Os08g0162600

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Revision as of 12:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0162600| Description = Rubredoxin-type Fe(Cys)4 protein family protein| Version = NM_001067595.1 GI:115474926 GeneID:4344733| Length = 2332...")
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Gene Name

Os08g0162600

Description

Rubredoxin-type Fe(Cys)4 protein family protein

Version

NM_001067595.1 GI:115474926 GeneID:4344733

Length

2332 bp

Definition

Oryza sativa Japonica Group Os08g0162600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3693308..3695639

Sequence Coding Region

3693345..3693443,3693673..3693867,3694566..3694732,3694923..3695004,3695111..3695179
,3695286..3695456

Expression

GEO Profiles:Os08g0162600

Genome Context

<gbrowseImage1> name=NC_008401:3693308..3695639 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3693308..3695639 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgccacactctcctctgctcctgccccctccaagcactgctccattgtcagagcccagcactcccctcccccttccatcctctcatcatcaactaagacggccttccatgggctgtcactggtggacaggcggtgggcggcctctgtcggcggcggcagcgggcggcggcggagggtgcttcaggtgaacgcgaggacggccggcgcggcgaagaacatcgaggtggaggtcgacaagccgctcggcctcaccctcggccagaagaccggcggcggcgtcgtcatcaccgctgtggattctggagggaacgcggcaagagcaggcctgaaatcaggtgaccaggtgctctacacaagtagcttctttggagatgaactatggcctgcagataagctggggttcaccaagacagccatccaggcaaagccagactctgtctactttgtggttagcaggggtgcacaagttgatgtgaagcgacttccgaaaaggccggcgcctccgagatttggccggaaattgacggaatcacaaaaggctagagcaacacacatttgccttgattgtggatacatatacttccttcccaagcctttcgaagaacagcctgatgaatatggctgcccacaatgcaacgcaccaaagaagcggttcgcgaaatatgatgcagaaaccgggagggcgattggtggtgcgctaccacctattacagtgatcgtcagtttgataatcggcattgccggagtaggggctttgcttgtatatggccttcaatag</cdnaseq>

Protein Sequence

<aaseq>MAATLSSAPAPSKHCSIVRAQHSPPPSILSSSTKTAFHGLSLVD RRWAASVGGGSGRRRRVLQVNARTAGAAKNIEVEVDKPLGLTLGQKTGGGVVITAVDS GGNAARAGLKSGDQVLYTSSFFGDELWPADKLGFTKTAIQAKPDSVYFVVSRGAQVDV KRLPKRPAPPRFGRKLTESQKARATHICLDCGYIYFLPKPFEEQPDEYGCPQCNAPKK RFAKYDAETGRAIGGALPPITVIVSLIIGIAGVGALLVYGLQ</aaseq>

Gene Sequence

<dnaseqindica>38..136#366..560#1259..1425#1616..1697#1804..1872#1979..2149#acaccacctgcactgctgccatcctctcaccaccgccatggctgccacactctcctctgctcctgccccctccaagcactgctccattgtcagagcccagcactcccctcccccttccatcctctcatcatcaactgtaagtgtgatacatatgcatatccattgattgattcttgatgtttttttttaatctcttcttgcttcattgattgattctatccattgatcgattcttgatgtttttttttctcttcttgtttcattgattgattcttgatgttttttttctcttcttgcttttctggtttcttgtgtgataatgtttgatgatattgttgatgatgatgatgctgtgctgagtgcagaagacggccttccatgggctgtcactggtggacaggcggtgggcggcctctgtcggcggcggcagcgggcggcggcggagggtgcttcaggtgaacgcgaggacggccggcgcggcgaagaacatcgaggtggaggtcgacaagccgctcggcctcaccctcggccagaagaccggcggcggcgtcgtcatcaccgtcagtatataacacagcttgcttccatacttccatgcatgatgccacctgttcttctttctctgcatgatcaaccaatggaaattttcactacttgattgctgtctcatcaagaacatactagattgctattcactgtatattccctgctcttgttttatcttcatgatccattaacagagaaaaaaaaggggcagcattgaattgctgtctcaagatcactatatttcctgaagaaattcttacatttttagaagaatttcttcaggaaaaatgagttaggacttattaggaatatcttcaacaagtcctaattcataaaactagttctttgccattagtggattaatttctcagaaaactataacaacctgttgaatcaacttctacatgagttaggacttatcaagaatatctgtttttttttttgaacgtgcaaaaggattgcacgtcaatatattagcaggaaaagagtttttgttacacaaagcaatcagccagactggcttatgcctaaaggggggggggggggggacttgaagctaggaactactacgacggttaaaaatgcaactccaaactcttttcctgctaaaaatatctgtttgccttcagtatgtacagcttgccttagagctggagatgcagaaagtgttataattagtgactagtaatagttcatttggcatttgctttaggctgtggattctggagggaacgcggcaagagcaggcctgaaatcaggtgaccaggtgctctacacaagtagcttctttggagatgaactatggcctgcagataagctggggttcaccaagacagccatccaggcaaagccagactctgtctactttgtggttagcaggtaaggacttatcctccccagcattacaattttttcgtaactttgaaatcctgtacatgcactcattatgcagttatattcaaaattcagacagtaatactagtagaaatatgtacttttcatggtaagtactttggatccttcaagttccttacatttcatctcctgctgtcatttcgcgccatctcaggggtgcacaagttgatgtgaagcgacttccgaaaaggccggcgcctccgagatttggccggaaattgacggaatcacaaaaggtaagctcaagatagttctgtctgcttctcagagcttatgctgcctgcaatcgtctgctctttccaacttttaagcctcaacctgcaaagttgtgaattgtcacaggctagagcaacacacatttgccttgattgtggatacatatacttccttcccaagcctttcgaagaacaggtaagattcacttcaattctttcacagagaatcagtcttttggcactcacagcccgcaaaatcaggtgtatccaacaattcaactagtgctttttatccatttcagcctgatgaatatggctgcccacaatgcaacgcaccaaagaagcggttcgcgaaatatgatgcagaaaccgggagggcgattggtggtgcgctaccacctattacagtgatcgtcagtttgataatcggcattgccggagtaggggctttgcttgtatatggccttcaataggctgccaatatcttcacaggtttttgactgtgtaacaagaagctcagcagattgctggtgcactctcttatctagcaagaaattctgagtgatatatatcaagggggaaaggaaaaacatgagttggaggctaatggctaaatgaaaaatcaaatcttcttatatgaatggagattaattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0162600, RefSeq:Os08g0162600