Os08g0154600
| Gene Name |
Os08g0154600 |
|---|---|
| Description |
Similar to Topoisomerase I |
| Version |
NM_001067550.1 GI:115474836 GeneID:4344685 |
| Length |
6046 bp |
| Definition |
Oryza sativa Japonica Group Os08g0154600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:3135763..3141808 |
| Sequence Coding Region |
3136561..3137790,3137931..3138125,3138239..3138319,3138671..3138730,3138813..3138907 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:3135763..3141808 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:3135763..3141808 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggctgttgtcgatcctgttatgtttgacaacgacgacgaggaaggtccgatctccttcaagaggtcgagcacctctgtgaagaacaggcccacccccacaaagcaggagggctcatcagggaatgccggacctattaggagccctaaggctgttgcttccaatcaacagaagaatgggctgactggtgtttcgaggcctttgcaacagaggccgcagtcaagcagtccaaaccctcgacctttgggatcaggtcagccgaacagttccaaagaacatagtagccataatagtaactcagtggataagagtaaattgaaaagacctttcgtggaagataagtcggatgactcagaagatgaccataagccaatcggattaaggagaaaggtcgaggatagaaatttgaagaaacctgctgtaggaagtgggacagcaaatgattcagatgatgataaaccattgagtctcaagataaactcaacaaaaacgccttcgagtagtgcaaataaggctattgtactgaaaactacacctaaaattgagcaacctggtgatgattcagaggacgataaaccactggccagcaggttgccaactaatgctgctctgaaaaggggaggtaatgtttctgatgattcagaggatgagaagccattggctgcccgattttcgaaagttactggcaatgcatctgcaagtatctcaagttcaaaggacaaggtcctgtctgcaagtataaaagcaagttcttccagcaagatgtctaacaatgacgcgagcacatcacgaaattcaattaaaaggccaattgacaataataatcaaacaagttcagctctcaagaaggcgaggccttcagatgtttctgcgtctgcaagtgtcaaaagagaacccaaggcggatgacaatgacaatgtacctctttcacaaagactgaaaatgggtgagtcttcaaaaagcaagccacctgcaaagaatatcgtaaagaagagtccttcatctttaaagaaggacaacaagaaaatgaaaatgaaaatgaaaacaaagaaaacaatgaaaaattctcagttctcaaagacaatgaaggtccctcctggatctggtggtggacagaaatggactaccttggtgcacagtggtgttattttcccccctccatacaagcctcatggtgtcaagatgctttacaacgggcaacctgttgatctgacgccagaacaagaagaggttgccaccatgtttgctgtgatgaaagacactgattatgcatccaagcaaacattcattgacaacttcttcactgattggagaaaaattcttggtaaaaaccatgtcatcaagaaatttgagctttgtgatttcaccccgatctatgaatggcacctaagagagaaggagaagaagaagcagatgacatctgaggagaagaaagcattgaaggaagagaaattgaaacaagaggagaagtacatgtgggctattgtagatggtgttaaagagaaggttggcaatttcagagtagaaccacctggcttgttcagggggcgcggagagcatccgaagatgggaaaactgaagcgccgcattaaaccaagcgatattacaataaatatcggaaaaggggctccgatccccgaatgtcccatacctggagaaagttggaaagaagtcaaacacgacaacacagttacatggttggccttttggaatgatccaataagccaaaaagatttcaagtatgttttcttggcagcaagcagtgcattaaagggccaaagtgacaaagagaagtatgagaagtctcgaaaattgaagcatcacgtacacaaaattcgtgacacttacacaaaggatttcagaagcaaagataagacaaagaaacaaattgcagtggcaacataccttatagataagttagcccttagggcaggcaatgagaaggatgaagatgaggctgaaactgttggttgctgtacactgaaggttgataatgttacttgtgttcctccaaataaactgcagttcgacttccttggtaaagattctataagatacttcaatactgtagaggttgaactgcttgtatacaaggcaattgaggaattccgtgctggcaagaaaccaggacaagatctctttgacaaactcgatacaaccaggctaaatgctcatctaaaggacttgatgcctgggcttaccgcaaaagtgttccgtacatataatgcttcaatcaccttggatgatattttgcacaaagaaacagaagatggaactcttcttgaaaaaattgcggtttatcaacgagccaacaaagaggttgctataatctgtaaccatcagcgtagtgtctcaaaatcacatgattcccagatgactagattgaatgagaagattgatgaattgaaggcccaaagggatgaattgaaggcagacttgagcaaagtaaggaaaggaaagaatctaggcaatgacaaagatgggaaaccaaaaagaaatttggcccctgaagcgtttgaaaagaagatatctcagattgaaaccaagatagagaagatggagatggataagaagattaaagaggatttaaagacagtggcactaggaacttcaaagatcaattaccttgatcccagaattactgttgcatggtgcaaacgccatgaagtacccatcgagaagattttcaacaaatcactcattgcgaaattttcgtgggcaatggacgtcgacccggatttcagattttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAVVDPVMFDNDDEEGPISFKRSSTSVKNRPTPTKQEGSSGNAG PIRSPKAVASNQQKNGLTGVSRPLQQRPQSSSPNPRPLGSGQPNSSKEHSSHNSNSVD KSKLKRPFVEDKSDDSEDDHKPIGLRRKVEDRNLKKPAVGSGTANDSDDDKPLSLKIN STKTPSSSANKAIVLKTTPKIEQPGDDSEDDKPLASRLPTNAALKRGGNVSDDSEDEK PLAARFSKVTGNASASISSSKDKVLSASIKASSSSKMSNNDASTSRNSIKRPIDNNNQ TSSALKKARPSDVSASASVKREPKADDNDNVPLSQRLKMGESSKSKPPAKNIVKKSPS SLKKDNKKMKMKMKTKKTMKNSQFSKTMKVPPGSGGGQKWTTLVHSGVIFPPPYKPHG VKMLYNGQPVDLTPEQEEVATMFAVMKDTDYASKQTFIDNFFTDWRKILGKNHVIKKF ELCDFTPIYEWHLREKEKKKQMTSEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRV EPPGLFRGRGEHPKMGKLKRRIKPSDITINIGKGAPIPECPIPGESWKEVKHDNTVTW LAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLKHHVHKIRDTYTKDFRSKD KTKKQIAVATYLIDKLALRAGNEKDEDEAETVGCCTLKVDNVTCVPPNKLQFDFLGKD SIRYFNTVEVELLVYKAIEEFRAGKKPGQDLFDKLDTTRLNAHLKDLMPGLTAKVFRT YNASITLDDILHKETEDGTLLEKIAVYQRANKEVAIICNHQRSVSKSHDSQMTRLNEK IDELKAQRDELKADLSKVRKGKNLGNDKDGKPKRNLAPEAFEKKISQIETKIEKMEMD KKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIAKFSWAMDVDPDF RF</aaseq> |
| Gene Sequence |
<dnaseqindica>799..2028#2169..2363#2477..2557#2909..2968#3051..3145#3245..3401#3481..3606#3983..4063#4142..4232#4320..4453#4653..4721#4804..4893#4990..5093#5179..5347#5651..5719#aaggcgagagagggagggagaggagtcggaggcagcggcgcgggcgaggcgaggtgagagcgagcgatagaaatacgagagcgggaggagaggcgaggagagagagacacagataagctcagccctaaccctagctccccgcctcgccgccgccgccgccgccgccgccgcaccgctccccggggagcgggacgtcgccgccgcggcgcctaggtgggtatctcccctcctctctctctctatcccgctccttgcttccttgtttgcctcgcgttgggttgggaagggctcgtgatcggggcgggggtctcctccctagggcttgcggcggtgggggcgatggggggatggtgcggtggatcggggtggggagggggatgaacgggcggtttcgtcttgtccgggcggccgatctgaggggggagcggtggtttggttggttggtctcgtccgtagtgttgattgcggtattgatgtcacaaagggaggaaacctcgtcctgagctggaattggctgtgtttgtggcgggtgcatcggtgtggatgactcaaaggggtgattgcgtgggttgggatgcgatgggaactctgttctggagatggtttactttgaagcaggaattctgttgattagatttgcgcatagattgctttggttgatccattatagtgcacttgtgcattgtgctggaacggtggaatgctatcttcaggttgcttacatgagtttactttgtttgcaggtgtggttgactcagcatatttgttccgtctgccagccgccgcccctagggatcgatggctgttgtcgatcctgttatgtttgacaacgacgacgaggaaggtccgatctccttcaagaggtcgagcacctctgtgaagaacaggcccacccccacaaagcaggagggctcatcagggaatgccggacctattaggagccctaaggctgttgcttccaatcaacagaagaatgggctgactggtgtttcgaggcctttgcaacagaggccgcagtcaagcagtccaaaccctcgacctttgggatcaggtcagccgaacagttccaaagaacatagtagccataatagtaactcagtggataagagtaaattgaaaagacctttcgtggaagataagtcggatgactcagaagatgaccataagccaatcggattaaggagaaaggtcgaggatagaaatttgaagaaacctgctgtaggaagtgggacagcaaatgattcagatgatgataaaccattgagtctcaagataaactcaacaaaaacgccttcgagtagtgcaaataaggctattgtactgaaaactacacctaaaattgagcaacctggtgatgattcagaggacgataaaccactggccagcaggttgccaactaatgctgctctgaaaaggggaggtaatgtttctgatgattcagaggatgagaagccattggctgcccgattttcgaaagttactggcaatgcatctgcaagtatctcaagttcaaaggacaaggtcctgtctgcaagtataaaagcaagttcttccagcaagatgtctaacaatgacgcgagcacatcacgaaattcaattaaaaggccaattgacaataataatcaaacaagttcagctctcaagaaggcgaggccttcagatgtttctgcgtctgcaagtgtcaaaagagaacccaaggcggatgacaatgacaatgtacctctttcacaaagactgaaaatgggtgagtcttcaaaaagcaagccacctgcaaagaatatcgtaaagaagagtccttcatctttaaagaaggacaacaagaaaatgaaaatgaaaatgaaaacaaagaaaacaatgaaaaattctcagttctcaaagacaatgaaggtccctcctggatctggtggtggacagaaatggactaccttggtgcacagtggtgttattttcccccctccatacaagcctcatggtgtcaagatgctttacaacgggcaacctgttgatctgacgccagaacaagaagaggtgagatatataacattagctgatttttactttacttttcatcttttgatttgtaccatgagtgacattttaatcaggttctcctgaatccatatcttgctaccagataattgttcctctactaattatctctgttacaggttgccaccatgtttgctgtgatgaaagacactgattatgcatccaagcaaacattcattgacaacttcttcactgattggagaaaaattcttggtaaaaaccatgtcatcaagaaatttgagctttgtgatttcaccccgatctatgaatggcacctaagagagaaggagaagaagaagcagatgacatctgaggtactgcatgttttgttttgacttattcagcagaatgaatttagtttttgtgctggtaatctataaaaagttgtctacggaagtgaacaatctttaaaattcttcttctgcaggagaagaaagcattgaaggaagagaaattgaaacaagaggagaagtacatgtgggctattgtagatggtgttaaagagaaggtatttttctttgtgctgcaaaaatgtagttacagaaagttatggctagtaattgtagatatttctcttgttccccattcttctgttattgttaggtaaatgttttttttattataatctagcaattgttttgttttaccctagcgttcaattttgtgaataattttgcaccagatgtcaacaatgcataccatgtgttatacttagtttgcttcatgacatgtaatgttgcctcgatgttcttattttttttttaacatacatgacagctgtgtcatcttctatctgctgtgcatactaggttcatttcgcataaaattactctgggttaaagtactttgttcctttcaggttggcaatttcagagtagaaccacctggcttgttcagggggcgcggagagcatccgaaggtatatatatggatacatatactcgtcgtgctgttttaagtaagcgacatcattttgatgcttttttattacatcgttttagatgggaaaactgaagcgccgcattaaaccaagcgatattacaataaatatcggaaaaggggctccgatccccgaatgtcccatacctggagaaaggtacgctggaaattttcccattacctttgatgtgtaatttatatttgtgaaggggttgctagtatgtgctcactctttatttggtcatgtgtactgcagttggaaagaagtcaaacacgacaacacagttacatggttggccttttggaatgatccaataagccaaaaagatttcaagtatgttttcttggcagcaagcagtgcattaaagggccaaagtgacaaagagaagtatgagaagtctcgaaaattgaaggtgagagggttcattgtttgtgtcatggagatgttgagtttgcatgtacaaataatttttttctgcttggtcattgcagcatcacgtacacaaaattcgtgacacttacacaaaggatttcagaagcaaagataagacaaagaaacaaattgcagtggcaacataccttatagataagttagcccttagggcaggcaatgagaaggtactttctaacctgagctctctgactgacatttatgaattgggatatatttcttctgctatcggtgcagattgcacagtaatctcccccaccaaccaaccaataacaaaaaaaaaaggaatatgtgccttctgttctgacatctcttctgaatggatatttacactatgcaacatagcgttttggttcaagactgtatctaggattagctgtgtggctgctcatcataattttgcataatggtcaacataatgcgcatagatttttgttagaatacaatcttcaacaatgacatacatatagtttattaaatagctttgaattacagtgacatacatagtttgtatacttagccactacttcaaattcttttcaggatgaagatgaggctgaaactgttggttgctgtacactgaaggttgataatgttacttgtgttcctccaaataaactgcaggtattggtcttcattattaataaattctgcatgtgtaacttgatttagatgatatctgatgttccataacctttacagttcgacttccttggtaaagattctataagatacttcaatactgtagaggttgaactgcttgtatacaaggcaattgaggaattccgtgctggtaactctgccctgcaactctttctttccctccgatcctcaccttgcactagtggaatcacttctgttttcttaatctttattctaggcaagaaaccaggacaagatctctttgacaaactcgatacaaccaggctaaatgctcatctaaaggacttgatgcctgggcttaccgcaaaagtgttccgtacatataatgcttcaatcaccttggatgatattgtaagttcagatagatcttcacatctttttcttaaactttcactgctgtatgaagtgattgattgaagtttgtaatggtttaagacattttagtagtatatatgttgttccgttctgtttacttgaagctcaagtgtgtaacgtgttatttcacaatagttgttttctgaacgtatgtctattggtgctgattttacagttgcacaaagaaacagaagatggaactcttcttgaaaaaattgcggtttatcaacgagccaacaaagaggtctattgtgtttctctttaagaaatagaaaaaacttatatttgacctgttttgatctcaaccatacttcttgtttactcaggttgctataatctgtaaccatcagcgtagtgtctcaaaatcacatgattcccagatgactagattgaatgagaagattgatgaattgaaggttgaatttctactgcaaatgattagcccaacattgtaccatttcattcttttgtccttttctggtaaactctcttgttttttttcttttctccaggcccaaagggatgaattgaaggcagacttgagcaaagtaaggaaaggaaagaatctaggcaatgacaaagatgggaaaccaaaaagaaatttggcccctgaagcgtaataatctcaatcacagatagatctctattttgtatatatacaaaaaaacaatgttgagaaatctcaccaaatttgcttgcaggtttgaaaagaagatatctcagattgaaaccaagatagagaagatggagatggataagaagattaaagaggatttaaagacagtggcactaggaacttcaaagatcaattaccttgatcccagaattactgttgcatggtgcaaacgccatgaagtacccatcgagaaggtaacagtgctttaggacaactctatttttctttccatatgaattggcctatgcaaagttgacaggcacatcctcattgttcttatcgagattacacttcattttatattgggggtgggattctgttcaactaaactataactgtgcatacaaaaaaacatttgatttgaaatcccggatatttgaaatgataatagtctgtcgtcattgcatcctgaacaaagtaaaattttcatttggcatatgatcaaatcaaatgattgaaccgattacattaactgacagtactgttcgccttgacagattttcaacaaatcactcattgcgaaattttcgtgggcaatggacgtcgacccggatttcagattttaagagggtacaagagcattggctactggtcatccggcctgtagtaaagttgatccagcttccagtccttgtcccggacactaatttgcagctaggaaaggaagagctcggtgtttgtttttgaagtcccctgctcctggaaagaaggaagcacccggcattctcattgtaggctttttttttcttttactacttgttggtgcctttgccatcggtcctcaagttctgtatgcatttgggctgaggaattttagctcgctgagaacgaatggacattcattttataccgaattaatctcaaatataccatgaggtttcgtttggttgcgg</dnaseqindica> 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| External Link(s) |
