Os08g0157400

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Revision as of 12:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0157400| Description = Zinc finger, RING-type domain containing protein| Version = NM_001067565.1 GI:115474866 GeneID:4344701| Length = 122...")
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Gene Name

Os08g0157400

Description

Zinc finger, RING-type domain containing protein

Version

NM_001067565.1 GI:115474866 GeneID:4344701

Length

1223 bp

Definition

Oryza sativa Japonica Group Os08g0157400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3325362..3326584

Sequence Coding Region

3325968..3326498

Expression

GEO Profiles:Os08g0157400

Genome Context

<gbrowseImage1> name=NC_008401:3325362..3326584 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3325362..3326584 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggttcccgtcggtgtgctactgcgtgatactgccgcagccgctggtgctggtgctgcagctgctcgacctgctgcgccacgccttcctgctctgcctctccgcgctcggcctcgccgcgccgccgctcccggacgaacaccccgcctacgcgccgcctccgccgccgccggcgtcgatggcggccctccccgccgacctcgtctgggcgttccagcccgcgccggagccggccgccatcaaggcgcgcctccccgccgtccgctacgccgacttcgtcaggtgccgccgcgccgccgcggcggccgcggcgtcgtgcgtcgtgtgcctcggcgcgctcgaggcgcgtcaccgggtgcgcgagctcggcaactgcgcgcacgcgttccacaaggcgtgcatcgacaagtgggtcgacaagggccaggccacctgcccgctctgccgcgccgccctcctcccctccgccgacgacgccgacgccgccgccatcgccgccaccaccaggcaccacctcccctccttctga</cdnaseq>

Protein Sequence

<aaseq>MGFPSVCYCVILPQPLVLVLQLLDLLRHAFLLCLSALGLAAPPL PDEHPAYAPPPPPPASMAALPADLVWAFQPAPEPAAIKARLPAVRYADFVRCRRAAAA AAASCVVCLGALEARHRVRELGNCAHAFHKACIDKWVDKGQATCPLCRAALLPSADDA DAAAIAATTRHHLPSF</aaseq>

Gene Sequence

<dnaseqindica>87..617#ctctctctctctctctctctctctaaagattccatctttgatttcgtttctctctctagaaggaaggaaggaggtcgccggcggcgatggggttcccgtcggtgtgctactgcgtgatactgccgcagccgctggtgctggtgctgcagctgctcgacctgctgcgccacgccttcctgctctgcctctccgcgctcggcctcgccgcgccgccgctcccggacgaacaccccgcctacgcgccgcctccgccgccgccggcgtcgatggcggccctccccgccgacctcgtctgggcgttccagcccgcgccggagccggccgccatcaaggcgcgcctccccgccgtccgctacgccgacttcgtcaggtgccgccgcgccgccgcggcggccgcggcgtcgtgcgtcgtgtgcctcggcgcgctcgaggcgcgtcaccgggtgcgcgagctcggcaactgcgcgcacgcgttccacaaggcgtgcatcgacaagtgggtcgacaagggccaggccacctgcccgctctgccgcgccgccctcctcccctccgccgacgacgccgacgccgccgccatcgccgccaccaccaggcaccacctcccctccttctgatccatgtcgccaagaacccatcttgcttagcacccaacacccccttccaccccaagagcaacaagggttccctcctcctttctccaccaatggatcaaatccaatcaaaatggaagaacacacaacacaagagaagagagatagagagagaaatcaatggaggaagaagatgagaggagagagagggggtgtgtgtggtggaggagtattattggtaggtgaggcactaattatgaggaggacaaggatggctacctgcactgcattggatctggtgaatttcagccctagctagctatagatccaacatctcctctcttcccttctcttctcttctcttcacttcacttcacatcaactttttctttgcttttcttttttctactttactttcttcttttgttgccttcacctcctttttgaaattttgctttctttctctttaatttttctccctctttttccttcttttttttgagggtttcctctccccttgtcattaacttaatttgtaaggggggattaagagagagagatgtgtacatacctgcctccactttgacaaatattggaataataatttataatgatgatgatgatgatgat</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0157400, RefSeq:Os08g0157400