Os08g0152500

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Revision as of 12:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0152500| Description = Conserved hypothetical protein| Version = NM_001067539.1 GI:115474814 GeneID:4344672| Length = 2835 bp| Definition ...")
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Gene Name

Os08g0152500

Description

Conserved hypothetical protein

Version

NM_001067539.1 GI:115474814 GeneID:4344672

Length

2835 bp

Definition

Oryza sativa Japonica Group Os08g0152500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3008696..3011530

Sequence Coding Region

3008973..3009417,3009814..3009983,3010939..3011051,3011195..3011273

Expression

GEO Profiles:Os08g0152500

Genome Context

<gbrowseImage1> name=NC_008401:3008696..3011530 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3008696..3011530 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcgcaacctctcctccatctcctcctccgccgcgtcgccttcgccgctctcaccggccgacggcttcctctgcgtgaaggacggggtggacgagatgatcaagtacgtggccaacgagccctccgtcgggctctacttcgtccagcagcacgcgcaggcgtccatgcccctcctcctcgacgtcaagggaaaggttgcagaaaagattcatgaggtaacattgcatactgaagatatagaggactctatctgtgcagtgaggtccatggcagagtttggacttccaattgctgatgatatgatcaaggacataaataaatctctcaagataatgtcaaagacccaaccaaagagggggttaatccagaaccccacttgggggttccaatcagggaaaagctcaggaacatgggaagaagatttgggcacaaccgacggaggaagcagccgtaattatttctcttccatgttcaacactgcgaagcagaaggcatccactctcagatggccacagcctgatttcggaacaaaagatgacaccactgaggagtcagagtcatctgcagctcctgaatcatcacaagctggtggacatggtgcatcgacaccctcagatacagagaaggatgatcttcctgtttcaagccagcttttagataacaatacagctactatgaaggagagctcttcgactgatatctccaaatcggtggagaattataacaagttcaaggaagaacaagaactcaaactacaagaatggcttagacagtctgaagaagctgatgataataaagagtga</cdnaseq>

Protein Sequence

<aaseq>MQRNLSSISSSAASPSPLSPADGFLCVKDGVDEMIKYVANEPSV GLYFVQQHAQASMPLLLDVKGKVAEKIHEVTLHTEDIEDSICAVRSMAEFGLPIADDM IKDINKSLKIMSKTQPKRGLIQNPTWGFQSGKSSGTWEEDLGTTDGGSSRNYFSSMFN TAKQKASTLRWPQPDFGTKDDTTEESESSAAPESSQAGGHGASTPSDTEKDDLPVSSQ LLDNNTATMKESSSTDISKSVENYNKFKEEQELKLQEWLRQSEEADDNKE</aaseq>

Gene Sequence

<dnaseqindica>2114..2558#1548..1717#480..592#258..336#cccacccacccttcttccttctccagctctcgcctctcgcctcgtccttgttcgtcatcgcgctcgctcgatttctcctcctcctctctctcgatcccctctactgcgagagattcccttgcttgaattctcctcctcctcctcctctccctccggtgagcggtggcggcggcggcgaatccgagctcctggtggtgtcgtggggggcggggtgattccgtgatggtcgcccgccgcgctctgcggcggacacggacatgcagcgcaacctctcctccatctcctcctccgccgcgtcgccttcgccgctctcaccggccgacggcttcctctgcggtaacgatcccgggcgggccggcctgcttgtttctttcttgctgttcttgctcctgattctttggaggaattccgtcgaacacctcgcctgcagttgcgtagcgatctgattccggtgtttattatcttggggggatttgcagtgaaggacggggtggacgagatgatcaagtacgtggccaacgagccctccgtcgggctctacttcgtccagcagcacgcgcaggcgtccatgcccctcctcctcgacgtcaaggtccatggccttcctatctctatctcctccttgtccttaatgttctaccggtatagggcatttgattcttttgcacatgctgcgttgcgcgttgggattgaaatgttatactgatctatcatcagcgcggccttatctcagaattgtgattggtatgaaattcagagatgcttgattaagagaaaagtagagcaacaacacattaaacacttggttagggggcataactattgttacagtgtgttagttgcattattaaagggatccagctgatttgttatatacccaattttgagtcttcagagtcagaattttttttttttgaacatgtcaccatataatccatcacccaagggaacttcagggaatttcatttatcaacttctgtgcgtgcatcttgtattatcaagttatagtggcttctttcagattttgacagaccacctcctacaccttccaacatgataacaagtccagagctaataaatattctgattagcattggcagaagctgatgcggtgtaaaccagttaagcatctaaaatttgatttttatttgttttcagtcaagggtcaggttgggatcgcaggtcatattatttgtgtgaaacaggttttttaccaatacattgtacaacaattaaagggaagctcttacaaaaacatggaagaacagatgaacacggtatacctgaaaggctgaaactttgttctcaactgacaatgctcgttatttaccattcagattttttctggtcctgtacaatattgcattccttcaagcagttttaagtttgaaaataagctgatacctactaataattagtaatttctcagctgtttgacaatttcatttgttcctgccagtggtcaccacttattaggaaatatcaaagttatctgcctaacgatatgattttgtggtattctaacatgagccctgttccctcatcagggaaaggttgcagaaaagattcatgaggtaacattgcatactgaagatatagaggactctatctgtgcagtgaggtccatggcagagtttggacttccaattgctgatgatatgatcaaggacataaataaatctctcaagataatgtcaaagacccaaccaaagagggggttcgtattctacctatcttgacaacctcctttgcattacatgttttctaacttttttgtttgtttaatacagtgctatacccaaatagcttcattcataccatcctttatagaacaatgaccttttggttttcctttttttcatgaagtatgaagcatgacagcagaacatgttatatataattagtaagataaagataaagttgttcaagcctctctgatagtgcctgttctttccactaacgttcaagtttttttatagcttctaaacttagtaactaacagaccactctacagctctggcttgatcatcccaggcccttcccgtaaagtataatttctatgcatatagttcatcttccgtcattggttctgagaaaaaatcactacactcaggttaatccagaaccccacttgggggttccaatcagggaaaagctcaggaacatgggaagaagatttgggcacaaccgacggaggaagcagccgtaattatttctcttccatgttcaacactgcgaagcagaaggcatccactctcagatggccacagcctgatttcggaacaaaagatgacaccactgaggagtcagagtcatctgcagctcctgaatcatcacaagctggtggacatggtgcatcgacaccctcagatacagagaaggatgatcttcctgtttcaagccagcttttagataacaatacagctactatgaaggagagctcttcgactgatatctccaaatcggtggagaattataacaagttcaaggaagaacaagaactcaaactacaagaatggcttagacagtctgaagaagctgatgataataaagagtgaggtggttctagctggtgcaacctagtacatttgctagagcacataccatgccatgttgtatcctatacatgcttacttgatgcacttccagaacttcagatggtaactgtttatgaagcagagcttgtaatcatgatgaggtacataatttatctgcctattagggaacgctgtaaattgccatactctgtttgccgttgatttatttattgccaaggcacagagatcatcaatgtactgtagaatagcctgaactattgatcatgcattttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0152500, RefSeq:Os08g0152500