Os08g0151000

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Revision as of 12:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0151000| Description = Similar to MCB1 protein| Version = NM_001067531.2 GI:297607974 GeneID:4344664| Length = 5314 bp| Definition = Oryza...")
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Gene Name

Os08g0151000

Description

Similar to MCB1 protein

Version

NM_001067531.2 GI:297607974 GeneID:4344664

Length

5314 bp

Definition

Oryza sativa Japonica Group Os08g0151000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2933789..2939102

Sequence Coding Region

2936858..2937466,2938719..2938997

Expression

GEO Profiles:Os08g0151000

Genome Context

<gbrowseImage1> name=NC_008401:2933789..2939102 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:2933789..2939102 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atttatttccactgtgcagctgtcccttggactgaagaagagcaccgaacatttcttgctggtcttgaaaagctaggaaagggggactggaggggtatatctaagaactttgttactaccaggactccaactcaagtggctagtcatgctcagaaatattttcttagacaaactaatccaaacaagaagaagcgcagatcaagcctttttgatatgatggcaactgatatggtattgtaccttctgctaacatacagtactctgcattggcatctgaacattattatgtttctaatcaatccttggtacacctgtgaactgcagtcaccagcaccaaactgccctgtcttgccaccatcaatgggaaaattacatgatatggtagctatgactaaacaactccagaacagcagtttggtaagttcatttgatatccattttaacgtgctagtttcagtgctgagatatatggcaacctattttcaggaaggagtctcatcttcaagcacagttaatctagcaccacaagttgcaagagatcttcctcccccaattccatcttttaaagcaacaaatgtagattcaagtctcagcaaaatgaaccacatggacggtttcttgagggcgcccatgctgttcagaccaattccaagaatcgctgaaggggcatcttcatcgactcctgcaactgcaagcatagctgatctggaatttcaagctaacctgactgcatgttctaatgcattattcgcgagtccgagaagaaagccaaagaaggcagatcctccagcagagaaggatctggatctgacagttgccccaccctcccaacaaaccagggccagtatttcttcccagaacgcagtaggcgtaattcaagtcgtatag</cdnaseq>

Protein Sequence

<aaseq>IYFHCAAVPWTEEEHRTFLAGLEKLGKGDWRGISKNFVTTRTPT QVASHAQKYFLRQTNPNKKKRRSSLFDMMATDMVLYLLLTYSTLHWHLNIIMFLINPW YTCELQSPAPNCPVLPPSMGKLHDMVAMTKQLQNSSLVSSFDIHFNVLVSVLRYMATY FQEGVSSSSTVNLAPQVARDLPPPIPSFKATNVDSSLSKMNHMDGFLRAPMLFRPIPR IAEGASSSTPATASIADLEFQANLTACSNALFASPRRKPKKADPPAEKDLDLTVAPPS QQTRASISSQNAVGVIQVV</aaseq>

