Os08g0163100

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Revision as of 12:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0163100| Description = Nuf2 family protein| Version = NM_001067598.1 GI:115474932 GeneID:4344736| Length = 3876 bp| Definition = Oryza sat...")
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Gene Name

Os08g0163100

Description

Nuf2 family protein

Version

NM_001067598.1 GI:115474932 GeneID:4344736

Length

3876 bp

Definition

Oryza sativa Japonica Group Os08g0163100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3721369..3725244

Sequence Coding Region

3721806..3721928,3722003..3722098,3722384..3722541,3722650..3722764,3722858..3722911
,3723190..3723297,3723841..3723930,3724340..3724519,3724611..3724923
,3725006..3725181

Expression

GEO Profiles:Os08g0163100

Genome Context

<gbrowseImage1> name=NC_008401:3721369..3725244 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3721369..3725244 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccaacttctccttccctccgttgacgccggagcagatcgcggaggcgctgcacacctacggcctcgcccccaccgccaacctccgcgcggaggacatcgccaacccgcagccggatctcctccccgccgtcatctccaacttcctcgccaccgtcgtcgaccccaccggcgccgacgacctcgacgggcagctaggattcgacgcgctggcgtcgctcgacaacccggagcactacatggagggcatccgggtactccgcctccacaagagggccagcgctttcctcgagtccatccagttccccgggttcacgctccgcgacctcctccgccccgacccgcgccgcctcgtgcaagtcctcagcgccctcatcaacttcctctactacagggacgacaagctcgccctcctgcagcccatcatccacgagttccccaacttggatgaacggtgcatggagctcaaggccaagcttgccgagcatcagaaggcaattgccgatcatgagctcgcggcgcaaatggaggagccgatggttcagcagatagaggcggaggtcaattccctgaagcaaaagcttgtagagtacaacaaaaagcagctggcactgagagccaacgcgactgcgatcaatgacaagaaagaggagacccacagaaagattgccaaaaatgattttgagttggtgaaactagcacaagaaaattccaagttattgccaaaaattgttgagtccccagaaaagcttcagagggcccttgaagagaagaaaacagctcgtgctgaattaaagaatgctgagaagatagcaacgcaaagtgtacaagagaaaactgccactttggagatatacagtaagggttatgaaaaattgtcgaagcattctactaaaatccaggctttacaagaacaggttactgcaactaaagcccttgagaaagaagtcaaagcgcgcaaaactaagattagtgatgaaagtgttgaaattatggcccttgacacaaagattattgaatgggatgggaaagtgcatgaaatggaggagcatgttaaagctaaagaaaaaaaaaaggatcaaatagtagcagacgaaaatcagaagctggctgctttgagttctgaagttgaatggaaactcaagtgtcttgaacctcgtgaaaggaaagtagaggaaacaattgcaaaggctactaaactatgtgcggaagttgattcaacaaggactgatgctgcagaagaactacagctgatatatgctaaatttcaacaaattggacatgcgtttacttgctacaaggataattttaagtctttcttggaacaagttgatgaggtgagcaaagaaactttagaaagtttagatcgtcaagctgtggagccattggacacatctgcaacattgtag</cdnaseq>

Protein Sequence

<aaseq>MASNFSFPPLTPEQIAEALHTYGLAPTANLRAEDIANPQPDLLP AVISNFLATVVDPTGADDLDGQLGFDALASLDNPEHYMEGIRVLRLHKRASAFLESIQ FPGFTLRDLLRPDPRRLVQVLSALINFLYYRDDKLALLQPIIHEFPNLDERCMELKAK LAEHQKAIADHELAAQMEEPMVQQIEAEVNSLKQKLVEYNKKQLALRANATAINDKKE ETHRKIAKNDFELVKLAQENSKLLPKIVESPEKLQRALEEKKTARAELKNAEKIATQS VQEKTATLEIYSKGYEKLSKHSTKIQALQEQVTATKALEKEVKARKTKISDESVEIMA LDTKIIEWDGKVHEMEEHVKAKEKKKDQIVADENQKLAALSSEVEWKLKCLEPRERKV EETIAKATKLCAEVDSTRTDAAEELQLIYAKFQQIGHAFTCYKDNFKSFLEQVDEVSK ETLESLDRQAVEPLDTSATL</aaseq>

