Os08g0151700

From RiceWiki
Revision as of 12:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0151700| Description = Zinc finger, RING-type domain containing protein| Version = NM_001067536.1 GI:115474808 GeneID:4344669| Length = 381...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0151700

Description

Zinc finger, RING-type domain containing protein

Version

NM_001067536.1 GI:115474808 GeneID:4344669

Length

3814 bp

Definition

Oryza sativa Japonica Group Os08g0151700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2971604..2975417

Sequence Coding Region

2971709..2971824,2971908..2972194,2972294..2972397,2972474..2972556,2972653..2972769
,2973432..2973534,2973606..2974275,2974586..2974773,2974876..2974968

Expression

GEO Profiles:Os08g0151700

Genome Context

<gbrowseImage1> name=NC_008401:2971604..2975417 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:2971604..2975417 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccggcgccgccgcatggccggtctgcaccatctgctacgaggacctccgcccgctctccgaccagcacctccactgcctccccgcctgcggccacgtcttccacgccctctgtttggagcaatggctggagtactgcccgggcgggaagaagaagctcacctgccccatctgcaagcagccatgcggcgccgcccacccaccgacccgcctcttcttccaatccaccggcgcgtgccccacgcagaccgcctcctcctccccctcgcggcacgagcccaccgatggcggcgccgaccgggatgagctcgccgccgaggtcgcgcggctggagcagaaggccgcctccctcggcagggtgctcgacgagcagcgcgacgggatccagaagctcaacgccgaggttgctatgtggagggagaaggcggccgaggcggaggtgatgaaggaatcggtcaggagggagaaagaatgtgttcagcatctgctcaatgcgaaaacagaggaattgtcaaggaagtcatcagaatgtggcaggttgcaggagaagggcctctcattggcgaaggaacttgcagcattgaagctgtcgacagatatgaaccttcaggaggaagagatccttaagttggcatcacttggtaaccatggaaatgctgcgaatgcggttgatgttttgacgagatctcttgctcttcggaacaagagctacaaagaattgatgatccaatgcaatgttctgggaagatcagaatctcgttcccagcagaggtttgagaaggcaaaagaactcattaagaagttaaaggcaagagtacaagaccttgagaaggaacaagaagaaaaagaaaatggtgtgattagggacctgaggtctgcaaagaaatttaaagctgaccagacaaattcaggaaataccacagttaataatggtttctcgggtcttgctgctggatgtggagattatccgatgaagctcgatgaagtggtgcaggatccatgcgacaagcctgggccatcacctgaagctaaaaatgacctgaatataaaagacaaaatggacgacaagcatgcggatgtgattgacttagatgctgatgattctgtcttccaacatgaacacaagaaaggactttctgccaaaccatttgggaacgatggtaacgatttggatttcaaaagtcggtctagtcttcaagaacattataggaaggaatccataacatgcaagacatatgtagcagaggaaaattcctttctaaaaccttccatggtaactgaaagatcagcacttcaggagagctttaccacaaacaaacttcaaagctttcaagaaactcctgttctaagaagtatgaaagctacaacttcgacatgggagaaagaaacactgacgattgatggcatctctaaacaagctactagaatggctcctggcactggaccccagcaggttcacaatttcaattctctttcagatgacttccaaataccaattagaaatcttggtggagagggaacaggaaaaagcgtcggcaaatggtgcaagggcgtagctacccctggatctctcaacacaaatgcaaataaaaggaatctgatcgccgtagggccagacggacgtgggggaaaggtcaaaattttgagagatcttggcaaattccaagatagcaagactcaagcactatggcctaaggcacagaaggttggaagcagaggtgggcaatctcagatagatcatttctttgggaagagatga</cdnaseq>

Protein Sequence

<aaseq>MTGAAAWPVCTICYEDLRPLSDQHLHCLPACGHVFHALCLEQWL EYCPGGKKKLTCPICKQPCGAAHPPTRLFFQSTGACPTQTASSSPSRHEPTDGGADRD ELAAEVARLEQKAASLGRVLDEQRDGIQKLNAEVAMWREKAAEAEVMKESVRREKECV QHLLNAKTEELSRKSSECGRLQEKGLSLAKELAALKLSTDMNLQEEEILKLASLGNHG NAANAVDVLTRSLALRNKSYKELMIQCNVLGRSESRSQQRFEKAKELIKKLKARVQDL EKEQEEKENGVIRDLRSAKKFKADQTNSGNTTVNNGFSGLAAGCGDYPMKLDEVVQDP CDKPGPSPEAKNDLNIKDKMDDKHADVIDLDADDSVFQHEHKKGLSAKPFGNDGNDLD FKSRSSLQEHYRKESITCKTYVAEENSFLKPSMVTERSALQESFTTNKLQSFQETPVL RSMKATTSTWEKETLTIDGISKQATRMAPGTGPQQVHNFNSLSDDFQIPIRNLGGEGT GKSVGKWCKGVATPGSLNTNANKRNLIAVGPDGRGGKVKILRDLGKFQDSKTQALWPK AQKVGSRGGQSQIDHFFGKR</aaseq>

