Os08g0161800

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Revision as of 12:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0161800| Description = Similar to Cholinephosphate cytidylyltransferase| Version = NM_001067587.1 GI:115474910 GeneID:4344725| Length = 195...")
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Gene Name

Os08g0161800

Description

Similar to Cholinephosphate cytidylyltransferase

Version

NM_001067587.1 GI:115474910 GeneID:4344725

Length

1953 bp

Definition

Oryza sativa Japonica Group Os08g0161800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3618577..3620529

Sequence Coding Region

3618764..3618853,3618950..3619060,3619136..3619204,3619283..3619438,3619527..3619569
,3619722..3619816,3619925..3620039,3620323..3620489

Expression

GEO Profiles:Os08g0161800

Genome Context

<gbrowseImage1> name=NC_008401:3618577..3620529 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3618577..3620529 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagccactgaaggacgcggacgcgcaggagaaggcggcgccgccgccgacggagtggtacgacccgctgtcgtcgccggggcggccggtcagggtgtacgccgatggcatctacgacctcttccacttcggccatgcccgcgccctcgagcaggccaagaaatcattccccaacacatatttgctcgtgggctgctgcagcgacgagatcaccaacctttacaaaggcaagaccgtcatgactgaagacgagcgctacgaatcgcttcgccattgcaagtgggtggatgaggtgataccagatgctccatgggttatcaatcaggagttcctagacaagcaccgcatcgactacgtcgctcatgatgctcttccgtatgcggacaccagtggagctgccaatgatgtctatgaatttgtgaaggccgttgggaagttcaaggagacgaagcgcaccgagggcgtctcgacgtctgacatcatcatgaggatcttgaaggactacaaccagtacatcatgcgaaatctgacccggggatactcccgcaaagacctcggtgtgagctatgtcaaggagaagcaacttagagtaaacatggggatcagcaagctaagggagaaggtgaaggagcatcaagagaagtttcacagcgcggcaaagatagctggaagcaatcctgtggagtggatggagaatgccgaccgttggatcgttgggtttcttgaaaagtttgaggaaggttgccacatgatggaaaccgcgattaaagatcggattcaggaggggctgaagaggcaaagcaggtcggaccccaacctttctggggaggattccgactcataa</cdnaseq>

Protein Sequence

<aaseq>MKPLKDADAQEKAAPPPTEWYDPLSSPGRPVRVYADGIYDLFHF GHARALEQAKKSFPNTYLLVGCCSDEITNLYKGKTVMTEDERYESLRHCKWVDEVIPD APWVINQEFLDKHRIDYVAHDALPYADTSGAANDVYEFVKAVGKFKETKRTEGVSTSD IIMRILKDYNQYIMRNLTRGYSRKDLGVSYVKEKQLRVNMGISKLREKVKEHQEKFHS AAKIAGSNPVEWMENADRWIVGFLEKFEEGCHMMETAIKDRIQEGLKRQSRSDPNLSG EDSDS</aaseq>

Gene Sequence

<dnaseqindica>1677..1766#1470..1580#1326..1394#1092..1247#961..1003#714..808#491..605#41..207#aaaaaaaaaaaagtaggctttgggatcgccgccggtgacgatgaagccactgaaggacgcggacgcgcaggagaaggcggcgccgccgccgacggagtggtacgacccgctgtcgtcgccggggcggccggtcagggtgtacgccgatggcatctacgacctcttccacttcggccatgcccgcgccctcgagcaggccaagaaatcgtaagcttggattatccaatttatttctaaattttttttcttgagttaccaagtatctggttgaataatcaaggaaaaaacatgatcaaattttagattcaaacagtgcattttcttgtgtgtttaatcaaccaagaagaaactttgtaggactttggtgcaatgcaatcggcagttgcagtttacatttttgatttctgaagatatttctttcagtttctgaattttgacatcgatttggcatccatttgcatcacatgatgttctgagttgctctgaacagattccccaacacatatttgctcgtgggctgctgcagcgacgagatcaccaacctttacaaaggcaagaccgtcatgactgaagacgagcgctacgaatcgcttcgccattgcaagcaagttttcacctcctctattgcacttgtgccattcacacatttggagatttttttttaaaaaaagaacaatcttaccattttgttgttaactaaaaaaatgtgaaggtgggtggatgaggtgataccagatgctccatgggttatcaatcaggagttcctagacaagcaccgcatcgactacgtcgctcatgatgctcttccgtaagaacacagttattatgcagaacaaattgctcaaaaatagttatgtagaattgcaacaacattggaccttcatatatattttcatgattgtttgtatgtgtaaaatagcagaaacaatgtgtgtaactaacttcatgtgattgtttcaggtatgcggacaccagtggagctgccaatgatgtctatgaatttgtcaggatctctgaatcttctcatgtttcaacaagcatttctgatggctataggtagctgagtgcctgatgtctgaatgttcgtgcaggtgaaggccgttgggaagttcaaggagacgaagcgcaccgagggcgtctcgacgtctgacatcatcatgaggatcttgaaggactacaaccagtacatcatgcgaaatctgacccggggatactcccgcaaagacctcggtgtgagctatgtcaaggtgagtattccatgatgaacttctccaagtgaagaagaaaaacaggcactgaattatgttgttttactgtatgatcaggagaagcaacttagagtaaacatggggatcagcaagctaagggagaaggtgaaggagcatcaagagaaggtgatcaagtaaattgaaaaatcaaatgatcttacaaaattttggtactaactttgctgcataatacatatgtagtttcacagcgcggcaaagatagctggaagcaatcctgtggagtggatggagaatgccgaccgttggatcgttgggtttcttgaaaagtttgaggaaggttgccacatgatggtaagtggaggaattattacattttgtcaatcttgtagaactttgacaatgaacagtgcattgccacatgatctgtttttttttttcatttgacaggaaaccgcgattaaagatcggattcaggaggggctgaagaggcaaagcaggtcggaccccaacctttctggggaggattccgactcataatggatcctgtaatatccagatcaaactgggaagagaaaaaattgtggagatcatttctagccttgtgtgagattagcctcatgttgtaggacaattaaagtgaccgtgcatggtttgtttgtaccaaaaggttttgtacttctgagaacaataataatagttcgtgcaattactgctcaaggttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0161800, RefSeq:Os08g0161800