Os08g0143500

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Revision as of 12:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0143500| Description = Glycosyl transferase, family 14 protein| Version = NM_001067512.1 GI:115474760 GeneID:4344645| Length = 3251 bp| De...")
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Gene Name

Os08g0143500

Description

Glycosyl transferase, family 14 protein

Version

NM_001067512.1 GI:115474760 GeneID:4344645

Length

3251 bp

Definition

Oryza sativa Japonica Group Os08g0143500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2388732..2391982

Sequence Coding Region

2388925..2389567,2390101..2390176,2390289..2390404,2391304..2391869

Expression

GEO Profiles:Os08g0143500

Genome Context

<gbrowseImage1> name=NC_008401:2388732..2391982 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:2388732..2391982 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaagagctgggggctcgggcggccgtcgggtgaccggcggtggctgctccccttcgccgcgagcctcctcgtctcggcgaccctcttcctcgccgcggcatgcggcctcttctccccgccctctctcgccgacggcgacgacgactccatcctcatcgacgtcgccacctgggacaccgcctccgccgcagaatccgagatcaagaaccgcctcctcgactccaactccgactccgacgacggcgacaacccggacgacgcggcggtgaactcggacgcctcctccgcggatcccccgcggatcgcctacctcctggagggaaccaagggggacggggcgcggatgaggcgggcgctgcaggcgatctaccacccgcggaaccagtacatcctccacctcgatctggaggcgccgccgcgggagcggatcgacctggccatgtacgtcaagggggacgccatgttcagcgaggtcgggaacgtgagggtcatcgccaagggcaacctggtcacctacaaggggccaaccatggtggcctgcacgctgcacgccgtctccatcctcctcaaggagggtctggagtgggactggttcatcaacctcagcgcctccgattaccccctcgtcacgcaggatgatatacttcatgtgttctcttccttgccgagaaatcttaattttatagaacacatgcaactatctggttggaaagtgatttcaagagcaaaacctattgttgtggacccagggctctatctatcaaaaaagttcgatcttaccatgactactgagcggcgagaattgccaacatctttcaagttatatactggttctgcttggataatgctcacaaaaaccttcctcgagtactgcatatggggatgggacaatctcccacggacactccttatgtactatgttaacttcatctcctctccagaaggttatttccacaccgtcatctgcaactcggacgagtttcggggcactgcggttggccatgacctgcactacattgcttgggactaccctccaaagcaacatccaaatatgctctccatgaaggacttcaacaagatggtcaagagcggcgcgccgtttgcacggaagtttcccaaggatgacaaggtcctggacaaaatcgaccgtgagctgctgcaccgctccgaaggccagttcacccccggagcatggtgcgacgggagctctgaaggaggagctgatccatgttcctcaaggggtgaagattcggtattcgagcctagtcccggtgccgagaggttgcgaggcctcatgaagaaggtgctttcatgggattaccgcaatggcagctgctcgtcgctcggttacgatcagacaaaacgagattggtatgttccaaaaggtagaggataa</cdnaseq>

Protein Sequence

<aaseq>MRKSWGLGRPSGDRRWLLPFAASLLVSATLFLAAACGLFSPPSL ADGDDDSILIDVATWDTASAAESEIKNRLLDSNSDSDDGDNPDDAAVNSDASSADPPR IAYLLEGTKGDGARMRRALQAIYHPRNQYILHLDLEAPPRERIDLAMYVKGDAMFSEV GNVRVIAKGNLVTYKGPTMVACTLHAVSILLKEGLEWDWFINLSASDYPLVTQDDILH VFSSLPRNLNFIEHMQLSGWKVISRAKPIVVDPGLYLSKKFDLTMTTERRELPTSFKL YTGSAWIMLTKTFLEYCIWGWDNLPRTLLMYYVNFISSPEGYFHTVICNSDEFRGTAV GHDLHYIAWDYPPKQHPNMLSMKDFNKMVKSGAPFARKFPKDDKVLDKIDRELLHRSE GQFTPGAWCDGSSEGGADPCSSRGEDSVFEPSPGAERLRGLMKKVLSWDYRNGSCSSL GYDQTKRDWYVPKGRG</aaseq>