Gene Sequence

<dnaseqindica>106..221#305..591#691..794#871..953#1050..1166#1829..1931#2003..2672#2983..3170#3273..3365#ggcttcttttcccctcctctcccaaatccaaccacaagaagaggaggaggaggccaccgttcgcatccgccggatgccaccgccgccgacgacgacgacgccgccatgaccggcgccgccgcatggccggtctgcaccatctgctacgaggacctccgcccgctctccgaccagcacctccactgcctccccgcctgcggccacgtcttccacgccctctggttcgtcctccacctcgctcctcctcctcttcgaatcgatccggcaatggcggtctggatgattcttcttgaatcttgagcagtttggagcaatggctggagtactgcccgggcgggaagaagaagctcacctgccccatctgcaagcagccatgcggcgccgcccacccaccgacccgcctcttcttccaatccaccggcgcgtgccccacgcagaccgcctcctcctccccctcgcggcacgagcccaccgatggcggcgccgaccgggatgagctcgccgccgaggtcgcgcggctggagcagaaggccgcctccctcggcagggtgctcgacgagcagcgcgacgggatccagaagctcaacgccgaggcgagcgctgctgctggccccccgaatttgggtggatcttgtgttgggtttgcgtctcgctttggatttctaatggtttcttggtgatttttggttcaggttgctatgtggagggagaaggcggccgaggcggaggtgatgaaggaatcggtcaggagggagaaagaatgtgttcagcatctgctcaatgcgaaaacagaggtaaaatcgatcgattcagcacctgatgtttgatggattagtggattgatgaaattgcatttgtacttcatgacaggaattgtcaaggaagtcatcagaatgtggcaggttgcaggagaagggcctctcattggcgaaggaacttgcagcattgaagctgtatgtttgttcatttccacctgaaagatgcaaatgtttgtgtttgataagtggaatgtatttagtttttagagtataatttgttttgtccattaggtcgacagatatgaaccttcaggaggaagagatccttaagttggcatcacttggtaaccatggaaatgctgcgaatgcggttgatgttttgacgagatctcttgctcttcggaacaagtaaaatttcctctttattatacttatcttgaagcggtgtgtttatggttaattgcatgcctttaagcataattaactgatgatagggtttattaaccacttatgtacttgttatgctggtaatagttgaccaataactgaaagcatgctatctgctttagctttctgtgtcgaatagtatatgcaaatggatgcagagctttgtactttatcgaagtgtgaggttatcaaacataaattgtagtgagtgcttgtgttacaagatttatgggggttttatggtcaattttgagaatgaaataaacattcttgataagcgaaatagtttggattgtatattgattagtgatggtaataggctaatagcacttacagaatgtactgagggatgcagatgatttttttcctagtacaattagatgcacatactcaacacacaatacaatgcgcacacataggcatgcaggttatatacaggccaaagaacatacttaacttcattgattgttcaaccaagctgttctctatgccaattggatgtgtttaacactagtgaaaattttactgaacatgatgaagcttaataaggctactgctccatgattggaatgcttcagtaacacgttattttccctctaaaaaaagtaacacggtctttttaggagctacaaagaattgatgatccaatgcaatgttctgggaagatcagaatctcgttcccagcagaggtttgagaaggcaaaagaactcattaagaagttaaaggtaagtccatacggggggtatctttttgctggatgtgtattttcagtgcagataaccctttttaactacaggcaagagtacaagaccttgagaaggaacaagaagaaaaagaaaatggtgtgattagggacctgaggtctgcaaagaaatttaaagctgaccagacaaattcaggaaataccacagttaataatggtttctcgggtcttgctgctggatgtggagattatccgatgaagctcgatgaagtggtgcaggatccatgcgacaagcctgggccatcacctgaagctaaaaatgacctgaatataaaagacaaaatggacgacaagcatgcggatgtgattgacttagatgctgatgattctgtcttccaacatgaacacaagaaaggactttctgccaaaccatttgggaacgatggtaacgatttggatttcaaaagtcggtctagtcttcaagaacattataggaaggaatccataacatgcaagacatatgtagcagaggaaaattcctttctaaaaccttccatggtaactgaaagatcagcacttcaggagagctttaccacaaacaaacttcaaagctttcaagaaactcctgttctaagaagtatgaaagctacaacttcgacatgggagaaagaaacactgacgattgatggcatctctaaacaagctactagaatggctcctggcactggaccccagcaggttcacaatttcaattctctttcaggtaagttattgtatggtccatcaagcagagataacttctgaatttaagttgcataataatatgcatattcaagttcacagggctatttttcttttcaacattctaattttcagggggaagaggcatagaacataaatttgaccaatatttctaatgaatgagtacttgattctgaaaaaatgcttaacaaactttctgtttaatgacctccttttcttattaccaattctttgaatatactgatgttcctttttcagcacatgtacttaacaacattgtttgaagcaaattgtgttttgtttacaaccagatgacttccaaataccaattagaaatcttggtggagagggaacaggaaaaagcgtcggcaaatggtgcaagggcgtagctacccctggatctctcaacacaaatgcaaataaaaggaatctgatcgccgtagggccagacggacgtgggggaaaggtcaaaattttgagagatcttggcaaattccaagtcagtttgataagttttcctcatctccttccttgtcagacagtaaagtagttttgtctcataactaaccacctgcatcaatctctgcaatgtttgctgcaggatagcaagactcaagcactatggcctaaggcacagaaggttggaagcagaggtgggcaatctcagatagatcatttctttgggaagagatgatcctgctgcgcaagctatgctaatatataccactttcaaactcttgcctctgttgctgcggtcaaattctgtttggagaactatttgatgtcctgcatctgtacttgtgtagaatccattgcacttaaggtgaaagctgaatccaaatttcgcagtgtcatcactattgggcctgaggggatagatagagcttgtaaacaatgagctgtgtaggaaacctgaattcctctgttcctcagaggctcaggtggtcatgtgtaccacattgctaaacattgtgtattgatagagctgaggagataacaggtggcttagctcacttgatccacatgcaaatacattgcaagctgccctttggctaagtctgaaacctatttgggtttcattgtactgccaactactccagcaaagcaaagctgggaatcacaagaaagttggacactgggttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0151700, RefSeq:Os08g0151700