Os08g0154250

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Revision as of 12:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0154250| Description = Similar to Monocopper oxidase-like protein SKS1 precursor| Version = NM_001188457.1 GI:297726044 GeneID:9269930| Len...")
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Gene Name

Os08g0154250

Description

Similar to Monocopper oxidase-like protein SKS1 precursor

Version

NM_001188457.1 GI:297726044 GeneID:9269930

Length

5192 bp

Definition

Oryza sativa Japonica Group Os08g0154250, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3119278..3124469

Sequence Coding Region

3119278..3119280,3119576..3119591,3119690..3119889,3120000..3120078,3120191..3120556
,3120904..3121120,3121802..3121940,3122305..3122575,3123333..3123442
,3124314..3124469

Expression

GEO Profiles:Os08g0154250

Genome Context

<gbrowseImage1> name=NC_008401:3119278..3124469 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3119278..3124469 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcggttgcggcggtggtggtcgcggccgtggtggcggcggcggcgtccgcggcggcccccgcgtcggccggcgagcccacgcgcgacgtgcggtgggaggtcggctacatgacggtggcgccgctcggcgtctcgcagaaggtgatcgcgataaacaaccagttcccgggcccactcctgaacgtgacaaccaactggaacgtgagggtgaacgtccaaaacaacctggatgagcccctcctcctcacctgggatggcatccagatgaggatgaactcatggcaggacggcgtcgccggcaccaactgcccgatccctcccgggtggaactggacctaccagttccagctcaaggaccagatcggcagcttcttctacttcccttcgcttggtctccagcgagccgccggcgggttcggcccggtcaccgtcaacaaccgcgccgtcgtgccggtccccttcgcccagcccgacggcgacatcaccttgttcatcggtgattggtacaccaagagccacgtcgaattgaggaaaatgctagatgatggtaaggatctcgggataccggatggaattctgatcaatgggaaaggcccttacagctatgacaacacattgattccagaaggccttcaacatgaaactgttggagttgagccaggcaaaacttatcgcttccgtgttcacaatgtcggcacctcaactagcctcaacttcagaatccagaatcacaatatgcgcctagtagaggccgaaggaacctacacttatcagcagaattacaccaatcttgacatccatgttggacagtcatactctttcttggtgaccatggaccaaaatgcaagcactgactactacattgtggcgagcccaagaatgaatacaactgctggtgctgcacgtccaaatccacagggatcattccgctacgactctatcaacatcactcagaccttcgttctcaagaacgagttacctttgctcatcaatggaaagcgtcgaaggacgataaacggggtctcatactctccaccagagactccactgaggcttgctgatctccacaacttgactggagtgtacaagactgacttccccacaatgccaggcaatgctccaccaaaaatggcttcatccacgctgaacgcatcgtacaagggcttcctcgagatcgtctttcagaacaatgacactggtgttcagacctaccatctggatggttactcattctttgttgttgggatggataatggtgattggactccagattgcaggagtaggtacaacaaatgggatgccatctctcgcagcactactcaggttttccctggagggtggactgcggttctagtctcgctcgacaatgttggcatctggaatctccggtctgagaagctggataactggtacaatgggcaggaggtctatgtgaaagtggctgatccactgggatacaacatcactgaaatgatcatgccagataatgcattgtactgtggtctactgaaagacttgcaaaagccacagattcaccagtaa</cdnaseq>

Protein Sequence

<aaseq>MAAAAAVAAVVVAAVVAAAASAAAPASAGEPTRDVRWEVGYMTV APLGVSQKVIAINNQFPGPLLNVTTNWNVRVNVQNNLDEPLLLTWDGIQMRMNSWQDG VAGTNCPIPPGWNWTYQFQLKDQIGSFFYFPSLGLQRAAGGFGPVTVNNRAVVPVPFA QPDGDITLFIGDWYTKSHVELRKMLDDGKDLGIPDGILINGKGPYSYDNTLIPEGLQH ETVGVEPGKTYRFRVHNVGTSTSLNFRIQNHNMRLVEAEGTYTYQQNYTNLDIHVGQS YSFLVTMDQNASTDYYIVASPRMNTTAGAARPNPQGSFRYDSINITQTFVLKNELPLL INGKRRRTINGVSYSPPETPLRLADLHNLTGVYKTDFPTMPGNAPPKMASSTLNASYK GFLEIVFQNNDTGVQTYHLDGYSFFVVGMDNGDWTPDCRSRYNKWDAISRSTTQVFPG GWTAVLVSLDNVGIWNLRSEKLDNWYNGQEVYVKVADPLGYNITEMIMPDNALYCGLL KDLQKPQIHQ</aaseq>

