Os09g0413200

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0413200| Description = Abortive infection protein family protein| Version = NM_001069697.1 GI:115479136 GeneID:4347046| Length = 3660 bp| ...")
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Gene Name

Os09g0413200

Description

Abortive infection protein family protein

Version

NM_001069697.1 GI:115479136 GeneID:4347046

Length

3660 bp

Definition

Oryza sativa Japonica Group Os09g0413200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15334520..15338179

Sequence Coding Region

15336879..15336955,15337046..15337138,15337259..15337350,15337641..15337747,15337971..15338012

Expression

GEO Profiles:Os09g0413200

Genome Context

<gbrowseImage1> name=NC_008402:15334520..15338179 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15334520..15338179 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tctatttctctggactttttttttcagactgactcgttagttcttttattgccattaatcggctcatcaagtgccagcactgcttttctggtgggcattactggagttctagcaccaattctggaggagactgtgtttcgaggatttttaatggtgtccttgactaagtggtttcctactccagtttgcatacttgtcagtgctgctctatttgcctttgctcatctgacacctggacaattcccacagttgtttatacttggtgttgcgttgggtttttcatatgctcaaacccataatcttctaactcctatcacaatacatgcattttggaactcgggagtaatattactgttaacctttcttcagctgcaagggtatgatatcaaggagcttttgggagcatcttga</cdnaseq>

Protein Sequence

<aaseq>SISLDFFFQTDSLVLLLPLIGSSSASTAFLVGITGVLAPILEET VFRGFLMVSLTKWFPTPVCILVSAALFAFAHLTPGQFPQLFILGVALGFSYAQTHNLL TPITIHAFWNSGVILLLTFLQLQGYDIKELLGAS</aaseq>

Gene Sequence

<dnaseqindica>2360..2436#2527..2619#2740..2831#3122..3228#3452..3493#gagccagcgagcactcgagctgagagcaaagaagcgcatccttctcatggcggcctcctcgtcgtcggcggcggcggcggcgttgtcgccggcgatctctcttcacctgctccggccgctcccgtgcagagccgtactcctgtccaggcaacggaggccatttccatcgccaagagctggctgcctggcggcggtaagagctcagcggcggtggctccggtcgccggagatcggccggtggaggaggcgcgggggctacgcctgcctctccttcaactccggcaataagccgcctccgccttccagtgaggtgactctacgccgccgccgccgcttcagattttgaggaatttaaatactagtagcttcttggaagaacacacctctaagatctttctttctttctttctttcttcttttttttcttttttttttacggatgcatcggtagaatggcaaatgtgcatttgataggagtatcttattatgatggaaaacatgtctagtttagttggatgtaagtattcctctcttttgcgatggtttctcttgctgaagattttgtgacataatttggatgtgagcagaattcagacgaatggccaatccttcgccgatgggatgtgccgtgggagtggcagacggtggtgctcaccatggtgggctgtggagtaaggtactcctaaacttttgtaccctatgctggttagtgttttagtgatgtctatctgctattgcaatgctgcacatagtattggatttggagctaattatgaaaagaaaattccatatgttcataacttagaattggcagatacataatgctcaaatttattgctctttacagtattttagtgtattcaatcatcgacagctctattgaagaaagctttttctgaatgttctttagacagctttgttctgacaggattggttgagcaatcggttttgacgtatgtggggtttagagctgtcgaggcaacggtagatcagaaggcagaaatacttttccttggacaactgtacgaatccaagcacttgctgtttttttttttttttgcattcttcaaacaatggatactttgacagttgccaaagtatttatcattttcttttcactgtcttaagcagtagcgtgacagcagttgtgctgggtgttgtatatggcatcaccaataccttccgaccactgccagatgatatatttcgttatggtcaggacatgatattctttccatgttacttacaatagatttgatcttgtgcgaagagtacatcgtgcattctttttcagaaaatattttctctactgtggaaaattttctacaattctttagtgcaattggattcaccctataactaagtgcgtggcatagcctcattttcattcggcactgcctttcatgcttaagtcatgatggataattttgttttacaacttctgctttttctgaataagaaataagcatatctaactagcaacttttgctgaatttgcagatattaaagaaccattcaagcttcaaaatggctggcttctgtgggctggagttggtctctttggcgctataatttctattgctttagttggggttgctatgacttatctgaatggtgaacctccagaaagagaggtcaggccttttacatactgtactatatagatttttctcaggccatacaattttattcccatttaattaattattacctctcaatctttagtttttaactcacattgttttaatcccattcatcattaacctctaattcaatttgttcagcaagaaaaaaaacacatcttggaccgcttaatattcattaaacaataacctataacaatatgccaaatggagcaattcatgcaatttgtattagaccattgtctttgattacccaacccttttggcttgccttgcatgaccctaggtcttatctaatcacaatcttctcatgtatggactggattaagctgattgtgattaaacaatgacaactcaaggctatcatatggtcacttgtgcaagattcagatggtagggaagccagaaagataggttttccatgagtagcataggaattagcaaatatgcctattctctttggtttgagatgagacagcataattaggaacagtttgcggcataattaagatggaatgcaccctttgataaagtgaagcttcatacacaaggtttattcaatgctttgactgacaagcttatgtggtaaggcctcactttacattgataggggcttacgcttttccaaattgaatctcaacatgttttgtgtacttacctcctgttatactgattaccttttttcagtgtgctgtttcttgagtcctgattgctgatctatttctctggactttttttttcagactgactcgttagttcttttattgccattaatcggctcatcaagtgccaggtatcatccatccagttttcagtgggtttatgcctttatacctggcagtcataacctgactttgtcttcaactttttaatatattattagcactgcttttctggtgggcattactggagttctagcaccaattctggaggagactgtgtttcgaggatttttaatggtgtccttgactaagtggtaaacaaacatatactatttagctctttttagtagcttcctttcacatgcttgcatatagcaaattggtatgtacagtttgcagttttgcttgtttttaacagtttgctttgtatacaggtttcctactccagtttgcatacttgtcagtgctgctctatttgcctttgctcatctgacacctggacaattcccacagttgtttatacttggtaattttatatgtcaatttagaaataagatataaaaaccctgtgaattccgtgttttggcgaagtgcatgaatgcatttggttatcaacaaagttgatcacactaaagtgtagctgcctcgtggtgtcttgcatttgtgacctcttgttagaaagatgatagatgcaaaccctcagtgtgatactatgatcaatttatgaccagtgattttcttttggaaactatcgaagtatttattacattgtgagattattattccatttccataacatttctgattggtatgcaggtgttgcgttgggtttttcatatgctcaaacccataatcttctaactcctatcacaatacatgcattttggaactcgggagtaatattactgttaacctttcttcaggtatgtcttatactccaatttgtcagcatattcattcttgatcaagatagggttgagttgtataacttgcagagaattgcatatgaatagggtagttatctgatgattgtctatttatgttacttggttatttcagaatttagatggcatgtactggcatattaatttcatgcagtagtaactatgagatgtaactgacatgtataactttcaattgcttcagctgcaagggtatgatatcaaggagcttttgggagcatcttgaaggctttgactgatcagcctacggctttgtgcatatgctttagtaacttgatcaaagatacttgaaaagaacaatgggttctcctttattttactgttctctgtaatttcatgtttcccgtaactcccagaagtaaattacgagcgaaatatattgtgtttgtactc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0413200, RefSeq:Os09g0413200