Os08g0157800

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Revision as of 12:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0157800| Description = Conserved hypothetical protein| Version = NM_001067568.1 GI:115474872 GeneID:4344704| Length = 4465 bp| Definition ...")
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Gene Name

Os08g0157800

Description

Conserved hypothetical protein

Version

NM_001067568.1 GI:115474872 GeneID:4344704

Length

4465 bp

Definition

Oryza sativa Japonica Group Os08g0157800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3381542..3386006

Sequence Coding Region

3381822..3382463,3383069..3383266,3383728..3383903,3384028..3385050,3385823..3385940

Expression

GEO Profiles:Os08g0157800

Genome Context

<gbrowseImage1> name=NC_008401:3381542..3386006 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3381542..3386006 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacctcctcctccaccgccgccgccgccattcaatccgcctcgtcctccaccctctccccgcacgcggctcccttcgccctccccgtccgcccggcccgcgcccctctccaagatggtgatgtttctaggtcgatggatggtagcattgtggtgcatggattagataataaaattttaggagatgctcatccatcatcgtcgtcagcaacatcttgctttcgaacacaatcatttgacacagttttaccagcctccacatgtggagcgaacgcaagtcagccgagggaatggccagaaattggcagcgatgcagcttatccatcctcgatttgttctacttctgtggtattttcatatccttcagtcatgatggcctccaatcataaccagaaaaatcccttgtaccctgggatgggaagtaatggaagcagatgttcaacagtcaagatagaaagcccaccaaataaaatatctgaagccaataaaatcagttgtggtttaacgagcaagtcatctatgacaaaagatgttagtaaatccaacgaagatgctgtgaaaaatgccccctttccacaaattttggaagttggtatggagatctgctccaaagaggcaagccctgtctcccatacgaggcctcttcatatttcaactgctggctctgatccatgcgattctatggctgatggtgtgaaaacagaaccatcagaatgctatgtggattcaccatgttggagaggaagaggaacttcactttctcatcaaacgtcagtgacacagttaataaatcaagaatcagaggcttttgatgctggccaaaagaagagcactagcactgttcagcattgtgaggttctgaccgcatctcaaaatttggacactatcgagaataagcaaaaccaatcccaatctcatgttgaattgtctgtgtctatgaaatctggagacaatggtaaaaaagaggaagaagtttcccacaataaggagcttgagagtgcaaaacaatgtgcagcaaaatgcaccgcagagcagaaacacagtttggagctgagagataatagcgtgaagcgatctggtctaaactttgctgctcctgattttatcccttcatcagttgggaaatcaaaaattgtcaaagggtcctgttccacgacaggaaggaacacttctggaattctcaaggcaatggggaatttgtcagaaatgcttcgcgatagctgtttgttggatgaaaatgagctcgatgagcatgagcacactctcctccaatcagtaattgagaatcttcagacatgtattgataggaaaaaaaagggtcccattaatgatgatggctctaacaaggcaggactaagggctcctcattctcagtccgccgttttaaaatcttatgcaggggactacagaggtagttgtacaaccaatggtggaaatggcataactgtaaataaatctgtgggtcctactcgtgtgctcagtgattttgggaagaacagcttgacatggtcccagccttcattcaacaatattccaaggatgatatcctgtgaagaagaccactcacagattctcatttataagaatctgtggattgatgctgagcgtacaaattgtgagttgaagtatctactgaaacagaaccgtatcaaaattggccaagaatccagtatggctcatattggtggtccaagaaatccttctttccaggcatgtgatttaggtgcaggtccaagtaattcttatggagctgccatatcttacccaccaactctgagttttcctaagggtgattctactgaagagacatcaagagcaaggaacactgacctcctttacactggtgattgcatccggttaggagataacagtgtgcctagctgctctgcaagcaccatcagccatcctactcgaccgaataattttcagggtgaccttttaacaggcttggaggaaactggcttgcatcatcatgctcagccagtaccgcaactcgcaccgagcagagttcacagggaaccgagaataagcactatggatgaagcgtcaggccactcatgcttcaccggagcagacggcattttgagtggcaattctgaatatggcttgtcatcagattgggagcatgttctgaaggaagaaatcggctggagctga</cdnaseq>

