Os08g0145600

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Revision as of 12:46, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0145600| Description = Conserved hypothetical protein| Version = NM_001188449.1 GI:297726028 GeneID:9268118| Length = 5161 bp| Definition ...")
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Gene Name

Os08g0145600

Description

Conserved hypothetical protein

Version

NM_001188449.1 GI:297726028 GeneID:9268118

Length

5161 bp

Definition

Oryza sativa Japonica Group Os08g0145600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2575590..2580750

Sequence Coding Region

2575758..2575766,2576156..2576233,2576811..2577035

Expression

GEO Profiles:Os08g0145600

Genome Context

<gbrowseImage1> name=NC_008401:2575590..2580750 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:2575590..2580750 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgtctcacccaggccagtgcgggcgcgatggccgctgtcgaggttggaaatggcgtgggtagacaggggcacagggcacggcgttgcaaatagaggtcaggggcgagacggccgagaagatgtggtgctccaatccaatcattacgccggccaccacgccgtcatcaactccgctccgtcgcagcccggcgtggacgcgccgcctctgccgagcccctcggttgaagttcataatcttgttgactcatttagggaaaacattactttccctgtacaattctctgatgcttctaagtgggttgattga</cdnaseq>

Protein Sequence

<aaseq>MGVSPRPVRARWPLSRLEMAWVDRGTGHGVANRGQGRDGREDVV LQSNHYAGHHAVINSAPSQPGVDAPPLPSPSVEVHNLVDSFRENITFPVQFSDASKWV D</aaseq>

Gene Sequence

<dnaseqindica>4985..4993#4518..4595#3716..3940#actatgatgttgctcttttagaggtcatgggagacttccagttgcaggtcccttcttttggctcgagtacaacctatggtcaggacgtatttgcattggctagggatgaaaacatgtgcttaatggttaggcatggaaaaatctcatggctggaatgtcccatgttattgaacaaccactatatgtttctgagttgtgatattcctgaggtattgatgcattattatgttatcattttaatgcattgttatttttcccatttaattttatggcattgttattttcccatttaattttatggtatctctctaatgcagggtggttcaggagggccagtgattgaccatgatggtaatatcattgggattgtatttgacaataacccgggtccggtagtaacctctatcactacaatcagaacttgcgttgagatgtggcatcagtttaggtttgttttcctttttttttttctgttgtcatctaaataaaaatttcatgggcagttattattgttaacaacacattttcaccttttgccgctctgtcaacatcccatcagttaagttgcactatttcgagcactagaaaatgtttgatgatgtttctggtctctctagtaaagctcatcatggcaatcatttgagcgtgatcctgcttgctcattggtcattgcaatgtcttgcgggcatgaattatgaaatacaggaatggttgtggcagagtatgtctagcatggtggaatgctcacggcacaagagtgtatcaattatgtgattttgatgttgtttgaatgctagcaatctttgactgctaggagcatgtctctcttaattactttgtgttctagccatcatgggtgattgattcattttttaacctgttagttcatagtgaatggtattatggataaagggaggattgggtggtatatatatttacaagatgcaacaaatttgatggtatggaggcaattaccccattcctacactgaaaaaaaaaagaattgctggtaggagtatggaacagacaaaatacatccttatagcaatgtgtcttttaatccaggatggtgtggtactgttttcttatggagcagttgtacatggattagtcaaacaaatattgtgtagtttatcttctggtactgatgcactaaatccaactcatttttagccgtgttgctcgccccatacttggcatgcaattgaaggcggtggaactactggatgtctctaaactggaggaactctgtcttgacaacaatatcaccagcggtttcattgtgaatctggtataacattattctgtccagatatttttctcgtagtatttgactcttttggtttcataggtgaaagttgattctattgcggagaggcttggtattagacgaggggatgtgattgtttttcaggatagttgttgttctactttacctcaggtgataaaaagtctagtctttattgatcaatttactacaaatacagtattgtttatatgtaattatattttgtgaacagttagaagactaccttctttctcttggctggggatacctgcaggggaaaagtttgacagtagatctcaaggtatgttaaaagctatatgtgctaaaacaaaaaaatatgttgtttgtttctgtaatactagtagcatgcccgtgctaacgctacggtaaccaagaagatgcatgtgcacatacgcaaatatgaattttaaccattatgacaaaaggagaaagaaacaaattgtctttatacaaaatcacatcgtgtacccatcagctgtatttatctttctaaataacccaaataattgatattccactcactgaaattgcagcattacagtaatgagatgtcaattttaacctaacctatagaattacataaccctgccactttacaacacatcggcaaaaagggaaaacatcaatggcttgagacaccatatgatttcacctatagaagttcgcatatggcaatcaagcattagggggaacttgtaagtactaaaatttccacaacaaccacttcactttcaaattttcgtctgttcttgtcagaagtttgtgggtgttgttttttcacatttctcagcatgtttgatctcagaagtttggcgctgcctgctcgaatccttcttaggcttttgtactcgctgaaacatttagcaactatgatcagatttaaatgccataaggagtagcaatttcatctaagaaaatattttgcacatgagaaataaaaaatataaaaggattaggatgaacacctgagcaagagctacagttcgatcatgtcgttcagcgcgtatcttgctcttcctccaacaccatatattttcttcgcttgagcatgtctgtacaagaaacaaaccaaaattaaggcatgtgaggtctttttcaccagacaacaaccatcgtttttcttctgatgcatccattttatgcatcaacagggatcttctccctcaaacatcaaaggaggggaaattaactttcagcttctactcacctttgctttaaaatgtaccctgaccatctcctcatttaagaatatgattataggacacatatacggatttgcacttcagcatgtagttattgaaatcaacctaaaaaaacatcatccatgtttgccgcatctttggttgaatgagctttaccacttaggctctcttaacaggcaaatttatctcatgatcttcttcatgtcttgactgatgtgctcatcactatctgattgcaatcatatgatcatattttagaggctgatcttgctgcaacatttcaaaaataattcataatacataatttcaatatgacacattccataggatcttaagaaatcaacagctgagatttggtacttggtgccttctcaagtactataaaattcctcttaaaaaagcttcagtatcgttggatttcctgtagaggaaaaatacagttaatgaatagttcattgatcatgtaaatttgaattatgttgatattgaaagaaaagggatgacacaatacatctcattccatacaccccaaaatcacagtagctagcctggaatcaaactcgaatagacaaaatgtaaaaccgtgtcgattggttaatatgatcttatgggaccatgagcatgtttgcccagattatggaccaaagcatcgattgcctaaaaaatttgtatccttcattattaactttttctgtcgttgcatgtggttacagttaaatcaataaataaagtgtgtatgccaaagagatttaacaatcccaccataattaatttcatttacatgtgcaaacaaacttgaagagaatgagctcaaataaatctgtttttgttgaataaaaactgttttaacattctaaaaccagattatgcaagtgctcatatcaattcatcaattcagaaatatgatccatataaaaatgatgactcctcactcctatatttgtcctctggacatgtatccaatctcttcaacactcctaatctggttgtatacaatctcttcaacagtcctaatctggaagcatcaagggagaagacgctaccatcaaaccgaattagagagagagaagaaagtgagcatgaaccataaacaagtgtgaatgattcaagtaaacaagatatattcatccaccagatacttccatcacattgcgcatgtgcatatcaagaccaagaggtacctcattgcttgtggcctgctggtatgggtgtctcacccaggccagtgcgggcgcgatggccgctgtcgaggttggaaatggcgtgggtagacaggggcacagggcacggcgttgcaaatagaggtcaggggcgagacggccgagaagatgtggtgctccaatccaatcattacgccggccaccacgccgtcatcaactccgctccgtcgcagcccggcgtggacgcgccgcctctgccgagcccctcggtgagcaccacccggcttcgtccaccgtggtctcgccgcgcatgtcgcctgctcttgagtatggtctgtggccaggggtatgatagggtagaggcacgtcggggatcggtggcggcaaggagcagatcgcatcgacgggaatcctggacgacgacggatgcgacgacggcgatggggatcgggttgagggcgagccggcggcggggatcggtggcggcgagaggattgatgcgacgacggggatcggcggcagtcgagggcggcagcgacgacggcgtgaaagggagcgattagggttggggaggggaggggcggcggcgcgtgagagcgtttgagacggagcggagaggagcatgcaatcgagggatcgatcgatctggaccgcgagggaggtgggaggtgggaggtgggagcgatctggaccattgggatttcaccgggatgatctcgaccgttgagtgaggaatgaaagaatgagtgaatgagtgaatgagtaaaaccatttgttgaactatagggtagattgaaacgtaaaagaaaaaaaggttgaactcctattttgtttttttctatgcaggttgaagttcataatcttgttgactcatttagggaaaacattactttccctgtacaattctctgatgcttctaagtgggtaagtacttgagctattgtagtataatcccttgccttgctattttttattcccaatttttatcctcaacccgtgtggttaattagttgcatcataggcacacgaaagttatgcatgcctggtaagttttgtggtatggctttatatagttgtaaacattattagttttattatcagcagatggagctagatctataattcagagtataataatgtgatatctaagcagataatcaaacaaccatttaatttgtatgcatttatttttggcatagctagctggatgactcaatctaagaactatttgatttggatattgcaaggcatttacttattggggatcaaaaaaatattttgtggaactgacaaattaatgttttggaatgtaggttgattgagggtgacttaaaaaggtgctgcattgtcacctagtaatatgactgaccatggaggatatgtgacattatcgaagaatgtgcaatccttgtttaatgaaatggcagtcttctaaacctatatgttgacaagctactagcaatagctctatatatgacacaaaatttgac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0145600, RefSeq:Os08g0145600