Os08g0141000

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Revision as of 12:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0141000| Description = Conserved hypothetical protein| Version = NM_001067506.2 GI:297607950 GeneID:4344639| Length = 4226 bp| Definition ...")
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Gene Name

Os08g0141000

Description

Conserved hypothetical protein

Version

NM_001067506.2 GI:297607950 GeneID:4344639

Length

4226 bp

Definition

Oryza sativa Japonica Group Os08g0141000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2288393..2292618

Sequence Coding Region

2288393..2288879,2290753..2290976,2291977..2292618

Expression

GEO Profiles:Os08g0141000

Genome Context

<gbrowseImage1> name=NC_008401:2288393..2292618 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:2288393..2292618 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccgagcggaggagcgaccgcgaaggggactacggtggctggatggcggcgggctcgtcgtcgggggcgatggtgcggcgggagacgaggaggtcggaggtggggttggagaagtcatcgtcgttgccgccgcctttgcccaaggaggcagtcaagattgacaagaagaagacgaagaagaggagtgactacagtatcgaggatattctgaagattcttgatatgagcgaggaggagttggctgtagtgaaggaggagtgggctgaaatggaggcgaaggaaaaggaagaggcaccaaaggtgaaggaaaccatggtggagtgggaggcgagggtcaagaagaggattgaggaggagaacaaagcatatcgagagatgatgcggtcgcaggacgacgatgaatcctcctgggacgctatccagtatcgcaaatcctggaacgctagatggtccggcacccgtggttccttcgaggacaccacgagaataccccccatgcgtttcacccacaagcctgcactggattacagtgccgctgccacgcctactctgcaggtcttcttcgtcaaggttgcagtggcaaagggggccttacagtggccacttgatgtgtttggtattgttgccatgcgcgatgttcttgaccgtaatcgcaacattgtcttccaccgcacaagggacaactgccagaccctcactgaagaggaccggaatttggtactggtaggccctacccgtgctgttgcgctgtggatgccggaacctgtgatcatcgatgtggaactaaaagtgaagggcactactgaatctgaggataaaggcttgagcaatctagctgtgccgctcttatgcgatgatacgagttattcgtacactagcaagctaagcacactggagtttagacttggctatattacgtcctctgttgaggccacaatattcatacgagtcattcaggggtcatggcctgatggtttgagtgctcaatttgctgcctttaccactggtttctatggcaagggtatggcctgtcgagacagcaatatgagtattgatgatgagagaattgtcctgcttgattctagaggtgagaaagtagttgttactagtgatggcaatatcaagctttcacggcgtgttgtttctgttgagagtaacacagagctgaaagtttctgtcaaggcatggaaagctgacaacaatgtcgtcgaaaatgagaatgttttcacagcattagaagctggtgtaagctatgctacacttgacattgccttttgtaagctggaaatcagtgttgcctggtcactcatttcgcagtatcctgtttctgccaactcggtactgtag</cdnaseq>

Protein Sequence

<aaseq>MEAERRSDREGDYGGWMAAGSSSGAMVRRETRRSEVGLEKSSSL PPPLPKEAVKIDKKKTKKRSDYSIEDILKILDMSEEELAVVKEEWAEMEAKEKEEAPK VKETMVEWEARVKKRIEEENKAYREMMRSQDDDESSWDAIQYRKSWNARWSGTRGSFE DTTRIPPMRFTHKPALDYSAAATPTLQVFFVKVAVAKGALQWPLDVFGIVAMRDVLDR NRNIVFHRTRDNCQTLTEEDRNLVLVGPTRAVALWMPEPVIIDVELKVKGTTESEDKG LSNLAVPLLCDDTSYSYTSKLSTLEFRLGYITSSVEATIFIRVIQGSWPDGLSAQFAA FTTGFYGKGMACRDSNMSIDDERIVLLDSRGEKVVVTSDGNIKLSRRVVSVESNTELK VSVKAWKADNNVVENENVFTALEAGVSYATLDIAFCKLEISVAWSLISQYPVSANSVL </aaseq>

Gene Sequence

<dnaseqindica>1..487#2361..2584#3585..4226#atggaggccgagcggaggagcgaccgcgaaggggactacggtggctggatggcggcgggctcgtcgtcgggggcgatggtgcggcgggagacgaggaggtcggaggtggggttggagaagtcatcgtcgttgccgccgcctttgcccaaggaggcagtcaagattgacaagaagaagacgaagaagaggagtgactacagtatcgaggatattctgaagattcttgatatgagcgaggaggagttggctgtagtgaaggaggagtgggctgaaatggaggcgaaggaaaaggaagaggcaccaaaggtgaaggaaaccatggtggagtgggaggcgagggtcaagaagaggattgaggaggagaacaaagcatatcgagagatgatgcggtcgcaggacgacgatgaatcctcctgggacgctatccagtatcgcaaatcctggaacgctagatggtccggcacccgtggttccttcgaggacaccagtgagtttgttttgttttccattcatcgatcctctgttcctcctgcctttgtagtattaacctagcttcagattgaccaagcatttttatagccattgctgttgtctgttacttcctcaatttcatattatataaattgttgctttgatttttttcctagtcaaatatttttaagtttgaccatatttagagaaaaacatagtggtaatatctccaacacaaaacatacatatcatcaaaatatattaaatgttagttttgacaaaactaatttaatgttcttgattatgtaattttttttataaatttggtcaaatttaaagaactttgactaaaagaaaagtcaaagccttataatatagtatgaaatggaggagtacttcctagtatcatgcaagaattgtttgttttctccatcgacaatagttctaattgctactccatattttgttttctccattcacaacatggttgttaaggctaaaaggcgtcctaaggcgaccccggactgccatagcggtaaggcgtaaggcgaggcgacgccttaggcactccataccaattagatgacaaataaaataatctaatatgatagcaaatcaaagatgcattttaagagcagtacaacacacacacacatatatatatatagatggttgtaataattacttaaccagatatcaatttattaactaaaagagcaccatcttataaatacagagtgagggtgcatgggggaagagcaaacagggtaaatatgtgctaagtactaactacaatacagagtgagggtgcatgggggaagagcaaacagggtaaatatgtgctaagtactaactacaatacagagtgagggtgcatgggggaagagcaaacagggtaaatatgtgctaagtactaactactaatagggagtcagggatgtaggggaggggcaggcaataaaacagagcagtagagggaggagtatagtatatgagatgtagaggagagggaggaaaaccacaacatagcagcaaatgaggaagcagagtagataggatgtagaagaggggggaggaaacaccaaaacaagcagcagaggaaggataagaacagggtagaggaaggagcaaagcaggatcacgtagagcagagaaagaaacagaggaaagtagagggtggaggaaagaggagaaagaagagcgtgcctgcttagtttttgtgtcaatggtgaggaccaggatcatcgcgcaggtgcagaggaccaggatgatggtgcagccacaggatagccgcaggcaacaactgggatcgccgccagggatggagatgtcgcgagggatggatcaccacagcctcagactccagcgaccctctttctgttgttttctccttgatttggtgggatatggcgcgtggggaccttttcaccccaataattggcgcttctgttagttctgtttcgcgcccagggcccatggcgccaatttttttgggcccttcaaccatgccctcaacttcctgtggcgtcgcctttagccattgtagcgcctaaggatgcaatatcgacaccgtagcgacaccttgggcataaagcggacgccataagcaatatggtaaggcgggccagacgccctgactcctggcagcgccttaccgctatagcgacgctatggcgacgccttgacaaccatgattgacaatactgacaattgctactttgttagttgttatgattttataaactgcagttatctgcctgaggtgtgcaatagcgcacttgctagttgtttattgtcactgttgttgttactgcttttattgctactgctgctgcaaaaattgggttaggtcttttaactcatttccaccattttacaactttgtgcagcgagaataccccccatgcgtttcacccacaagcctgcactggattacagtgccgctgccacgcctactctgcaggtcttcttcgtcaaggttgcagtggcaaagggggccttacagtggccacttgatgtgtttggtattgttgccatgcgcgatgttcttgaccgtaatcgcaacattgtcttccaccgcacaagggacaactgccagaccctcactgaagaggtatgtgtccttttctttatgaaacattcagtggcttgcttgtctcctgctgtgctgccatatgctcttcctaattttcataaccgtgcaggcatgagtactgttaattaccatgtagtctttacacccgtagtttagtttctccacaaccattgaattgtgtaacaactttatggaaaagagctcgtcaggcttggtgatcagatatcattgcttcctgaaaattactatggttcacatgcttttagatttacatgccttttgcatgcagtggaaatgtggaatcatgtacatagacagctcaacatatgtgtaaacaagcaatgagaaggcatatgataatgtctgtgtttcatcagagaaatagccatttcctagtacaacacaagtcaggctaaaaaaactaataattaattcaaactctcacacttgtgtttgagtcaactattactgaatcagtacattgaatgaagtttcttaaattaactgttaccttcataatatcatttggataaaatatctagtattaagtgatcctagggaagatggctggttctcttttcaactgtctcacactgtccctacaaattctgggtactttatcatgtacttaccacaatgcattgatatacctctttagtccacaatgcatatattctgaactgttgttctataatgactgtttgatagtttttggtgctttattgttctgaattcagccctaagaatgtttcagcttcgattgcaaggtgttgttctgagtaaagccactttattgactctcgaatattgattgtttgcacataacaaacatcttgttcgttttgccactagtacattgtgctaatatgtttctctcagattttgtgttatgcatgccacatttatgctatgtggtttttgttcgttatactgtgttgtatggattatgctcctcatatatacctcttctttcactccagttttctgattgttcatttgtggttttgcgttaatgcaggaccggaatttggtactggtaggccctacccgtgctgttgcgctgtggatgccggaacctgtgatcatcgatgtggaactaaaagtgaagggcactactgaatctgaggataaaggcttgagcaatctagctgtgccgctcttatgcgatgatacgagttattcgtacactagcaagctaagcacactggagtttagacttggctatattacgtcctctgttgaggccacaatattcatacgagtcattcaggggtcatggcctgatggtttgagtgctcaatttgctgcctttaccactggtttctatggcaagggtatggcctgtcgagacagcaatatgagtattgatgatgagagaattgtcctgcttgattctagaggtgagaaagtagttgttactagtgatggcaatatcaagctttcacggcgtgttgtttctgttgagagtaacacagagctgaaagtttctgtcaaggcatggaaagctgacaacaatgtcgtcgaaaatgagaatgttttcacagcattagaagctggtgtaagctatgctacacttgacattgccttttgtaagctggaaatcagtgttgcctggtcactcatttcgcagtatcctgtttctgccaactcggtactgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0141000, RefSeq:Os08g0141000