Os08g0157100

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Gene Name

Os08g0157100

Description

RNA polymerase II associated, Paf1 family protein

Version

NM_001067564.1 GI:115474864 GeneID:4344699

Length

4791 bp

Definition

Oryza sativa Japonica Group Os08g0157100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3312249..3317039

Sequence Coding Region

3312553..3312663,3313160..3313312,3313408..3313479,3313594..3313662,3313774..3313860
,3314100..3314205,3314465..3314584,3314674..3314753,3314844..3315024
,3315118..3315225,3316093..3316161,3316807..3317006

Expression

GEO Profiles:Os08g0157100

Genome Context

<gbrowseImage1> name=NC_008401:3312249..3317039 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3312249..3317039 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgcggcagtcacaggccacggttctgcagaagacgcagcaggtgcgcgccgcccagcagccgcagagccgccaccatcagcagccatcgggtgggtcccggccagcggtgaccgcgactcgccccgccgcagctcccaacgccgagagatttgagaatcgcctcaagaagccgacgaccttcctctgcaaacacaagtttaggaatgagctgccagatccaagctctcagctaaaatggttgccactgaacaaggataaggaccgatataccaaatacagaatcacttcattggagaagaactacatacccaaaatgattgtccccgaggatctcggaatacctcttgacctacttgatatgagcgtatataatactcctcctgttcagccacccatggctccagaagatgaagagctattgcgtgatgatgaggttctcacccctgttaaaaaagatggtataaggaaaaaagagaggcccaccgacaagggtatgtcttggctggtcaaaacacaatatatttcgccacttagcaccgatgcagcaaaaatgtccattactgaaaagcaagcgaaggaaaggcgagaatcaagggagggccgaaatactttcttggaaaatattaatgacagagagaagcaaattaaagccattgaggactccttcagggcagctaaatcacgccctgttcaccagactaaacgtgggatggaagcagaatgggttctgcctttgcttcctgattttgataggtatgatgatcagtttgttatggtgaattttgatggagatcctactgccgattcagagcagtacaacaagctagagagatctgagcgtgatgaatgcgaatcccgggctgtgatgaaaagttttcttgtcaatggttcggaccctgcaaaacaagagaaatttttagcatacatggttccatccccccatgagcttagcaaggacttggatgatgaaactgaagatattcagtattcctggcttagggagtaccactgggaagtaaggggggatgacaaagatgatcccacgacatatcttgtcacatttgatgacgatggtgcaaaatatttgcctcttcctactaagctagtattgcagaagaaaaaagcaaaagaaggcagatctggggatgaaattgagcatttcccagtgccctccaggattactgtgagcagaacagctcatggtggtatgatggaacatggagaatcttctagcatgcatgagaatttgaagagacaaagatcttcggttgatgatgatctctatgaccatcctaagcattctcgagtagaagatatggatcagtatagtggagacgaatattctgactga</cdnaseq>

Protein Sequence

<aaseq>MMRQSQATVLQKTQQVRAAQQPQSRHHQQPSGGSRPAVTATRPA AAPNAERFENRLKKPTTFLCKHKFRNELPDPSSQLKWLPLNKDKDRYTKYRITSLEKN YIPKMIVPEDLGIPLDLLDMSVYNTPPVQPPMAPEDEELLRDDEVLTPVKKDGIRKKE RPTDKGMSWLVKTQYISPLSTDAAKMSITEKQAKERRESREGRNTFLENINDREKQIK AIEDSFRAAKSRPVHQTKRGMEAEWVLPLLPDFDRYDDQFVMVNFDGDPTADSEQYNK LERSERDECESRAVMKSFLVNGSDPAKQEKFLAYMVPSPHELSKDLDDETEDIQYSWL REYHWEVRGDDKDDPTTYLVTFDDDGAKYLPLPTKLVLQKKKAKEGRSGDEIEHFPVP SRITVSRTAHGGMMEHGESSSMHENLKRQRSSVDDDLYDHPKHSRVEDMDQYSGDEYS D</aaseq>

