Os08g0158900

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Revision as of 12:47, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0158900| Description = GTP1/OBG domain containing protein| Version = NM_001067574.1 GI:115474884 GeneID:4344710| Length = 6072 bp| Definit...")
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Gene Name

Os08g0158900

Description

GTP1/OBG domain containing protein

Version

NM_001067574.1 GI:115474884 GeneID:4344710

Length

6072 bp

Definition

Oryza sativa Japonica Group Os08g0158900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3431157..3437228

Sequence Coding Region

3431405..3431515,3431626..3431820,3431959..3432071,3432468..3432504,3432617..3432688
,3433196..3433309,3433476..3433547,3433690..3433728,3434687..3434761
,3434908..3435021,3435096..3435160,3435274..3435394,3436289..3436410
,3437057..3437198

Expression

GEO Profiles:Os08g0158900

Genome Context

<gbrowseImage1> name=NC_008401:3431157..3437228 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3431157..3437228 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgagcggcagcaggaggccgcggcttcctcctccacccgcggccgccatggcgagctcccgcgactcctccttgtcctcctcctccagccaccgccaccgcgctcgcgaggcggcttcaccaccgacgcctacctgaaggtattttgtccaccctggaacgaggtgtttctacactgcatttgcgttgttgggttcactgtgcaacatgtggtgttacgttacatgacatatcacaggcagaacctgtgaatggagcaaagtccgaccttgttcaaaagcatgagaaggtaggtgcatttcagagaataccaatggtgatgcctgcaactgatatacttatgtcagcacaaagaaaatcaagaaatgtaccacctacaaagggtatagcaaatattgctaaacgtgaaaggaacaaaggggcaaaacaacttgatgccttaatgaaagaaatttcagtacctctgagaacatatacagaaaacttccctaagaggagggatcttcacccctatgagagatctctcattgagttgacttttggggagggatattacgagaaggtaatagcacgagtggatgctctcaggaaaaagattaattctgtcgggaagcaacatgcttctgtctgtgctaagtcattaacgaagcgtgaagcagaggagcgactcagtgaggggcggaagaaacttgaggaagctttcgagcatgggaagtgggtaattgatgatttagtaaacattgcaaagactttgcgttctatgccagttgttgatccacatatacctacactttgtcttgttggatcacccaatgtggggaagtcatcattagttcgcatattatcgtctggaaaacctgaggtctgcagctaccctttcacaacaagaggtattctaatgggacacattgtatccaatcatgaacgttttcaggttactgataccccaggacttcttacaagagatgatgatgaaaggaataacattgagaaattgacccttgctgtcctttctcatctaccaattgctgtcctgtatgttcatgatttatctgaggactgcgggacctcagtggccgatcagtacatcacatacaagcatataaaggaaagattcggtgatcgcttgtggcttgatgttatatccaaatctgatcttttggacaagaaaacatcctcagaatttgatgatgctgatgatgaagtagggagatacagaagattcgggccagaatgtgccatccgagtatctgtgcagggccaagttggagtaaaagagctaaaagagaaggtgcatcagctactaacctctcagatgtctcggatcaaagctggcacaatctatcaggaaacccagagaacggatgataatgctcccgggcaaacttag</cdnaseq>

Protein Sequence

<aaseq>MRAAAGGRGFLLHPRPPWRAPATPPCPPPPATATALARRLHHRR LPEGILSTLERGVSTLHLRCWVHCATCGVTLHDISQAEPVNGAKSDLVQKHEKVGAFQ RIPMVMPATDILMSAQRKSRNVPPTKGIANIAKRERNKGAKQLDALMKEISVPLRTYT ENFPKRRDLHPYERSLIELTFGEGYYEKVIARVDALRKKINSVGKQHASVCAKSLTKR EAEERLSEGRKKLEEAFEHGKWVIDDLVNIAKTLRSMPVVDPHIPTLCLVGSPNVGKS SLVRILSSGKPEVCSYPFTTRGILMGHIVSNHERFQVTDTPGLLTRDDDERNNIEKLT LAVLSHLPIAVLYVHDLSEDCGTSVADQYITYKHIKERFGDRLWLDVISKSDLLDKKT SSEFDDADDEVGRYRRFGPECAIRVSVQGQVGVKELKEKVHQLLTSQMSRIKAGTIYQ ETQRTDDNAPGQT</aaseq>