Gene Sequence

<dnaseqindica>3070..3678#4931..5209#gacaccccgccttctccccaataaaaacgccaccgcccaaccccgtcggagcggcggccgtcgggatatgcctcaagattcgcgccccgccgcgatgcgcctcttcggcgtcaccatctcgccgccgccgccgccgccggagccggagccggagccggatccgtccgacccccgggatccgagcccgcggccggcgagggaggacgcgatgcgcaagtgcaagagcatgggcaacctcgccgccgccgccgccgcctcctccgccgcagccggcggcggcggcgccggggacgccgggggatcgggcgacgggtacctctccgacggtgggctgctgctgtcctccggcaagcggcggcgcgcgcaggagaggaagaaaggtgtgcctcttttttttcttttttttttaatctccatttcgtttagcttaaattttttctcctttggttaatagaaatgtagaaataaggaaagatctggtgatgaatggtctctttgctcgctacaaaaaaaaatgcttggattggagaggacaaagccatggcctttttagctattttttttagttttacctgagttgtctggacgcagaaatgttgttactttaatatggagggttattaaagattgcattcgtctgtagcagaatccaatgatttaggtaatgagatgattaggtttctgatgccacgaatgcgttgcacatcgaatgaggaaagtctaatatccttttgtttgtgcttgtgctgtagcttagcttgtatgtaaatgtttgcattcatttcactgttatttgcacattagttcattggatatgtaatgcttgaaccttctttgctatgtgcaagagttttacaagctattagtttaggtcgattgaggttgtagagttgtggtacaaatgtacgatagatgcgtttgttcgttgaatgtatcaggctttcttgctttgttttgtgctagtgctggcatatagcctacaagtgcttttctttgcatgttagttgattgaagatcctatttttgctacagttgtacttatagattggtaaatagtatccactagtcagttgtttgaactttgaatagtgattcttttggacttgatccatgatgcatgctggtgggtttgttttcttccatatcagattttgcgttggcagtatagtctgatgggtgactgggaaatatataactgaccggataatccctggttggaatttgtgtttgtattggtgttgcctggtttacattaatttactcataaggatcaggtgagtttactctttagtcatgcaaggaggagcttgattaagacagttatcacttattacactgtgtttgatatacatcagggtgcattaaggcagttgaaggcctcctagtatttgcattgtcacatccctaacgaaggacaagctgttgatatgttggactttgttctgaatattgtaaaagtataggatggattctattcatattgtgcttggaaaagacaagctctttgtcttttttagggaaagcaaatgatgtgtaatgcgttcctgctgaagtgtaagtgcctttcagtgcctggtggctggttggttcatatacagctagccagacaaattaatcaaatttccatggatgctgttccatttgtcttcatgcacataactgttctgttagttggatcctgtgttcttatatcgcacacacaagcagccctatttcgttccatcctgagtaatgctgctttctaactttatcataatgcatcctaggtttaggttacaggaattcttttaggactttatttttctcataattgcacccgctggtgaaaattattgacttcctgcagttgttacatttgatcaattatattaatctgttagtctgattcatcatagatgtttgttttggagtaatgatgctatatgcattccaatggcttctggcttccactaaatatggtgcctaatgtttgttaaaatggggaaaaaaatagcctacccgttctttgtttatgatatgtgaacatgatttttattttagttggttatcattttagagtattgctccatgcttcagagtttttttttgggttggggggggggggagttgggcctttgctcagtaaacttaaacaaatgacaaagtaactcatgcgacctatattaactgtataaaaattttattaagtcaaaggtaacttctatgtagatgctacagtttgtcaaaaaatggtctagagttgtttgaccaccttttgtattctaataaaagttacatagtagatgatttcagatatagtttaaacaaacttgcaatgatgctttggaagtgttggttgttctaagtagttaggtagtactagtcagtgccttgtcgattacccaggcagtcactgcatagggggctataaagtgatcaggcactaggctggacacaccctagcctatatacacttagacatatccctgcactgaaaccggtttaattgtagaactgtggaagtacttaaagacctggatgatgagaaattgctctctgcaagtactactttacatattgatacatttggatttggtaaggctataagcacacggagaggatgtcccagttcccactatggcttggttactgaaatttatttgtagaagcattgatatctcccttactgcattggtttctcttgatattttcactggctattatgctaacttccaccttataagtttttttttttggaaaaagtccacatttgatccttcattcctcaactacaaaaccatttattgttggttcttcaattttcaaaactgtgcagatatcatccctgggcccaaattttccatgaaatccctctcatcttatatttaaagcatgtcaacctgataatgtcttacacttctttttggacaatactagcattactttctaaagcatttgcaaagctacctcaagaaagtttttatgatagtaagatgaaaagaaataggatgtgcatccattttcttgctacagttattaagcgcatatcacctttctgtatctattgcaattcagtcggtgagttaatagatttatttccactgtgcagctgtcccttggactgaagaagagcaccgaacatttcttgctggtcttgaaaagctaggaaagggggactggaggggtatatctaagaactttgttactaccaggactccaactcaagtggctagtcatgctcagaaatattttcttagacaaactaatccaaacaagaagaagcgcagatcaagcctttttgatatgatggcaactgatatggtattgtaccttctgctaacatacagtactctgcattggcatctgaacattattatgtttctaatcaatccttggtacacctgtgaactgcagtcaccagcaccaaactgccctgtcttgccaccatcaatgggaaaattacatgatatggtagctatgactaaacaactccagaacagcagtttggtaagttcatttgatatccattttaacgtgctagtttcagtgctgagatatatggcaacctattttcaggaaggagtctcatcttcaagcacagttaatctagcaccacaagttgcaagagatcttcctcccccaattccatcttttaaagcaacaaatgtagattcaagtctcagcaaaatgaaccacatggtaatgctactggttttcatttttgacatattagatatcagatatctcatactttaagaggtggtgatttctcataaagagtttggatgtttttcatttgaaccattttctattggtctaggcattgctccgcattgatgatcgccaacttttaaataccatattgcaactataatgtgggcatatttaccaaccaaaagccacacacatcagggaaatgaaaataggcacagctatttcatagctggtaaaatgatgagttgtgggaaattgaaattgcatgggcatatttgctttcagtgcttccaatctccttcctatgaaggaccatccagatcatcaaagatagttcaaagactgataatattgggttcaaaattgttaatcaacatactgaatttcagtccaaactggaatttgtcatgagggaaaaaatattcttttgaaaaataatactcggtgaaggtaaataaagaagtaaaagcgattgttgagtgaacttctctgttctgctatgtgtagtaaaacctgcaattttatgggcactagatcactctgatccttaccttcttaattttgtttttgtagaatcttttgcgataatttggatggttccttatcagagtgtcggagcatctaataggtaggctgcactggataaacacacctttctgcacttttaatgtaaacccaacaagtaacaactgcatatccaaaattatgttcttaaactgtttctatgcactattggtactgttccaaaaacgacggtacaattgtttccataatagtggtcccaagcaccaacacaaatattctgtggatttgggagttggtacttggtagttactattcatgttgaagcatatgtgcaaaaatgaaaattatgaaaagacaccgtaacttgtaatgtcaaagttatttggtgccctgagttccagcaatattagggaattagttttgatcagaacaactatcttgttggtaaccgcctgagaacatcatgttatattagattattagttgatgtactttacttggtagttgcctagttggtagtggtactgtattgattacaagtactgttgtttagggtgccaacgatcagtatgagagcctgagcatttgttccttgaactcattatgaaacacacagatttgttcattttctacattttaggagctacatttgtaatacaatgagccattactatctatacttatggattaattaaccttcattcctttccaggacggtttcttgagggcgcccatgctgttcagaccaattccaagaatcgctgaaggggcatcttcatcgactcctgcaactgcaagcatagctgatctggaatttcaagctaacctgactgcatgttctaatgcattattcgcgagtccgagaagaaagccaaagaaggcagatcctccagcagagaaggatctggatctgacagttgccccaccctcccaacaaaccagggccagtatttcttcccagaacgcagtaggcgtaattcaagtcgtatagactgataattttttttggggagttttaactatgttgttgaatgtttacaaaaataaacattaacattatattagcgatacaccaataaaagaaggaattaaagat</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0151000, RefSeq:Os08g0151000