Gene Sequence

<dnaseqindica>3317..3439#3147..3242#2704..2861#2481..2595#2334..2387#1948..2055#1315..1404#726..905#322..634#64..239#gaaattcctctcatttgggggaaaggcgtcggcggcgagagagcggcggcggcgaagaagaagatggcgtccaacttctccttccctccgttgacgccggagcagatcgcggaggcgctgcacacctacggcctcgcccccaccgccaacctccgcgcggaggacatcgccaacccgcagccggatctcctccccgccgtcatctccaacttcctcgccaccgtcgtcgaccccaccgggtgcgtgcgcgcgcctccccctcccccctctcgccggcgccgcccgctcggtgtttgtaattgttgggtggagattttgcagcgccgacgacctcgacgggcagctaggattcgacgcgctggcgtcgctcgacaacccggagcactacatggagggcatccgggtactccgcctccacaagagggccagcgctttcctcgagtccatccagttccccgggttcacgctccgcgacctcctccgccccgacccgcgccgcctcgtgcaagtcctcagcgccctcatcaacttcctctactacagggacgacaagctcgccctcctgcagcccatcatccacgagttccccaacttggatgaacggtgcatggagctcaaggccaagcttgccgaggtttgatgcttctggcatggcgcacagaattgctagctgggaatatacaatttaactttcctcttttgttttgattctgtcctgtgtacagcatcagaaggcaattgccgatcatgagctcgcggcgcaaatggaggagccgatggttcagcagatagaggcggaggtcaattccctgaagcaaaagcttgtagagtacaacaaaaagcagctggcactgagagccaacgcgactgcgatcaatgacaagaaagaggagacccacagaaaggtggtgcttacattgcaatcctacttccgcttttgactatatggtgctacaggtttcacctggccctgtagtattaggccaaattctcttctaggtctgagtgtccgactttctgacttcattatataacttgcagttctatattgtgttggttagaaatgtcagaagcgtccaggtcaaatagggatagaaaccagaaggtttgcagctttgccatttggacaagacgatctttgtgtataattggattgaaaaatagtttggaaaacccatttacattgtaacacactatcatttactcttgacatatgttaagctacactgaaatggttctcgctgacatgctgaaattttagatatgcagaaaagacgatttctcactaaacgccttgttattttctttatacagattgccaaaaatgattttgagttggtgaaactagcacaagaaaattccaagttattgccaaaaattgttgagtccccagaaaagcttcaggttcgatctgttcctcttttttctctattgccgctggcaggatggtcagtcttgtttaaatacctgaattacttcaccacaatcatagatggtttgtagtgatcgtgtgcaatggtttttgtcctctatatgtttagtttttagtgctgatctaggttttttttttcacataatctggtattaaagggacatttggatatttaccattctaaaactcttcaaaaagtttgtgagaaattgaaaaacaatgtaaatactattatttttgcatgcacaactgacattcttccaatgccgtagaacttcgtatttactctgtatattatttgttcattaaaaagttgcagttattgccagatgctctgtcttgattctcgaggacacactttcactagtttaatactcctcgcttctattcaactgctatttggaaatatatgcatatatttgaatcaatcagatcaacactttgttcttctaacagcatataaattatctttataagcttgcatcactaattttggattttattctgtattacagagggcccttgaagagaagaaaacagctcgtgctgaattaaagaatgctgagaagatagcaacgcaaagtgtacaagagaaaactgccactttggagatatacagtaaggtagtcttgttccactcttcattacaaaacaccgaaggtagaaggtaacttgtatttgccgattggccgtaacaatatctagcaaatatagggttacttcatctgtttcatattgattcaatttcctgatattccactgtattgtttggatcatctgtttgttgcggttgttggggctgacttgttgcaagagtggcacttggctacttactactgttccttgtgatgcttgacctactgatccattaataactgcagatgctgtctccattttgcagggttatgaaaaattgtcgaagcattctactaaaatccaggctttacaagaacaggtatggacatctgcaatgctagtttttcattatggagttggattaatcttaagatgaaaccctagtaactctcttatttattattgctgttaggttactgcaactaaagcccttgagaaagaagtcaaagcgcgcaaaactaagattagtgatgaaagtgttgaaattatggcccttgacacaaagattattgaatgggatgggaaaggttgtcaaactgtacttaccttttgtagtattgctgaatttgtgtatgctctttccattctgaaatactcttttcctcacgttattgcatgaatacctttttgattagtgcatgaaatggaggagcatgttaaagctaaagaaaaaaaaaaggatcaaatagtagcagacgaaaatcagaagctggctgctttgagttctgaagttgaatggaaactcaagtgtcttgaacctcgtgaaaggaaagtagaggaaacaattgcaaaggtgatgatttcgtcctgaaattttgtgtggttcaaactcaatgtctttgaaaacttctttttccctctgaatcattgatttctggtgttcacatgccacatgccacctaatacaatctaatgttccaaagaggcttcattgtatgcgctagtattggtccaggaacatatgctgaccggcctgactatctccctaatatgctaaagcctgtagattatattatcttatttgttaatactatgatcctatttcaactatacttgacatatttttctgtcattacaggctactaaactatgtgcggaagttgattcaacaaggactgatgctgcagaagaactacagctgatatatgctaaatttcaacaaattggacatgcggtatgtttttattagaggactatttcctataatcattgataaaattgttggttgctaatataatccttcttcagtttacttgctacaaggataattttaagtctttcttggaacaagttgatgaggtgagcaaagaaactttagaaagtttagatcgtcaagctgtggagccattggacacatctgcaacattgtagattgagaaaggttaggtcatccagcaattgacacccactttcttgttgcagttaacagcatttcagctgttattgtagcatttcaagctaagtttggtagacggcagttttgcaataccttgctttcttgctgtgctgtaatcctaatgaaactcatctctccttgttttgaatggcagagaactcctgcagccccgctccctgaaaagaggatagccacttggagaagatagcctagtgtgttttatgccacagctgtaaatttggaattgagatgtttttgttatcactggtgacagttatggaccttatggtctgtttgaacctcgtctgaccaattcggtgactgagaatacttcatcgaattatctgcagtagttatgtaaaaatgccttgaatcactctgatatggaaatgttggtgtcaggttgccaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0163100, RefSeq:Os08g0163100