Gene Sequence

<dnaseqindica>194..836#1370..1445#1558..1673#2573..3138#ctcctagcttcactctctccgctgctgctgctgcgttcggtagctaagcttagcttagcttgcgagctgcgtcgcctagctccgattggatctcgctctcgagctcgagctcgagctcggattccatggcgaattggtgactcggtggcaaggtcccgtctcctggtgtctggaattgggcggcggcggcgggatgaggaagagctgggggctcgggcggccgtcgggtgaccggcggtggctgctccccttcgccgcgagcctcctcgtctcggcgaccctcttcctcgccgcggcatgcggcctcttctccccgccctctctcgccgacggcgacgacgactccatcctcatcgacgtcgccacctgggacaccgcctccgccgcagaatccgagatcaagaaccgcctcctcgactccaactccgactccgacgacggcgacaacccggacgacgcggcggtgaactcggacgcctcctccgcggatcccccgcggatcgcctacctcctggagggaaccaagggggacggggcgcggatgaggcgggcgctgcaggcgatctaccacccgcggaaccagtacatcctccacctcgatctggaggcgccgccgcgggagcggatcgacctggccatgtacgtcaagggggacgccatgttcagcgaggtcgggaacgtgagggtcatcgccaagggcaacctggtcacctacaaggggccaaccatggtggcctgcacgctgcacgccgtctccatcctcctcaaggagggtctggagtgggactggttcatcaacctcagcgcctccgattaccccctcgtcacgcaggatggtcagtgctctgattactctgctgaatgaattttagcttactttgtgtgttgtgcttgttctagaatgtagagatgttttgttaattagctatgaaatgccaccgaatttgcctctaggattgtctacttgatgacaaaggatggtcagtgttcttcaggtcagctgaatttcaattacatattgttgtgtttgttctaggatgtggagatattttcttagctatggagtgccactgaaaagattggaatttaggatttgcctctaggatagcattgttgagggcagcaattagcatctgtgtaactgtaatggttaaattcgttgtgtaagctatagcctatctgatagctcaactagatttctttgcattggcatcagttatgtagagcttgctagctactattagcaagcttcagattcaggaaaatgaaagtgtgctgtaatgaaagctttaatcctcattgaggatattgcaacattcagtggcattgtataagtatttgcatggctaaacgttatttttctctgcagatatacttcatgtgttctcttccttgccgagaaatcttaattttatagaacacatgcaactatctggttggaaagtgtaagtttccttctagtcttcagtattttcaatttttttcacgttatctagttctctctacttttgattatccagattacttgttctgatgctttatgtggttttctcacaggatttcaagagcaaaacctattgttgtggacccagggctctatctatcaaaaaagttcgatcttaccatgactactgagcggcgagaattgccaacatctttcaagttatatactggtgagcatgtttctgatttctatatgtcttacttggcatattagaaagctattatgattctgcccacaagttaacgatgcattcatgcagcgattggcatgggtatggaatctaaatatttatgatactattattccaaactgacctttgaatagtgctggtttgtaagtaattacttcatggtagcagacagtagcgttgaatacttgattgaccaatattgattgcaatagaccatttcttattgttagcattagtgtgtgtcctcttgcttttcactatgtccacatgccctcttatgtttgcgaaaataaataagtagacattatttgcaaaaataaataagtagagggagagagagagaacagaggatttttgttgttgttgttttgagttaaaacagaggatgttggattgaagtatcaatcttgacatcggagttatcaataattttcaaagcaagcccttacagtttagaatgcaccaagatgttttgaaatgagctacttttcctgttgaccacaatatggcttcatttcctgcttgcttccttcctgtcatcattttttgtttgactagatctggtattccgatgaaatggcagatcaaatcttccattagcactgacaaaataagaagtttgatctctctgttcaaaacgcctaggagtgatgcagaataaacaaatgctctatgtgaagtgtaagggcgttatgcagtttttagcaaacatatttctatttcggttgtgaaatcaaaatattgtttttattaattacctgtttatacgagaggcacatcagcatcattctatcttgtacgcgttacatgtttcctgatacaaaacacacaagactcttaaatgtatcttaacatcagagtcgtctttttatcgacaggttctgcttggataatgctcacaaaaaccttcctcgagtactgcatatggggatgggacaatctcccacggacactccttatgtactatgttaacttcatctcctctccagaaggttatttccacaccgtcatctgcaactcggacgagtttcggggcactgcggttggccatgacctgcactacattgcttgggactaccctccaaagcaacatccaaatatgctctccatgaaggacttcaacaagatggtcaagagcggcgcgccgtttgcacggaagtttcccaaggatgacaaggtcctggacaaaatcgaccgtgagctgctgcaccgctccgaaggccagttcacccccggagcatggtgcgacgggagctctgaaggaggagctgatccatgttcctcaaggggtgaagattcggtattcgagcctagtcccggtgccgagaggttgcgaggcctcatgaagaaggtgctttcatgggattaccgcaatggcagctgctcgtcgctcggttacgatcagacaaaacgagattggtatgttccaaaaggtagaggataattcatgttgtcctggtaccttttcttgtaaattcagatagctgaacttgaccccttccattgaaatgaacaaagctgatgaatccaacattctgaccaagaaaaaagatgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0143500, RefSeq:Os08g0143500