Os08g0137400

From RiceWiki
Revision as of 12:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0137400| Description = Cupredoxin domain containing protein| Version = NM_001067491.1 GI:115474718 GeneID:4344623| Length = 1351 bp| Defin...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0137400

Description

Cupredoxin domain containing protein

Version

NM_001067491.1 GI:115474718 GeneID:4344623

Length

1351 bp

Definition

Oryza sativa Japonica Group Os08g0137400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2114688..2116038

Sequence Coding Region

2114952..2115150,2115588..2115913

Expression

GEO Profiles:Os08g0137400

Genome Context

<gbrowseImage1> name=NC_008401:2114688..2116038 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:2114688..2116038 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtgggctcgaggtccagccatggcggcagcggcagcggcagcggtggtgatggtcgccgccgttctggccggccaggcgatggccgccggcgcgacgacgtacacggtgggcgcgccggatgggctgtgggacatggagaccgactacaaagagtgggtcgctcgccggacattccaccccggcgacaagctcacgttcacgtactcgcgtgagctgcacgacgtggtggaggtgacgaaggcggggtacgacgcctgctccaacgccaacaacatctccgccttccgctccggcaacgacctcgtcgccctcaccgccgtcggcacccgctacttcctctgcggcctcaccggccactgcggcagcggcatgaagatccgcatcgacgtcgtcgccgccgcctcctccggccccgcagccgccgccgcgccgctgccgtcgacgtcgtccgtgaccgccgccgtcgccggaagccgcctagtcctcgtgctcttgtatgctcttctgccattgtggtag</cdnaseq>

Protein Sequence

<aaseq>MEWARGPAMAAAAAAAVVMVAAVLAGQAMAAGATTYTVGAPDGL WDMETDYKEWVARRTFHPGDKLTFTYSRELHDVVEVTKAGYDACSNANNISAFRSGND LVALTAVGTRYFLCGLTGHCGSGMKIRIDVVAAASSGPAAAAAPLPSTSSVTAAVAGS RLVLVLLYALLPLW</aaseq>

Gene Sequence

<dnaseqindica>265..463#901..1226#cattcgatcgatcgatcgatcatatatatatatggatgagctacctacactgatatgatccaccacaattaatgtgctcgagacgacgcagcaacaaccgccgcgccattgatgactaattgagatcgatcgatagatagtataagagatcgaccacgagctctcgatcagcctagctatagctatagatagatatacaatctctctctctctctctctctctctctctctctctctgattgttctcttctgcttgcctcttccatggagtgggctcgaggtccagccatggcggcagcggcagcggcagcggtggtgatggtcgccgccgttctggccggccaggcgatggccgccggcgcgacgacgtacacggtgggcgcgccggatgggctgtgggacatggagaccgactacaaagagtgggtcgctcgccggacattccaccccggcgacaagctcagtcagtaatccaaatccaaatcgagttttagttatctctgttttcttgggttttcttttgtactttttaaccatttgaatttttaatttcaaaaataaaccattctaaatctatttccagaatctgaacatttttggcacaccaaacccaccagacttgacaaaataacgtcaacacgccagccgtagccggcgtcatagtttagttttgtactatcataccaaccatatcgatcggagtgggcaaataatagcactgccacgctagttagacctgcgtcggtgttgtcttggtaaaagcttcaaatcttaattacatataagttttggaagagtttaattattttttaaattgaagattaaaaatgttctaaaaattaaaacaaattcttgcgatgagcttaatcctgttcttgatttggatcaatgcaagtgcagcgttcacgtactcgcgtgagctgcacgacgtggtggaggtgacgaaggcggggtacgacgcctgctccaacgccaacaacatctccgccttccgctccggcaacgacctcgtcgccctcaccgccgtcggcacccgctacttcctctgcggcctcaccggccactgcggcagcggcatgaagatccgcatcgacgtcgtcgccgccgcctcctccggccccgcagccgccgccgcgccgctgccgtcgacgtcgtccgtgaccgccgccgtcgccggaagccgcctagtcctcgtgctcttgtatgctcttctgccattgtggtagcattaattaattagtctcttgtgtgtatatttttgtaattgtaagtttaagtacacgtatatgctttgatttagttaatattttgtacttctggttttaatttgtggttattgatcggattttag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0137400, RefSeq:Os08g0137400