Protein Sequence

<aaseq>MTSSSTAAAAIQSASSSTLSPHAAPFALPVRPARAPLQDGDVSR SMDGSIVVHGLDNKILGDAHPSSSSATSCFRTQSFDTVLPASTCGANASQPREWPEIG SDAAYPSSICSTSVVFSYPSVMMASNHNQKNPLYPGMGSNGSRCSTVKIESPPNKISE ANKISCGLTSKSSMTKDVSKSNEDAVKNAPFPQILEVGMEICSKEASPVSHTRPLHIS TAGSDPCDSMADGVKTEPSECYVDSPCWRGRGTSLSHQTSVTQLINQESEAFDAGQKK STSTVQHCEVLTASQNLDTIENKQNQSQSHVELSVSMKSGDNGKKEEEVSHNKELESA KQCAAKCTAEQKHSLELRDNSVKRSGLNFAAPDFIPSSVGKSKIVKGSCSTTGRNTSG ILKAMGNLSEMLRDSCLLDENELDEHEHTLLQSVIENLQTCIDRKKKGPINDDGSNKA GLRAPHSQSAVLKSYAGDYRGSCTTNGGNGITVNKSVGPTRVLSDFGKNSLTWSQPSF NNIPRMISCEEDHSQILIYKNLWIDAERTNCELKYLLKQNRIKIGQESSMAHIGGPRN PSFQACDLGAGPSNSYGAAISYPPTLSFPKGDSTEETSRARNTDLLYTGDCIRLGDNS VPSCSASTISHPTRPNNFQGDLLTGLEETGLHHHAQPVPQLAPSRVHREPRISTMDEA SGHSCFTGADGILSGNSEYGLSSDWEHVLKEEIGWS</aaseq>

