Os08g0155100

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Revision as of 12:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0155100| Description = Major sperm protein domain containing protein| Version = NM_001067554.1 GI:115474844 GeneID:4344689| Length = 3839 b...")
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Gene Name

Os08g0155100

Description

Major sperm protein domain containing protein

Version

NM_001067554.1 GI:115474844 GeneID:4344689

Length

3839 bp

Definition

Oryza sativa Japonica Group Os08g0155100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3170598..3174436

Sequence Coding Region

3170863..3170911,3171663..3171733,3171828..3171909,3172024..3172139,3172239..3172400
,3172505..3172549,3173444..3173521,3173979..3174089

Expression

GEO Profiles:Os08g0155100

Genome Context

<gbrowseImage1> name=NC_008401:3170598..3174436 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3170598..3174436 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgcgagtttcctcgagatccagccttcggagctctcattcccctttgaactactgaagcagagctcatgctccatgcaactcaccaataagaccgaccattatgttgcatttaaggtcaaaacaaccaacccaaagcaatactgtgtgcgccctaatattggcgtcgtattgccggggtctacatgtgatgttacagtgacgatgcaagcacagagggaggcacctccggatatgcagtgcaaggataagttccttgttcaaagtgttgcagctgagaatggtgcaacaactcaagatattagtgcagaaatgttcaataaggtggcaggaaaggttgttgaggaattcaagctacgtgtagtctatgtgccaacgactacatcctccgcaatgcctgaagactctgaacaaggaagttctgctcggccatttgcacaagaaaatggtatccataattcaacaatgccacaacctgtttttagatcatctgctgaaccaacaaaggagaggcccacagagccatcgtccatgatctccaaactaaatgaggagaatagggttgctattcagcaaaaccagaagttacgacatgagctggagctcctacggaaagaaagcagcaaaagcagtggcggtttctccctcaccttcttggccatcgttggtcttctcggcatcatcgtgggctacatcctcaagaagacatag</cdnaseq>

Protein Sequence

<aaseq>MSASFLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTT NPKQYCVRPNIGVVLPGSTCDVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDI SAEMFNKVAGKVVEEFKLRVVYVPTTTSSAMPEDSEQGSSARPFAQENGIHNSTMPQP VFRSSAEPTKERPTEPSSMISKLNEENRVAIQQNQKLRHELELLRKESSKSSGGFSLT FLAIVGLLGIIVGYILKKT</aaseq>