Gene Sequence

<dnaseqindica>5190..5192#4879..4894#4581..4780#4392..4470#3914..4279#3350..3566#2530..2668#1895..2165#1028..1137#1..156#atggcggcggcggcggcggttgcggcggtggtggtcgcggccgtggtggcggcggcggcgtccgcggcggcccccgcgtcggccggcgagcccacgcgcgacgtgcggtgggaggtcggctacatgacggtggcgccgctcggcgtctcgcagaaggtttggtggcgcgccatggcgtgcgctctgttcttgatttcttccgagaaatttgggccgccttgtctgatattttcttcttctttttttttgttttctctccgacatgttcttcttcttctctgtctccgttgattctgcgcgagtttctcgggtggtttcaaatcgaaaaacgtctctctctctctctctctctctctctctctcttgcgtggttttgaggtttgtttgatgatgaatctggggctaaaaaatgcttcctaatttttttttcgccggtttgcgtgggcggtttcgatcgcaccgatctcgtctcgtcgtggcggtttctgttccatgttcttgcaggggttgtaaatacgcgttgatcgatctgtcctaataaaagacgacgtaacctcatttcctccgaaaaaaataaatcggatcccgcaaactttgcaattttatcgttgataaaaggaaaaaagatcaacattgcgtacaaaagagaggggaataatgatatcatcttttctgggttggatttctgactctgtttctcgttgattttgatccttttgagtttttgttcatctgcgaaacaggtttgttgttgaaaattgatccatttcgagataaaacagaacacatttacacacaccagatttgagatttacagatagaaaatctggaaaaggatttgcggacacaattcttgtgcaagaatttaggggtgtcatgctcttgtttagttacagtcttatatttttttcttaccatatcaatatgaaacattgcgctatcttatgcgtattgttttaaaaaaatctagtgtaagaattgttttctgatggcatgaatgcaaatacttgtttttttttttttgcaggtgatcgcgataaacaaccagttcccgggcccactcctgaacgtgacaaccaactggaacgtgagggtgaacgtccaaaacaacctggatgagcccctcctcctcacctggtatttactaatcctgcatttcaattgcatagatccaaaattgactaagctggactagaaattttcgttaagatatttttatataaaaaaatcatgtattaatgaaaatttgcaccataattttcagtttctgtttctggtgaatttaaacagcacattcatagtgggattttagctgtacatttccattctgtgggggcctcttgggcttcacattaggcatgcatgctgcatttcggggaatttatgggcttaattagttgtgtcatgtagccaaatattcttatgctatattgagaatttgagataggataggcacaccactgtacttatccactggtttgcccattttctcaagttcatccgtgcaaaatgatcagtttcatcaacagttcattatgttgacaacttaatacattattatgtcaataatgcatttctaataagaataaatttcacttcaatacatgtgttcttcttgaattactgtactactagatcgattactagctaataaaatttgctgtacacaatctgtgttgcactttgcaactgaaaacaaggttagaaatgtgaagccatacataatagtaacatgcaaaatgccaaacactagagggtccttctgcaaaatttccttttaaaagtgagcctaaggctttgcctgcaatgggtgggtgggagtcattggcgccaaattttctctgcattggagtcttggagagctcagagctcacctccctcttggccatggcagggatggcatccagatgaggatgaactcatggcaggacggcgtcgccggcaccaactgcccgatccctcccgggtggaactggacctaccagttccagctcaaggaccagatcggcagcttcttctacttcccttcgcttggtctccagcgagccgccggcgggttcggcccggtcaccgtcaacaaccgcgccgtcgtgccggtccccttcgcccagcccgacggcgacatcaccttgttcatcggtgattggtacaccaagagccacgtcgtaagctccgagctctccctctgtctgtctgtctgtctgtctgtctgtctgcgattacattttagtttacagtgtcagtgttcataaatcgtcgaggagaatgatattaagttgctttcttgatatctcaactgtatactattttttcttggtttatgttgcaagcatggttatatgtagtaatgtagaatgatacttagatctgtactctctgaaaagtaagagaattcttgtgttcatcatttaagaattgtgaagtacagtgattttttgatctatggataagctatatggtgcattatatttgaagaaagtttttatctgttcttctttgaatgtgagaaggtatctctgcccaatgtaggaattgaggaaaatgctagatgatggtaaggatctcgggataccggatggaattctgatcaatgggaaaggcccttacagctatgacaacacattgattccagaaggccttcaacatgaaactgttggagttgagccaggtaagcacacttagttttcttttccccatcatatttgccttatcattagttttctgcatgacctattaagcctgattcagtttttacagtgatgcaattgcgaaacattatagatatgtagtcaaaatttggaaaaagtaaataatcatacttcctcagatgaaaaaagacatcatatcaattaccacctccatttcatattataagttgccttgaatttttttcctagtcaaacttctttaggtttgaccaagtttatttaatagaaaaatttggcaacatctacaatatcaaattagtttcattaaatgtaacattgaatatattttgatactatgtttgttttgtgttgaaaatattgctatatttttctacaaactttgtcaaacttaaaaaaaaattactaggaaaaaaaatcaaaacaacttataatatgaaatggagggagtagtaatcataaatagttgaagatcagctttcatcaattctgttattttgtagcagcaaaggacagaattttctgtctgaaatgtcttgctgcatttacatacagatatcaggatgtgaataaatgtctatcactgatcagttatcaggattactgcaaaaatctttcagtcatgccaattttaatgatctgaagatttctgactagaacaatatttcatatacttgttacaggcaaaacttatcgcttccgtgttcacaatgtcggcacctcaactagcctcaacttcagaatccagaatcacaatatgcgcctagtagaggccgaaggaacctacacttatcagcagaattacaccaatcttgacatccatgttggacagtcatactctttcttggtgaccatggaccaaaatgcaagcactgactactacattgtggcgagcccaaggttcgtcacgaacgagtctcgctggcacgatgtcaacggtgtggctgtcctgcagtactcaaactccaaaggaagagcttctggtccccttcctgatggtccaaatgatttctattacaagtcctattccatggaccaagccaggtctatcaagtgagtattaaccactagtactgttgtgctctgtactaacaaatatccttgcattattagtaactatgatgctgttgattaatgatagttttcttgattgtaagaatcatctagtttcaaggttgtcatttccagtgactacatctcaagatgacatgttctccattgataaccattgcaattgtatttttcagaatgaatacaactgctggtgctgcacgtccaaatccacagggatcattccgctacgactctatcaacatcactcagaccttcgttctcaagaacgagttacctttgctcatcaatggaaagcgtcgaaggacgataaacggggtctcatactctccaccagagactccactgaggcttgctgatctccacaacttgactggagtgtacaagactgacttccccacaatgccaggcaatgctccaccaaaaatggcttcatccacgctgaacgcatcgtacaagggcttcctcgagatcgtctttcagaacaatgacactggtgttcagacctaccatctggatggttactcattctttgttgttgggtatgtgatggaaaaccaaaacagtttcttttaccatgtgatcatgtgttatgaatttctggttagtcatgtaaaatgacacagtcctgcatcaccattttgtgaatttcaggatggataatggtgattggactccagattgcaggagtaggtacaacaaatgggatgccatctctcgcagcactactcaggtacacaacttcatgaaggacaatctgatcatatgtcaaatttgtatacttacaaaacatgtgcatccttgagtattctgaacaatgcaaatttgcaacatttttcataggttttccctggagggtggactgcggttctagtctcgctcgacaatgttggcatctggaatctccggtctgagaagctggataactggtacaatgggcaggaggtctatgtgaaagtggctgatccactgggatacaacatcactgaaatgatcatgccagataatgcattgtactgtggtctactgaaagacttgcaaaagtaagtttcaccggatcatttctgttttctctttgtttcactgatagtagtacattctgtttttggccacttaccttgtgttctggaaaaccttgcaggccacagattcaccaggtaaacagcaagtcatcggctcaagctgcagatcgatggggcgcgcgagttcttgcaatggtgttgctgatcattgcagctgtggtttccatttaaatttgttggaatcagatgaggatatcttttagttaggctctgtgggtgatagaaaatcatattgttctttgagtacagaacaacttgaggaagctgtctgtgcaaagtgcaaaacttggattctagaaatgaaaaacctgtcaattttcctacggtttttgttctggctttcacctgagattgcattgctcatgtgcagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0154250, RefSeq:Os08g0154250