Gene Sequence

<dnaseqindica>5714..5824#5409..5603#5158..5270#4725..4761#4541..4612#3920..4033#3682..3753#3501..3539#2468..2542#2208..2321#2069..2133#1835..1955#819..940#31..172#ggtgtagttgatccgaagttgggagtggagatgcgagcggcagcaggaggccgcggcttcctcctccacccgcggccgccatggcgagctcccgcgactcctccttgtcctcctcctccagccaccgccaccgcgctcgcgaggcggcttcaccaccgacgcctacctgaaggttggtcctccttagacgcctctggtactgtagtcttcgccgtccccgcggttcgcccgcagggtgttcgacgaaatgcccgcctccggtttagggctgttttggttgcatgagtcgcgcgcatcggcacatgctgcatctctggctctgcggatccccttaggtgcgttgcggaagaccttgtgctgagcacgttcttgttcatgggagactgtgtgtgatttccggttacatgctttccgccaaaccaatcggacctttttttattagctactgtgagcatgagacggcgaggatgtttgaattcttgtgtagctctcgttcctgctcttccctgggcactgactgccttatggggcgctggggtgttcaatgaaatgccccgggcaagctggagctctcagtctgaatatgcttgcaagcgccaaaacctttgtgtcgctgcaattatatttttcttccccacattatctattcttgttgagggaaactatggcgggcttacgctaacctgaacttttattgatcacgaaaatgggttaacacaagcaattgagcatcgaattaaggagggcagggagagggaaacacagtatgtcttctgaaatagcattatgaaccttctctattcattcacgtaaatcaggtattttgtccaccctggaacgaggtgtttctacactgcatttgcgttgttgggttcactgtgcaacatgtggtgttacgttacatgacatatcacaggcagaacctgtgaatggagcaaaggtatgttactttgagaaaccttcactcagcatgttgattcatctctatttttaaatctgagtttcggtgtatcctcctttgctcaaatgcgatgagtacttctatatgactaattctgattgctcctgctttgtttatttaaaatactactatactagtgtgcattatttattcatttcaagttctcaaatataatgtttcatgttcttaattggcaagaatccccatttatctgttagcttttgaaatggtgtttatctgctgctaaaactgaatgtctgctcaagtttttttttttttttacccaaacctcttgggcatgccctagaacttgcgtccaggttagagatgctctttccccatgatttcgatgctttgtttataaaatataacagaaattgtgctgtttatttagtacaatttgtgggacataacctgttcattttcacatgttgtatgtgtgtgttcgtgcgtgtgtgagtttgtccttatgtcctctgcatagtggctatacctatatgatacaagtacatcacatttaggatgctaagtaataatttgtgactatttgagttcttttgtaagtagatctatctacaagaactgttgtcctggaaggtaaccagttctaaaggacgagtttattagtagcataatatgtgaacttcagcaaatgcaacaagtgatgttctggtaggatgtaattaattcatcacaccacaagctgagatgtggttggtacatgtctataagttaacactatacacaagttcacataagaataatttcctctgttagacatgttagttccatcagcaattcagtatatttacatatttaataggatacaccattccatttactttatattttgctaattacatttgttttcagtccgaccttgttcaaaagcatgagaaggtaggtgcatttcagagaataccaatggtgatgcctgcaactgatatacttatgtcagcacaaagaaaatcaagaaatgtaccacctacaaagggtattattccactgaccatctattgctctttttttttccctctgaatcacccatcacatttcacatggcattcagtgtcaccaagcttgttttgcaatccatatgttctgtaggtatagcaaatattgctaaacgtgaaaggaacaaaggggcaaaacaacttgatgccttaatgaaagtaagccctctactctgttaacctgccaatcaaagtaattcatctgggttattgacagcagttttctttctcaggaaatttcagtacctctgagaacatatacagaaaacttccctaagaggagggatcttcacccctatgagagatctctcattgagttgacttttggggagggatattacgagaaggtatggctctaaaatgacttgccactctcgatcagtgcaagaatcatcagagtattatctatttacttattcaactaaagtctatttttcatggaaattttgcattgtttgttgagttattataatctttagtagtgccttgacaggtaatagcacgagtggatgctctcaggaaaaagattaattctgtcgggaagcaacatgcttctgtctgtgctaaggttagagtagatgttgattttttttaatgctactacgatttttatacatgaaaataatttacccttgccttaagtactgttgagttctcgaatcaagcatttaatagataattaatatctcaaagcaactattaacatgaatttatgaaaatacaactattagcatctcaaagcaagaattttagcatactgaattctctgtagaccttaaacatgcaaagatattggacagttgcattctgataggataggataggagtatgtagtaacaaaggatgaaggtttgttgatactcactcaacaccaacatactcattaagccattttataaggaatgagagcaatgtacagcaatgtgcacggtttttttagtattctaagtattttgacctagttgaaccccaagccttgtattgactggcacatgatttaggcctgtttggaacagattattcatcagattatcgttgtggattatctaattgattatagggattttttttagaaataaacttaacaaatagctcagaacaggtggtctaagcaatgcagtacaagaaagtttttttgaggaaacatatttttagaggtgtagagcaatctgtggaaataatccagtgaagtagctgagaaaaatattgtttgatcctgctgatgctggtcatagtcaaaattccataggacccgtttttgtcaaaacaaaaaaagggcatgtcctatatcaaacagacttctcttacattagaccaataatgaccaatcaaatgttttttttttaagttgtaaggactaaggaagttgtgtatatattcagtcttcttcatgatatctgagtatgatgcatgactgggcattgacatgaactgccacagacaagccctttaactaccttgaaacattctttcttctatcgaaatagcatataatttgatccaggttgtatgtctgaccttgacagtcattaacgaagcgtgaagcagaggagcgactcagtgaggttagttcatgttcgagcagacataaacgaatggcctctgattcataccttgtgttttatagtgctcttgttgaaagtttctagttttcatgttttactaatttgatgctttacaaatttgtctgtattattaattctctaggggcggaagaaacttgaggaagctttcgagcatgggaagtgggtaattgatgatttagtaaacattgcaaaggtaggttttgatagcttaatttactataaatttggtgtgaaacttccaagagaatggttattatgtctcatactctacttttgtttacagttattcatgcttctaagattgctattgcatttatggcatgcttaagcacttctgattgattgatgatctatggcagactttgcgttctatgccagttgttgatccacatatacctacactttgtcttgttggatcacccaatgtggggaagtcatcattagttcgcatattatcgtctggaaaacctgaggtaagtatatccctgtataatgcttagttggagtgctgtttggtggtagggagtagggacagcttcatgaattatatattgctagtttgcaattgtatgaaggttgtagccatcacttttgaactattacatggcttatagttctcgaatataagttgtcagaactcatgcctcactgattattgctcctatttcttaaaattccactccctcattggcgaaacaataaataaagcaactaagcccaagtcttgttttttcatcacgataagactactctaaggaaaatatataatatttgtttgtgaatgatgacttctctatgtttaacaacagatgattaatagcatattgtcaaaaaatttaatttactttagctcatgcttttaggtatgtctttatttgttctctattctcaatataattgatatctctatggttttattctactctgttttctattttctgtctaattttcgatgccttataccattcagctactttcaggtctgcagctaccctttcacaacaagaggtattctaatgggacacattgtatccaatcatgaacgttttcaggtacaaagatctgcatctccaatttgcatatatacctgaaaaaaataaaattgccaaagcttctttcctcttttccatctatatgttactgaccaagaaaattattttgcaggttactgataccccaggacttcttacaagagatgatggtgagttagttttcctggccttgtagttatttactggagttggaccaactctgtatagcgtttgtagcattgttcttacaatcttagtgaaagagattccttacttccttctcaccctgtgcttgtttgaagaaagatacacttctcacaacaaattgatgtctagattaagatacttttttttttcaatacttgatcagtgtataagcctttgtagactcaacttactgcttttaaaatataacctatgattttatactcagtagggtggggtcttgtacatttttcactgtattcttaacaagtttttgctgtgctactaatgagtgatgctatatgattccatacattttatttagcatttgttgtaatctattttttatctgtggcaaacagatgaaaggaataacattgagaaattgacccttgctgtcctttctcatctaccaattgctgtcctgtatgttcatgatttatctgaggactgcgggacctcagtggccgatcaggtaaactgtttatttacttcatagattttgttgtcttctgctcattctagccccttgacaagatcaaagagactggacagggcaaatgacaagttttgtgttctgacttgaaaacatattttccctctctttttgcagtacatcacatacaagcatataaaggaaagattcggtgatcgcttgtggcttgatgttatatccaaatctgatcttttggacaagaaaacatcctcagaatttgatgatgctgatgatgaagtagggagatacagaagattcgggccagaatgtgccatccgagtatctgtgcagggccaagttggagtaaaagaggtaagcaatcagccaatcctcatgacattgtcactcaactcagaaccatcaattcaatagtacaaccaagaacttgatctagactaacgtatgaatttctcacccctcagctaaaagagaaggtgcatcagctactaacctctcagatgtctcggatcaaagctggcacaatctatcaggaaacccagagaacggatgataatgctcccgggcaaacttagattatggaaaggttatgtacacatttatgtaaaccttttaactcgtgctgacagtcggtgcatctaatgtagtagtacctggaattttgtacggaaggagaaaattttgggcctgttcactttgatgaaaaaaaaaaaaaaccttactaaattttggcattgccaaattttggtatagttgccaaaattttggcgaacttgtcaaaattttgacatgatttcttatatagttaccaaaatttggtagc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0158900, RefSeq:Os08g0158900