Gene Sequence

<dnaseqindica>266..314#1066..1136#1231..1312#1427..1542#1642..1803#1908..1952#2847..2924#3382..3492#cacgagctcgcgagcggagattttcccccacgatttttgctgttcatccgtgtgggggaggagagattccgcgtcgattggtggtcggatcggagcgaggagaagcccccgtgttcttggctttttttcccccgatcgaatccggtggaaagcgagcaataaaaaccacttcttttctttttcgtttctggttttctttttcttgttgggtttctcttcctcctgctcgagtttgatctcttgattcgtgaggagtgtggcgaagatgagcgcgagtttcctcgagatccagccttcggagctctcattcccctgtaagtttttggcccagatctcgcctccttcccctccccctgctcgaattgatcgatgtgagtcgttgatggatcttggtcaaagctttggatcttgggggtggaagagaggctgtttgctctctgtttgatccgtgtcagcttgagattcgtcgagtgctgtggtcgattcggccattggatcgtggaagagagaaagagagagagagagagagagagtgtgtgtgtgtgtgtgtgtgattcttgtggtggttgctcttgctgctactgcatgtgtgtctgccttgtttgttttgctgggatttgtgtgagctaggtctcgtgtggttggttgatgaatcgatacggggactaaatttggtgatggcctgcttcgcatttgcgtagaatcatcgtttggtagctgtctgtacttccaggagttttgggatcttgtcagctagtatgtgccttttgaccatgctgatctgctcctgatttgtcgggaagctcgaatgcaatgtccatgcaattcttcatggttattgggatttgattcgatggcagttataagtcttagattgatatagcatgcttagtatgttgatttttttttcatttttttacttaagtttgttgcttcttttttcattttgtcctaaaatgatagagtatgtctttgtagcgaatgtccggtgggttctattgtgttttttttttttttttgcttcagatattctcttgaaactaatttactgtttcgtatatgcagttgaactactgaagcagagctcatgctccatgcaactcaccaataagaccgaccattatgttgcatttaaggtaatctacttgagatgtcacctctcacacgtttctagttgtcaccattcatttctgaatgatttaaatctgttacctcatccatggctggcaggtcaaaacaaccaacccaaagcaatactgtgtgcgccctaatattggcgtcgtattgccggggtctacatgtgatgttacaggtagctgccactccattacatagtgaaactataggataataccagtacaagtctgtttaagatagatagctcagatatctatttagaagtctgcttaacatttggttttattagtgacgatgcaagcacagagggaggcacctccggatatgcagtgcaaggataagttccttgttcaaagtgttgcagctgagaatggtgcaacaactcaagatattagtgcagaaatggtaactactttgcagctcttcattttgtgttgtttcaatcaatttgctatatgcatctgttacaacatctcatcccttatgtttttattatgataacagttcaataaggtggcaggaaaggttgttgaggaattcaagctacgtgtagtctatgtgccaacgactacatcctccgcaatgcctgaagactctgaacaaggaagttctgctcggccatttgcacaagaaaatggtatccataattcaacaatgccacaacctgtaagtcgatcatgtttcctcatttctttattttgtgctcttgtttgtaatcagacttcggaggatctattttttaattatttgtaccgatgtgcaacatttaggtttttagatcatctgctgaaccaacaaaggagaggcccacagaggtagtctttttatcttacttttgtagttagatatttaattgaagaatcagtattattatagaaaagtattgcaactttctagatgaactaagtgtcaaataataatgttggaattatgtgatgtgcccttgttcttttcgactttacttattgtgctcaagtaactaataatgcacagcttatgataacaaagttaagtaaaactggagataattgcagagcataagcccaggcatcctggatctgagtatatgctgtagttgaattgcaagtgatcatgaatcctgactgccgcgcagcatgacattttagtgtttagtatgctttcatgagaccaaaattatagcttttgtttgctttcccagcatgcccctctttaaaattgaattgatgagcacaattacaacatatatgtggagatgcgacatgtacttataagtaattcatggatggcatgtcaccacatatatgtttattatctcactgaattgatttatgcaaaatatctgattacttgctaatatctaatctgaaagctagaatcaacttagctttaaattcagtactacacaagtcaatattttcttttggaaaaccggggcgccttggttgtttatgattcatatgaacttgtctatttgctgcaagcttttccttgctttagccatgaatgacagagtgcatccaatgagtgatgagcttggcacacaggaaaatataggtcatgatagtaatcaggcattttacgtaccgtatgagataattcagtgataatagaaaagccaaaatacaggaacaggagctacatttagttgttagcatgtctttatattccaaaatgcttttaagatttcttttgataaatcacttgttgatgatttatattcttatcagccatcgtccatgatctccaaactaaatgaggagaatagggttgctattcagcaaaaccagaagttacgacatgagctggtaagtacttcaaccattatgaaacagcactagtcgtaccatcattcaaaggaaataaataattgcgatcacaagaactgatggttgacattgctaaaaggcatatcaagaagttgctgctttcttcgtacaactggacttctactttttttttttatggactgtgaatttcaaatttgtgacccattggccattgtttttttgttctgcttaattcaattaaaccaatcatatcaactgtcatgtgatgactagaatctggtgactaagttctcactgacaaatccagatttgtcgatttggagacaaaacaaacatgcgcaatacaaatccggctgctaaattctgcacttgctcaatgctgcattttatctatagcttgcacacgcctgtgaatttaatggattctacgaactgaacattgtgttgatgaaatctctatttatctttcaatcaggagctcctacggaaagaaagcagcaaaagcagtggcggtttctccctcaccttcttggccatcgttggtcttctcggcatcatcgtgggctacatcctcaagaagacatagaagaggtagaggttcccaacaaaagttatactcccaggaaaggatacccctcatattggtatgccgcgcatcgtgtttttttccctcctaaaaggagcacctgtcctaacttgtaacaacaatactcctcctagatgccatggtttgtgtacattatggtggttttacgcttcgctgcggttttttttttttttacattgactaggcttgatttttaagagttttaactggtgcaactgtttgacattctccataatcttttattctttctttctgatcaatttatcatcatactgttaaactttaaatttctcttccagtcacattggcaggcagtgcttgatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0155100, RefSeq:Os08g0155100