Os08g0150500

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Revision as of 12:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0150500| Description = Cyclin-like F-box domain containing protein| Version = NM_001067527.1 GI:115474790 GeneID:4344660| Length = 2680 bp|...")
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Gene Name

Os08g0150500

Description

Cyclin-like F-box domain containing protein

Version

NM_001067527.1 GI:115474790 GeneID:4344660

Length

2680 bp

Definition

Oryza sativa Japonica Group Os08g0150500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2903619..2906298

Sequence Coding Region

2903619..2903822,2903895..2904077,2904164..2905049,2905988..2906298

Expression

GEO Profiles:Os08g0150500

Genome Context

<gbrowseImage1> name=NC_008401:2903619..2906298 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:2903619..2906298 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgctccgcgacctccactctcacctctcgccacggccaaggccggttaactgggaccctggtggccctgcgtccttcagcgtgaggctgttccgcctcagcttgagctccggctcgccgcaagcgccgtcgagggaccacctccgcgtggaccatggcgtcacctccgcgtccgcgcgcggctctgtcgcttccgtggccacgcgtgactcctctgctgtcgacgttgctacctcgtacggctcgccgccgccgccgccacgtgcgactccgccggtcgcgcgcagctacgtcgcctccccgcccagggctattgttcaccacgtgtttgagtgcatgtctctgagactgatgagaatgtccaacaagtgtatgagaccaacagcactagaggccagcacctatgactttatcagcagcctccctgatgagttgctccaacatatcctctctttcatgactgcaagggaggctgtacagacatgcgtgctgtccagtaggtggcgccatatttggaaatctttgcagtgcctcaacatcaaaggatctgaattcaccagcgaggcggcatatgtgaatttcatggacaatttagtactgcgccgtggttgcgtgcctctagatagccttctcttgtgtaactcatatggtagagtttccttgaaccatgacagagctaacctgtggtttggctatgctttgaggagcaatgtccgtgagattaatatccaagagaagcattttgaatattctaatctagaccattcttccttcatatcgtcccatctaaaaatactctgcctcaattatgtttccatcagtgacctcttcattgagaatctcttttctggctgtccagcattacaagatcttgtgatggtagactgttgcgtatatgcaaccagattttcctcttcctctttgaagaatttaacctttacctcacatagccctgacaatggtgatcttgttcacgacgatttcaaagatcttgtgatagataccccgagccttgtttccctccacctggagtaccttccctttttagctccttgccttttgaatgcatcgtccgtggaaaaagcttactttcgccttgatgatatgtccttcccatgttttcatatgaaatacaacatcctcagtgctttgtcaaatgttaaaaatctgaagttgctaataggacaattcaatgatgatgcttttcagttaatgcaaaatgaggtactaaaaagggatctctggaggtgccggacattcaacagcctaaaaaaactgtctgtcagtgattggtgtgtggatggagagttgcacactttgatccacttgcttcgatgctcaccaatcttggagaaacttactctgcatcttggagtgattggaggtttggcttgggaacagtggatgagttacccacaatcagagatgccagacatgtcgtttatttgtgagcatcttaagaaggtcaaaatcacctgtgcgaacgacgacaaaagggtgcccgctatagttaatgctatacttgtcaatgccaactctctgccagaaattgttatcaaaccatacacgcgtttggactag</cdnaseq>

Protein Sequence

<aaseq>MPLRDLHSHLSPRPRPVNWDPGGPASFSVRLFRLSLSSGSPQAP SRDHLRVDHGVTSASARGSVASVATRDSSAVDVATSYGSPPPPPRATPPVARSYVASP PRAIVHHVFECMSLRLMRMSNKCMRPTALEASTYDFISSLPDELLQHILSFMTAREAV QTCVLSSRWRHIWKSLQCLNIKGSEFTSEAAYVNFMDNLVLRRGCVPLDSLLLCNSYG RVSLNHDRANLWFGYALRSNVREINIQEKHFEYSNLDHSSFISSHLKILCLNYVSISD LFIENLFSGCPALQDLVMVDCCVYATRFSSSSLKNLTFTSHSPDNGDLVHDDFKDLVI DTPSLVSLHLEYLPFLAPCLLNASSVEKAYFRLDDMSFPCFHMKYNILSALSNVKNLK LLIGQFNDDAFQLMQNEVLKRDLWRCRTFNSLKKLSVSDWCVDGELHTLIHLLRCSPI LEKLTLHLGVIGGLAWEQWMSYPQSEMPDMSFICEHLKKVKITCANDDKRVPAIVNAI LVNANSLPEIVIKPYTRLD</aaseq>