Gene Sequence

<dnaseqindica>4377..4487#3728..3880#3561..3632#3378..3446#3180..3266#2835..2940#2456..2575#2287..2366#2016..2196#1815..1922#879..947#34..233#aagcagcgggccgaggatcggaagaaccagcagatgatgcggcagtcacaggccacggttctgcagaagacgcagcaggtgcgcgccgcccagcagccgcagagccgccaccatcagcagccatcgggtgggtcccggccagcggtgaccgcgactcgccccgccgcagctcccaacgccgagagatttgagaatcgcctcaagaagccgacgaccttcctctgcaaacacaagtgagtggcacaaagttttgtattctgtgattatcagagtagctattggagaaaagagagtgtattaggtcgtagaagtttatgttttcggcaaaactgtagtaattcttagctaacacttttggtcttacaagtgaagtgtgtgttttgatcaaacttaaagttattcttagatacagtttggtagtattttggttggtttatgccttaagagcaacctgcgcggttgctaaatgctgtgatgctggactagtgacaagccgcagctgcctattagatgttccaaggcaacatatggtgtagtggcattgagatgcaaatcaaccattttattgtatttttattttttacttttagttctttatgcttaattcgagatagtcacttagaatacagttcatagttcttaagaggttgatgggttatgcttgtctttagttatttctttttataaaattaaaagaggagcccttttgcgctgtgaaaaaaatataggtgaaagtattgctgtagtgatgtgattggcattttcccaaatttagatactttccagagcaactgatgtgcatggaatgtaatattgcgattatgtctctatttcagaatggaactctttgatgaatcttttgttatggattggtgcaggtttaggaatgagctgccagatccaagctctcagctaaaatggttgccactgaacaaggataaggaccggtataaagaactacttgtctactctcctttttctcggattgatttctattgttgcttgttgtagtggtgattagcaatgcacctgttacagtacaagccatttcaatgttgtttatctagctttatcatcttccgatttgaagataactttgtgtcaagacaactgaggttggtcatttactgatcatagagcgtaagtcctttctttgtgtgttgccactaagtgcccttcatttgttgttagagagtactctcccaaattttcggtcatttgggcagcttgaatttaggtgtagtagaccgagcagaaaattgaattattccatgttcctttaatttaccatgtcattttgtgaatgctgacgattagatctttgtgaagaatttatcttcacaaaaaatcacttcatgatccttgatgaagtaggtcaagtggtggtattggagcgttatgcagcagccatgtttttcatggcttgaaggataaattaagttagaatatttctggtagttgtgtaattctcttgacaggaaatgattgccacattctggtttatgtatggttcctgaagcacactgtttcttagaaaaacagtcattatcactagctacttcattgtgtatgagagcttgccagtgcacctttgttacacctacacagaggtcctgtgccatttgcttttgatttttttttttcaatttgcatagcctcctctgcttttcacttttattccgctatccagaacattagtctgtgttgaatttttctgtttctctctactgttcttcgccgtgcatggtgctcttaatattattttaggatgtctgtgttcactctttgttttgctatccgctacctctttgcagatataccaaatacagaatcacttcattggagaagaactacatacccaaaatgattgtccccgaggatctcggaatacctcttgacctacttgatatgagcgtatataagtatgaattgagccagatatatgtattcttagctgctatccttataagaagattctttttagcatacctaacttatgcacaaactatttttagtactcctcctgttcagccacccatggctccagaagatgaagagctattgcgtgatgatgaggttctcacccctgttaaaaaagatggtataaggaaaaaagagaggcccaccgacaagggtatgtcttggctggtcaaaacacaatatatttcgccacttagcaccgatgcagcaaaaatggtaatgccaaccatccttctgtagatttagttacagaggttctgctggattactttatacatattatataagcttggttggctattccagtccattactgaaaagcaagcgaaggaaaggcgagaatcaagggagggccgaaatactttcttggaaaatattaatgacaggtatggcttccttttacctagctcactcaccctgttttgcaaacctggtctagccagtgacactacttctctatgcatttgtataccagagagaagcaaattaaagccattgaggactccttcagggcagctaaatcacgccctgttcaccagactaaacgtgggatggaagcagaatgggttctgcctttgcttcctgattttgataggttgggcttgatactttgttttttcagcgtgttcttcatatctaaatagagaaaaaagctatttgatttcccacctactgtaatgtcaagatagtctactgcaaaatctattgttgctgtaaaaagttatatgatagtagtttttgttatttcttttggttttcgtttctaaggtatcactgaacaaaatgtttgccttggatcgataaaagtgttacattttaattgatattgggttcacaattttgttgatctttaggtatgatgatcagtttgttatggtgaattttgatggagatcctactgccgattcagagcagtacaacaagctagagagatctgagcgtgatgaatgcgaatcccgggtgagttgtttttttctttttggctatttttttttctggtgttctcataactctaggttccattgcaacatgtatttaatatgtttgagctgatatgggtgcatctactttttagaggcgtagtgatgtttctcagaaagcaatatgcattttagatccatatatttttggatatgcctaatactccacctagtaatacccttgagtatcatcgagacattttgatgcttccatgacaggctgtgatgaaaagttttcttgtcaatggttcggaccctgcaaaacaagagaaatttttagcatacatggttccatccccccatgaggtatccatccttttctaatacatatgtatttgaaatatcatgtagcatgtttagttttagtttttaccaatggtgcatcaatctcatggtgattatcgtggtttccttcagcttagcaaggacttggatgatgaaactgaagatattcagtattcctggcttagggagtaccactgggaagtatgtggatattttctactgtttctgctatcttctttaaaaaaagaaaaaaaatgttagctggtgtagaagtgctcttccgttttacttatcttatcttgtttcatggtccaggtaaggggggatgacaaagatgatcccacgacatatcttgtcacatttgatgacgatggtgcaaaatatttggtaacttgctctatgcatattatattaatttttatatgtgagaatgatttattgcacgtttgtgaacatatggcatttttatgttctttttgcagcctcttcctactaagctagtattgcagaagaaaaaagcaaaagaaggcagatctggggatgaaattgagcatttcccagtgccctccaggattactgtgagcagaacagctcatggtggtatgatggaacatggagaatcttctagcatgcatgtacgacttgttctccctttatgattgttggcttgacatctcggtattcagcaaattatttagttgttcactagttctatactagacaacatactgctgctagctaacttgtttattctacaatctttgttttattactgcctttttttgtaacacaggattttctcagactagttaaaaaacataagacgtgaaattttcctgttcgtgctcacctatcgtattctctctattataagtaatgccttaattaatattctcttcccagtttctaaggtattcaattaagatttcactgtcatatgtattctctttataggtttcttatccaccttaatccacatgccaactcaaaataatcttataagtattttctgcaattggttcatattgtagctatgaaataacactgctgctcttagtatgttcgcatttttgtgcaaaatttgctaccttctaactaaagttcaagatattaatattttcttccttgcaggagaatttgaagagacaaagatcttcggttgatgatgatctctatgaccatcctaagcattctcgagtagaagatatggatcagtatagtggagacgaatattctgactgatcaatagatatagatgaccatcatcctgcaccaacaaatttaatcagcacacatgaatctcaaagatctcatatttatgtgctgtggtgcctttataagtggttatagggtgcagggtggacgagaaaacataccttggtgcttctgggcaagaactaaattttgaagtgcagagtatgcaaaacaaggcagtgtaactggacctaaagactttggtctcagtagtgatggtggaggtctcaccatcattgtaaagaagtcttggggtcattctcaactatttgttttgatgatatagaccacc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0157100, RefSeq:Os08g0157100