Gene Sequence

<dnaseqindica>3544..4185#2741..2938#2104..2279#957..1979#67..184#ctcgttatttacgactcttgccactctccgccgccccaccaaaccccaccggcgacctcaccggagatgacctcctcctccaccgccgccgccgccattcaatccgcctcgtcctccaccctctccccgcacgcggctcccttcgccctccccgtccgcccggcccgcgcccctctccaagatggtaacaacctgccctcctcctcctcctcctcctcctctaccctcttcttgattgtctctcatgccccgccaccgcgcgttcttcggctggtacggcgtgttcttccgctccctgatgatcggcaccgtcgatttggtgcgcggggggggggggggggggggctttgcgaaggatccggtctttgtgtgtggttcattcgcgtcaagtgtgtgaggagtgaggtttttcgattttcagttggtagaatttagttgagattaagtagtacctgaaaccgatcggcgatcatcaaaatttttgttattgttctgcacttttgaatttacttactctctctcggtttcatctgagagatgagtttgttcattgagtatcaaatcattggcgcaataatgtggatgtttatttggggctatttgcgccgcagtctgatttcatgcgattatcctatcttattttcagttagtattacttactccctccagttccataattcttgacgttttagacaagtttaaagttaaacttttgtaactttggttgttaataactttaaaagtatttagtttaaaggaacaacatttatagatttatctttcaaagtactataagaaaagtaaacatgcatttatttattgtatatattataatagaaaaataaaatcaaagatatattttggagattgtgtcattgtccaaaacgtcaagaattatggaacgggagggagtatgcatcatggcattgatttcacgtttgttcttggatgcttaggtgatgtttctaggtcgatggatggtagcattgtggtgcatggattagataataaaattttaggagatgctcatccatcatcgtcgtcagcaacatcttgctttcgaacacaatcatttgacacagttttaccagcctccacatgtggagcgaacgcaagtcagccgagggaatggccagaaattggcagcgatgcagcttatccatcctcgatttgttctacttctgtggtattttcatatccttcagtcatgatggcctccaatcataaccagaaaaatcccttgtaccctgggatgggaagtaatggaagcagatgttcaacagtcaagatagaaagcccaccaaataaaatatctgaagccaataaaatcagttgtggtttaacgagcaagtcatctatgacaaaagatgttagtaaatccaacgaagatgctgtgaaaaatgccccctttccacaaattttggaagttggtatggagatctgctccaaagaggcaagccctgtctcccatacgaggcctcttcatatttcaactgctggctctgatccatgcgattctatggctgatggtgtgaaaacagaaccatcagaatgctatgtggattcaccatgttggagaggaagaggaacttcactttctcatcaaacgtcagtgacacagttaataaatcaagaatcagaggcttttgatgctggccaaaagaagagcactagcactgttcagcattgtgaggttctgaccgcatctcaaaatttggacactatcgagaataagcaaaaccaatcccaatctcatgttgaattgtctgtgtctatgaaatctggagacaatggtaaaaaagaggaagaagtttcccacaataaggagcttgagagtgcaaaacaatgtgcagcaaaatgcaccgcagagcagaaacacagtttggagctgagagataatagcgtgaagcgatctggtctaaactttgctgctcctgattttatcccttcatcagttgggaaatcaaaaattgtcaaaggtcagtctaactccataaaagtgctttatatgatcgtgcctgtctcatgatttgtatttcaagttattatatcctttattttacttcatattcacaaccatgtttaaatatttgtcacattcagggtcctgttccacgacaggaaggaacacttctggaattctcaaggcaatggggaatttgtcagaaatgcttcgcgatagctgtttgttggatgaaaatgagctcgatgagcatgagcacactctcctccaatcagtaattgagaatcttcagacatgtattgataggaaaaaaaaggtgcattgtttgtggtctttcttttagttcttactagattaggctttctgtaaaatgcgttactttgagcatgtgcacaacctgcaacttgtattttattggcatcttccttcatacaactctttcagaagatttcatcagctcatccattttgttattagtaaaggattagtttaactgttagtttattattgttagtcctcacatgtgtaggataacaaagtttatgattattgctggagaatgcttcccaaatgcacatgcacaatcaccaccatcaaatgttaccttgagtagcaaagtccaaaactggaacaaacaatcccaccttctcttcattatgatgtccttacacacaaacactttggatgggtaggacagtacatatacccacatgatgcatttccatttgtgactttctaaatcagtgatcccataatatttttttcaattctttctagggtcccattaatgatgatggctctaacaaggcaggactaagggctcctcattctcagtccgccgttttaaaatcttatgcaggggactacagaggtagttgtacaaccaatggtggaaatggcataactgtaaataaatctgtgggtcctactcgtgtgctcagtgattttgggaagaacagcttgacatggtcccaggtattcttttgtacacatagtagctcgtgctgtttgtgaaaaatgtgcagagggttttccaaaatgttctttaaaatctttataagcacaaaaaggtcagtagtaatttttacaagatacagtatatgacagagtttgagcctgcaacattttgttaggaatttaccccctttcctttgtctataaccttcttattagttgagtaagttgcactttgcaatgggtaaagtgtaccttgttttgctttgcaccagatttagcacatactttcaatttgcgcttattgatttcacttaacacctggatgcatcattcaatctatagaaatgtcatggcatttcataaaatctcgtaaaacatggtctaaattcaaagagtttcacaggttgtactcatatttttcgagatttctcttcaattatatgatgctacctagtgccatgtgaagcttatttcaatataccctagtttaaagtgaaagtatgaactaaaactagtgtaaagtgaaacaaggtatactctacccggtaggctggtacaatgtgcaatttactctcatttagtctagtacactttcttacaagctattattaatgtttggccagccttcattcaacaatattccaaggatgatatcctgtgaagaagaccactcacagattctcatttataagaatctgtggattgatgctgagcgtacaaattgtgagttgaagtatctactgaaacagaaccgtatcaaaattggccaagaatccagtatggctcatattggtggtccaagaaatccttctttccaggcatgtgatttaggtgcaggtccaagtaattcttatggagctgccatatcttacccaccaactctgagttttcctaagggtgattctactgaagagacatcaagagcaaggaacactgacctcctttacactggtgattgcatccggttaggagataacagtgtgcctagctgctctgcaagcaccatcagccatcctactcgaccgaataattttcagggtgaccttttaacaggcttggaggaaactggcttgcatcatcatgctcagccagtaccgcaactcgcaccgagcagagttcacagggaaccgagaataagcactatggatgaagcgtcaggccactcatgcttcaccggagcagacggcattttgagtggcaattctgaatatggcttgtcatcagattgggagcatgttctgaaggaagaaatcggctggagctgaagggatctgccagccagattgctacttaatttgtacatatatatatgcttgagtaattagagatgcaggaattctgctcatgggtttattttgagtttttttgtctgataaggctgaggatagcaggcactgcttggcaaaatggtgctttccagcctctgaaaaaacagcaccacttttatgtatgcatgtctaattagcttcttatgaacaattgtataagaactcctaagtcctaacctagctgcacattttggccatggcagtgccaaattgtcac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0157800, RefSeq:Os08g0157800