgattgtgaactatgccagatgaataaaaaacactggtttgtacctgggtgtggaatttataagttcttcacaagtctgatgactcttacagtcctgctgtaaaaaagttattgcttcttatctctgcataaggttcattttccattgtgtgattgtgtgcaatcttgatgttgggcattttctccaccttttgactgtgccaaatccaatctccacagttctggccaattattcaaatcgcatgcttagttgtgctaaatctgctataataattattccattctacttttatgaagccgtgtgactaatcgtcagctagttgataaatcggatagggagcacgacttgagggatacgactttgacttggcaccagaggacgcattggagcaagggcagctacagggtgccgcttggcaggcctggtttatcgagcccattgagtgaaaagggggatgagaggattgtcgggtccattgggcacagcaagtagtagcagactagcagtagaagtaactggtatatatagtaataacagtctgaagtcaactaaatgacagtcacgactatccttggaagatgggcaatcgactttactgactaaaaaaacatctattctaatattccacaggacaaaactgtaggctatactttatacttattgcctttcttgggcattcaaatggacagtgaaatacgtactgatggaaattgcaggctatagtactatactttatactgttgcagtatggtgttaatatcccaacccgcttacgcacatgtacaaggaagcagatgggtgatgctgaagtttcagcaattgctggcaaaaatacgtgttcagtttggtacatgttgataagttgctaaattgttgagtgtcctgttgtttgatcttagaaataagcaagatagatgtgctgactgtagtctgatgtggggaaggtaatcaaagcgctctagaggataactactcacattcctgttgggacacgagggagttcctgaaaatcctcaaaaataattcatggaaatagtgcacactagggtttgagtgcttgtgaattcccttcaacaagtgttggtatacgtagttgcctacaaagaacaaatgaaacaaaaatacagagaaaagtatgtcctgagctttttggtgagggtatcaattaaacaaaaataccagagaaaagtatgtcctgagctttttggtgagggtatcaattatttgccacccctaaaattgattcttatgaggatttgccactcaaatgtccaagcaatgtaccgtatgactaaaatttggaaagtgtaggtggcatataacttgtacaataagaaatttttcttagttttttgggacatatcttatgttgtatctatataatgagagtggttagccacttaggcggttaccttgaatccttgatagtggaaggtctgtttcagtatacccctcctggctttagcgttcttttactagatatgtcttacttgatcctggatcctacttattatacagctgtcagtcagttgttaagtgtctcaactttgttgatgtttctgaatcatgtcctttgagaaagctatatcttttgcgcatactgcagcagtcacttttgttgttgaagtattctattcttccattgattataatatatgcaaacgatctttgattatttcagatagaccgacaagagtactttcggataagggaaaggaggttgtgcaccaggaactacttctttgttggactaataaagaagggttaaaatgactggtgaaacaaggaaagaacggtccaagtgggatacaaaaggacctcctgatatagtggagatcagtgaagatgagtctcttcctatgaatatggatgatcataaaaagggcaatgatgatcatagaaagggcagtgatttgctcccttctcaggattttggtcatggtaatgacaagcaaattggtgaatctctgaacctcaaatctactgtctctatgcaccatggtagcgctggacatgagcaggatcgagctgatggactcaacaaagatatcaaggaaaggtcatccaaggcatcctctgaaaggttgcctcttagaatgggtgatgaggatcataataaaaatgactggcacaacagaggctttgaaaaggcagctggtaaccaaggtatgagcagatatgcagatgacagaaggcgtggtgatgggtggggtacaactcttagccgtggttattcttctaggatatcatcatctggtccagatgcgtggaagagaagtcgcagtccactatctccaagaggtggttggaacaggtcacgcaggtgtgtttgaacaagtaattagtttaattaactgtgcaactggtaacttttttcttgtatattgtgtagcagctgttggagatgattttaaaatgaaatttatcaagaatgaaatatccaagatagattgtatggtttgtttgttctataaatgtcaaagatgatgctcacataagaagtttttacaatttctatggaatacatttatttgaaattctaatgaaaaattcaatttactagtttcttttccctgcctctttaatatatttgttttcttttacactttacaggaacagaagccgttctagaagtagaagcaggagcatagggcgaggtagaggtagaagcagaagcagaagcagaagtccttatttcagtgaccgtggatctgaatggagggttgagagaagcagatcatctggaggacctgctcttccctgtagggattttgtagctggtagatgcagaagaggctcaaattgcaggttccctcatgaagatggtgtgcgcaggcagtttgatgagcattatcctgtagattcaagggaaaagtatgggcatcagaatagggacttcatggatccacgagaacaagatgactatttaaggaataggccacctcgaggtggccattatgatgaaggaacttgggaaagatctgaacctcgaagggagtatcggtctacgatgccatgccatgattttgtcaaaggaagatgcagtaggggtgcgaattgccgatatgttcatgatgattccacccctcatggtggatggagagatgaggttagagataatgctattggtagaagtggccctgattcatcatatgggaacaggactgagcaccgtagaacaaataaaaacccctgcaaattttttgctaacggtggatgccgtcgtggccaaaattgcccatatctccacgaggaagcttcccagagccaaatgggactgggtgcacctgatgagcctggttacactggtgggcctacaacaagaggagattacttgagctggagtgaacaaaataattctgtgcaggcaagttctcatgttttgtcaagagatgacagagaaaaccctgttcctcagggtactggcagaaatgattctcgatatgagaacaaaaaccggcattccaaagatgctggaagtagtcagtaccagatattccctcaggatgattttggttcagtagggcaaaacaaacctgaaatagctgcttcacaactgccacagttcataccttctgtccaaacaggcacagagagcataaacattgacaaggtatctgacatgggtggtcagagtggacctggaaccgttggcaatttgagtatgcaaatcgggatgcattctgctaatcttttaggagggcataacttgggccaaaaagcagagagccaagatgcaatttctcaaatttctgctgcaccatctcttccgggcgccacccaattgcagaatactacatcctcagtgcctttgaatagccaagttcagcaaagtgacttttcattacatccaaataggcaggaccagtttgcagttcctcatgcaactacaaataactctgctcctagcatgcagagccagccagttgctccttatatggggcacagccaacacggctacattatgggggcacaatcattaccagatctctctgtgcataatggacaaattttcaatgttggtcaagttccacagaatcttccaacaatcgtgcatgctgggcagaatcaggcaacaagtgacacacccaacctgggccgagatagtggtgatcaaggcttgcaaaacacacataatttccagcctgttgctccaaatgagcaaactcagagtcaaaccttgcaagggttatcagtggtggccagttccagctcagttgatatggctggagctcctctttctcacaatgcagtgtcaagtcaggaagaagtccgtcgtgttactgcatctttggcccagtactttgttccttctctgactgctgatacctctgggctgcagtcgtctcagcctgatccaaattcgagtttgatgaacaattcgtctgctgcacctcaagcagttcaacctaatcactggccttggttacaacaagcaggaatggtccaaccttcacatattgttccacctgaacaaccagctccccagacatttcaggcaccaatggctgctggtagtagtaatggcaaccctctgcttttaccccattcggttgcaccgactgttcctgctgctgccttggcgaccaatgaaactacacctgcagaaaataagaaagaagaaccaaaggacactgatgctgaggctaatgaagatggtgagaacaagaagagcaaggattccaaggcgttgaagatgtttaagcttgcactggctgactttgtgaaggatgcacttaagcccacctggaaagagggtcaaatgagcagagaggttcataaaacaattgtgaagaaggttgtcgacaaagttacgaccacagttgaaaatactcctcaaacaaaagagaagattgatatttacatgtcctactccagagaaaagctaaacaaactcgtccaggtaacaatgagcttccactctcagcgctgtccacctggcatctcttgtcatttgagaaactaaactcacacatataggctaattgggctgtgtttgtgtgtaggcatatgttggcaagtatgccaagaaagattgaagacatggtgcctgttcttcctgcattgtattagaaagattgaagcagccttagctgtccccaagtttaggattcttcttttgtcttcaaagctagtttaggatcctgtaatttagggatttgattaaaatcacaaacatatttttcccctcccaatttcaatgttcactatggtggtttgacaggtagagtattttgctggtagggcaactgaaccaaatgttacctcaatgtaacttttgtagaatattcatccgagtcatgaagctttctgtatgagattgtacaatctttggatcatctgtatgagcataagctgagatacacccgatggttgtgtttgtgctaatctgtgctgtccctttcagtgtgcagcacaaacaagaagtgtaagctagctgctactaccagtctattttgtcacatgtcagggactcagggttaggaacatatttttaacctgaattttattcgctggatcc</dnaseqindica> 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| External Link(s) |
