Os08g0156600

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Revision as of 12:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0156600| Description = Major facilitator superfamily protein| Version = NM_001067559.1 GI:115474854 GeneID:4344694| Length = 3365 bp| Defi...")
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Gene Name

Os08g0156600

Description

Major facilitator superfamily protein

Version

NM_001067559.1 GI:115474854 GeneID:4344694

Length

3365 bp

Definition

Oryza sativa Japonica Group Os08g0156600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3280108..3283472

Sequence Coding Region

3281387..3282323,3282409..3282971

Expression

GEO Profiles:Os08g0156600

Genome Context

<gbrowseImage1> name=NC_008401:3280108..3283472 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3280108..3283472 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcattctcatgaaatgacgagtaggaaacctcctggtattcgattattcggaggcattacggtgctacggacgtaccagacacttgttttggtgcttacatttgtcgcgtatacttgctttcatatgactaggaagataccgagtattgttaagagcgtgcttgatccacagacaaagttggggtcctctccatggggacgactgcacacaaaaaacactcttaacatcggttggttgccgtttaacaccattgatggctcagcattgcttggtgagatagatgtggcgtttcttgcggtttattctgttgggatgttctttgctggacatcttggtgaccgcatggatttaaggatcttcctgacaattggcatgtttggaactgctgtgttcactgccctttttggtgctggatattggctaaatatccacaatttctactatttcctggtcattcagatgattgccggtttattccaagcaattggatggccttcagttgtcgcgattgttggaaactggtttggaaaaagcaagaggggattgattatgggcatttggaatgcacacacttctgtcggcaacatatctggttcactgctggctgcatttctgctgaagtttgggtggggctggtcatttgccatccccagcttaatcatggttgctgtcgggttgttggtgtttgtcttcttaccggttagcccagaggtgatggagatagacattgatgatggggagataagctctgttaaggatactaccaaggagcccctcttggaaccaggacaagaagtgaaacacaatgcagtaggtttcttagaggcttggaagatacctggagttgcgccctttgctctgtgcctcttcttctccaaattggttgcttacaccttcttgtattggctaccgttctacatcagtcatacacctattggcggtgagtacctctcagatgctttggctggcagcctatcaacaatctttgatgttggaggcgtgttgggtggagtccttgctggtcacatctcggatcgcttaaatgcacgagcggttacagctgccagcttcatgtactgcgcgatacctgccctcttcctataccgcacatacggcagcatgtcgataatgtggaacatttgcctcatgttcatcaccgggatgttcgtcaatggtccttatgccctaatcacaactgcagtgtcagctgaccttggcactcacagctcattgaatggaaattcccgggcattggctactgtgacagccatcattgacgggaccgggtctgttggcgccgccattgggccattgctgacaggctacatctcgtcgagtagttggagcgctgtgttcacgatgcttatggcagcagctctccttgctgggctcctcttgacacaacttgtgtgcagtgaactaaaaggaaaggcgacctccaatgcgagcaaggatgtcgccgatgctcaaggtacctactcagatgaggtgtaa</cdnaseq>

Protein Sequence

<aaseq>MAHSHEMTSRKPPGIRLFGGITVLRTYQTLVLVLTFVAYTCFHM TRKIPSIVKSVLDPQTKLGSSPWGRLHTKNTLNIGWLPFNTIDGSALLGEIDVAFLAV YSVGMFFAGHLGDRMDLRIFLTIGMFGTAVFTALFGAGYWLNIHNFYYFLVIQMIAGL FQAIGWPSVVAIVGNWFGKSKRGLIMGIWNAHTSVGNISGSLLAAFLLKFGWGWSFAI PSLIMVAVGLLVFVFLPVSPEVMEIDIDDGEISSVKDTTKEPLLEPGQEVKHNAVGFL EAWKIPGVAPFALCLFFSKLVAYTFLYWLPFYISHTPIGGEYLSDALAGSLSTIFDVG GVLGGVLAGHISDRLNARAVTAASFMYCAIPALFLYRTYGSMSIMWNICLMFITGMFV NGPYALITTAVSADLGTHSSLNGNSRALATVTAIIDGTGSVGAAIGPLLTGYISSSSW SAVFTMLMAAALLAGLLLTQLVCSELKGKATSNASKDVADAQGTYSDEV</aaseq>