Gene Sequence

<dnaseqindica>2477..2680#2222..2404#1250..2135#1..311#atgccgctccgcgacctccactctcacctctcgccacggccaaggccggttaactgggaccctggtggccctgcgtccttcagcgtgaggctgttccgcctcagcttgagctccggctcgccgcaagcgccgtcgagggaccacctccgcgtggaccatggcgtcacctccgcgtccgcgcgcggctctgtcgcttccgtggccacgcgtgactcctctgctgtcgacgttgctacctcgtacggctcgccgccgccgccgccacgtgcgactccgccggtcgcgcgcagctacgtcgcctccccgcccaggtgtgacacggcaaacccctccacgcgacacggtggccagaccaccgcagctacttgctggcctccgccaaccaatgcagtgcggagccacctccgcgtcggccgcagccgagtccgcttatgtccgcctgcgcgagctcctagcggcgccgccatgagcggcaaccggcaccctccgctggcaccacgcgactctccgcagccttcgctcggtagcacgtgtggatagatgcatgcagtgcatggccctattcacgtggcaaggtgtaggagcgtggcaacctgcagccatgcctgccttcggggacctatatgatacgcaaaacaagttcgggaatctaaaaatgcattttgagagttcagagatctagatgacacatccgcacaagtttagagaccgctggtgcacttcactcaaaaaaaacttcatgtgaggttgagcctgatacagtacttactagtctacctttcagggtgttagcacaagaaaagtagtgtcttgtgaaacgggtctaggaaattggtgtctttctgtgataaatttaatcatgctttacttatcgaaataaatggttgtagagttggaaattggttgtagagattgagaagggttacgagttgtgacaggaaagaaatgtgatcctattacttatcgaaaccaggcacagacaagatggctcccttgttggtctaccttgtgggatttagttgaggtgccataagtcccatgatatatcctagactaaggatactggttttgtcaaatagtaactgggaatccaatggattcttctctgaaaaaaaaaatgattacctcatggttttgtccattatgtctgttatattcgcgtagcaatcattactatattggattcaatagctacattttccaaagtcgcttacactttcactaacatgtatatttctggtttgtgtagggctattgttcaccacgtgtttgagtgcatgtctctgagactgatgagaatgtccaacaagtgtatgagaccaacagcactagaggccagcacctatgactttatcagcagcctccctgatgagttgctccaacatatcctctctttcatgactgcaagggaggctgtacagacatgcgtgctgtccagtaggtggcgccatatttggaaatctttgcagtgcctcaacatcaaaggatctgaattcaccagcgaggcggcatatgtgaatttcatggacaatttagtactgcgccgtggttgcgtgcctctagatagccttctcttgtgtaactcatatggtagagtttccttgaaccatgacagagctaacctgtggtttggctatgctttgaggagcaatgtccgtgagattaatatccaagagaagcattttgaatattctaatctagaccattcttccttcatatcgtcccatctaaaaatactctgcctcaattatgtttccatcagtgacctcttcattgagaatctcttttctggctgtccagcattacaagatcttgtgatggtagactgttgcgtatatgcaaccagattttcctcttcctctttgaagaatttaacctttacctcacatagccctgacaatggtgatcttgttcacgacgatttcaaagatcttgtgatagataccccgagccttgtttccctccacctggagtaccttccctttttagctccttgccttttgaatgcatcgtccgtggaaaaagcttactttcgccttgatgatatgtccttcccatgttttcatatgaaatacaacatcctcagtgctttgtcaaatgttaaaaatctgaagttgctaataggacaattcaatgtatgatctgagctctggcactgccatgatttcatctctcttttctttttctattttatagctgatgtctctgtatgctattgcaggatgatgcttttcagttaatgcaaaatgaggtactaaaaagggatctctggaggtgccggacattcaacagcctaaaaaaactgtctgtcagtgattggtgtgtggatggagagttgcacactttgatccacttgcttcgatgctcaccaatcttggagaaacttactctgcatcttggagtggtattgaaatggattttttttttttttgctttgtaatcaccacactgatacgttttcacttcttctcaccagattggaggtttggcttgggaacagtggatgagttacccacaatcagagatgccagacatgtcgtttatttgtgagcatcttaagaaggtcaaaatcacctgtgcgaacgacgacaaaagggtgcccgctatagttaatgctatacttgtcaatgccaactctctgccagaaattgttatcaaaccatacacgcgtttggactag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0150500, RefSeq:Os08g0150500