Gene Sequence

<dnaseqindica>1280..2216#2302..2864#gaaccacccaaacacccaaaaaaaagaaggcaaaaaaagaaaaaatctcaccacgagcagcacaagaactcctctcctctcttctcttctcccctactccttgattgaaaacccacgcatcctcctccttcccattgcgcattccggctagtcgcctcgccgatccctctcccgcccggcgcggatcgtcgtccccttcgcggaggaggtgccaatccctgttcttgattttttttttaaaaaaaggaaaattgttctttgtactgtgtggagcggattttgggggtaatctggtgctttgtggtgttcgttgttagggaaagtttggttatttttgggtggatttttgtatgtcgtgctaaatgggtttagctttagggggagtttatggatttggtcaatgttttgagacaggagagtccagagttcagagttcagagacgagatgttcttattatgcgttttgttcgttgatttgggaagtttattaggtggattcaacgacaatattcagtagtaacgattatattgggttgaaactggaattgtttgggagttaaaggtttgcgtttgtggagcttgtgaaaaaaataattaattggtcatgagattgaggtcaattcgcctttttacttgtcctggttaatagttaaaaagatggtgttagagtcaaggaaaagtcggttgcctgctaagtgacgcatttgcaccaagatggaagctggaaaggcagcttttacctactttttgagaaaaaaaaaagaggacaatcttgtagtggtttgtgcatcagcaaggtctcaggtagcacgcatgatcttggtttgctctagagaagtaagagtacagaatatttcctttttttttcccactctggcccactggttgtattgccaagtaaatagatgggccaatttggttgtttcctgaaatactaaatttgagatgttcttagatcatcaaatttgcccatgtttacatgataactttttagacagtgatttataatgatggataacttgattggtggtactgtgtaaggctgaattttggattagtagcttcttgtcttttgaacagcatgatcgctttcttgatgcagtagtggttcataaatgtgtagctaagatcgtctatctaaacacaaattaatgcactcaatgtctcaattagtccattgtcttacttacatcctcctctgatggtttcaggtgttaatcattcttggaccaagaagtctgtctctgctttgtcagtaactagcaaccttggtgttctcatggctcattctcatgaaatgacgagtaggaaacctcctggtattcgattattcggaggcattacggtgctacggacgtaccagacacttgttttggtgcttacatttgtcgcgtatacttgctttcatatgactaggaagataccgagtattgttaagagcgtgcttgatccacagacaaagttggggtcctctccatggggacgactgcacacaaaaaacactcttaacatcggttggttgccgtttaacaccattgatggctcagcattgcttggtgagatagatgtggcgtttcttgcggtttattctgttgggatgttctttgctggacatcttggtgaccgcatggatttaaggatcttcctgacaattggcatgtttggaactgctgtgttcactgccctttttggtgctggatattggctaaatatccacaatttctactatttcctggtcattcagatgattgccggtttattccaagcaattggatggccttcagttgtcgcgattgttggaaactggtttggaaaaagcaagaggggattgattatgggcatttggaatgcacacacttctgtcggcaacatatctggttcactgctggctgcatttctgctgaagtttgggtggggctggtcatttgccatccccagcttaatcatggttgctgtcgggttgttggtgtttgtcttcttaccggttagcccagaggtgatggagatagacattgatgatggggagataagctctgttaaggatactaccaaggagcccctcttggaaccaggacaagaagtgaaacacaatgcagtaggtttcttagaggcttggaagatacctggagttgcgccctttgctctgtgcctcttcttctccaaattggttgcttacaccttcttgtattggctaccgttctacatcagtcatacacgtaagcgctctttttccaacttccttcaacttgtgtgcaaaactgtttttagtgtgcttttctaacagaacttcacttgtttcagctattggcggtgagtacctctcagatgctttggctggcagcctatcaacaatctttgatgttggaggcgtgttgggtggagtccttgctggtcacatctcggatcgcttaaatgcacgagcggttacagctgccagcttcatgtactgcgcgatacctgccctcttcctataccgcacatacggcagcatgtcgataatgtggaacatttgcctcatgttcatcaccgggatgttcgtcaatggtccttatgccctaatcacaactgcagtgtcagctgaccttggcactcacagctcattgaatggaaattcccgggcattggctactgtgacagccatcattgacgggaccgggtctgttggcgccgccattgggccattgctgacaggctacatctcgtcgagtagttggagcgctgtgttcacgatgcttatggcagcagctctccttgctgggctcctcttgacacaacttgtgtgcagtgaactaaaaggaaaggcgacctccaatgcgagcaaggatgtcgccgatgctcaaggtacctactcagatgaggtgtaagactgtaagtaagatctagtcgcaccccaagacacgatacatggattagattctcgtagctccaaagcactgcttggcaagaagttgcattttattgcttcctgcacatgtcttgatcacctctggtttgaggctgaaataaccaaagagatgtggttaccaagtggtttgcttaatgcaactccagaaagaggtgcatgaaatagatagattagtttagtttcaggttcagagaatacaggggtgaaaacgcctcaaccaaagtttctgagcccaaatataggctcaggccgccttgtacatatactgggcaataggttatcattgtgttgtgtgtagtaagtataaattcaagcttgtatcctattgttgtagtttagggcagacaaagggaacctctcttgttcaaaggttacccaaagtctgtgtttgctggccatcttggcctcgttttgtatatgtaaagttgagaagattgagaaaattttgaattgaggtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0156600, RefSeq:Os08g0156600